Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00714 ATGGCGTCGTCTCTGATTCTGAATCCTGTGGCGACTTCTGAGCGATCGCGTGATTCATCCAGAAAGAAGAAGAAGAAGAAAGCAACAAGGGAAGATGATCGTCAAGATCAAGATCACATCAAATGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAATCAGGTCAGGATCAGTTCTCCTGAATCGACACCAAACGAAACGCCGCGCCGTGGCCGAGCGGTGCGGGAGGCTTCCGATACGGTTCTAGCCTTGACGGCAAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGTAATAAACACAATCGGCAGAAGGCGCGTGTGACCGGAAACAGCCGCACGAAGAAACCTAGTGTTAGCGTTTTGCGGTTTAGAGGGAAGGGATCACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATTCCGGCACTGGAGATGCAGATCCGTGTCATGAACGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCATCTTCTTCTGGTATCGATTCTTCTACCTGA 627 50.24 MASSLILNPVATSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQAQHQVYSSKLLRALNQVRISSPESTPNETPRRGRAVREASDTVLALTAKGRSRWSRAILTNRLKLKFRNKHNRQKARVTGNSRTKKPSVSVLRFRGKGSPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMNAIVNLVSSSSSSSSGIDSST 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6658962 6659588 + ClCG05G006645.1 Cla05g00714 272204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00714 208 MobiDBLite consensus disorder prediction 25 43 - -
Cla05g00714 208 MobiDBLite consensus disorder prediction 62 83 - -
Cla05g00714 208 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 8 207 - -
Cla05g00714 208 MobiDBLite consensus disorder prediction 1 47 - -
Cla05g00714 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 207 IPR044660 GO:0006355
Cla05g00714 208 CDD bHLH_AtIBH1_like 136 191 IPR044549 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01466 Cla-Chr2:29189932 Cla05g00714 Cla-Chr5:6658962 5.88E-37 dispersed
Cla05g00714 Cla-Chr5:6658962 Cla06g00420 Cla-Chr6:5128434 4.87E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00714 - - csv:105434845 328.176