Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00768 ATGGAGGACGATTTCGAGTTCCCGTCTGCAAGCAATGTAGACGAGGAAATGGGCTTGCCTGAGGACGAAGCGGAGAGCTCAGTTCTGAAGGTTGGCGAAGAGAAGGAGATTGGAAAGAATGGGCTGAAGAAGAAACTTGTTAAAGAAGGCGAAGGATGGGAAACTCCCGAGACTGGTGATGAAGTCGAAGTGCATTATACGGGAACCCTTCCTGATGGAACTCAATTCGATTCGAGCCGTGACCGAGGAACGCCCTTCAAGTTCAAGCTCGGGGAAGGGCAAGTGATTAAAGGATGGGATGAAGGTATTAGAACAATGAAAAAGGGTGAAAGTGCAGTTTTCACGATACCTCCTGAATTGGCCTATGGAGAGTCCGGCTCTCCTCCAACAATTCCACCGAATGCTACTCTTCAATTTGATGTTGAGCTACTTTCATGGCACAGCGTCAAAGACATCTGCCAAGATGGAGGAATCTTGAAAAAGATCCTTGTTAAAGGAGACGGCTGGGACAAACCGAAGGATTTGGACGAAGTCTCGGTTCTTTATGAGGCTCGTCTTGAAGATGGTACACTGATCTCAAAGTCTGATGGGGCCGAATTCACTGTTGAAAAAGGGCACTTCTGTCCTGCCTTGGCAACGTCCGTGAAGACCATGAAGAAGGGAGAGAAAGCTTTGTTGACTGTGAGGCCACAATATGCATTTGGGGAGTCTGGTAGGCCTGGAGCTGGAGAAGAAGGTGCTGTGCCTCCAAATGCCACACTTCAGATAACCCTTCAATTGGTTTCTTGGAAAACTGTTACAGAGGTTACTAAGGATAAGAAGGTCCTGAAGAAGACCCAGAAGGAGGGAGAAGGATATGAACAGCCAAATGAGGGAGCAGTGGTGCAAGTGAAACTAACCGGTAAACTGGCCGATGGGACGATTTTTACGAAAAAGGGTGATGATGAGAAGCCATTTGAGTTCAAAACTGACGAAGAACAAGTCATTGAAGGACTTGATTTGGCTGTGAGAAAGATGAAGAAGGGAGAAATTGCCTTGGTGACGATCCATCCACAATATGCTTTTGGATCTTCTGATTCACCCCAAGATCTAGCTGTAGTTCCTGCAAACTCAACTGTATATTATGAAGTTGAGCTAGTTTCTTTCGTCAAAGAAAAAGAATCTTGGGATCTGAACACAGCAGAAGAGAAAATAGAAGCAGCAGGTAAAAAGAAGGAAGAAGGGAATATTTTGTTCAAAGCTGGAAAATATGATAGAGCATCAAGGAGATATGAAAAGGCTGTGCGCTACATTGAATACGATACTTCTTTCAGCGATGAAGAGAAGCAACAGAGCAAGGCACTGAAGATTTCGTGCAACCTCAACAATGCTGCGTGCAAATTGAAAGTCAAAGATTACAAGCAAGCAGAGAAGCTCTGTACAAAGGTGTTGGAACTTGACAGTCGGAACGTGAAAGCTCTCTATAGAAGGGCCCAGGCATATATTCAACTTGTTGATCTTGATCTTGCTGAGCAGGATATCAAAAAAGCCCTTGAGATAGACCCAGATAACAGGGAAGTGAAGATCGAATACAGACAGTTGAAAGAGAAAGTGAGGGAATACAACAAGAGAGATGCCCAGTTCTATGGCAATATTTTTGCAAAAATGAACAAGCTGGAGCAGGCTGCTAATTCAGCAGGGAAGCAGGAGGCAGTGCCAATGACCATTGATAGCAAAGCTTAG 1722 44.89 MEDDFEFPSASNVDEEMGLPEDEAESSVLKVGEEKEIGKNGLKKKLVKEGEGWETPETGDEVEVHYTGTLPDGTQFDSSRDRGTPFKFKLGEGQVIKGWDEGIRTMKKGESAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWDKPKDLDEVSVLYEARLEDGTLISKSDGAEFTVEKGHFCPALATSVKTMKKGEKALLTVRPQYAFGESGRPGAGEEGAVPPNATLQITLQLVSWKTVTEVTKDKKVLKKTQKEGEGYEQPNEGAVVQVKLTGKLADGTIFTKKGDDEKPFEFKTDEEQVIEGLDLAVRKMKKGEIALVTIHPQYAFGSSDSPQDLAVVPANSTVYYEVELVSFVKEKESWDLNTAEEKIEAAGKKKEEGNILFKAGKYDRASRRYEKAVRYIEYDTSFSDEEKQQSKALKISCNLNNAACKLKVKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDIKKALEIDPDNREVKIEYRQLKEKVREYNKRDAQFYGNIFAKMNKLEQAANSAGKQEAVPMTIDSKA 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7316350 7320423 + ClCG05G007100.1 Cla05g00768 272258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00768 573 Gene3D - 265 389 IPR046357 GO:0003755
Cla05g00768 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 286 380 IPR001179 GO:0003755
Cla05g00768 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 144 IPR001179 GO:0003755
Cla05g00768 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 171 260 IPR001179 GO:0003755
Cla05g00768 573 SUPERFAMILY FKBP-like 28 151 - -
Cla05g00768 573 SMART tpr_5 484 517 IPR019734 GO:0005515
Cla05g00768 573 SMART tpr_5 450 483 IPR019734 GO:0005515
Cla05g00768 573 SMART tpr_5 401 434 IPR019734 GO:0005515
Cla05g00768 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 383 IPR001179 GO:0003755
Cla05g00768 573 Coils Coil 517 537 - -
Cla05g00768 573 Gene3D Tetratricopeptide repeat domain 390 544 IPR011990 GO:0005515
Cla05g00768 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755
Cla05g00768 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 264 IPR001179 GO:0003755
Cla05g00768 573 Gene3D - 32 150 IPR046357 GO:0003755
Cla05g00768 573 Pfam Tetratricopeptide repeat 484 517 IPR001440 GO:0005515
Cla05g00768 573 SUPERFAMILY FKBP-like 151 268 - -
Cla05g00768 573 SUPERFAMILY FKBP-like 269 399 - -
Cla05g00768 573 PANTHER PEPTIDYLPROLYL ISOMERASE 383 560 - -
Cla05g00768 573 PANTHER PEPTIDYLPROLYL ISOMERASE 276 383 - -
Cla05g00768 573 PANTHER PEPTIDYLPROLYL ISOMERASE 19 270 - -
Cla05g00768 573 SUPERFAMILY TPR-like 396 550 IPR011990 GO:0005515
Cla05g00768 573 Gene3D - 151 264 IPR046357 GO:0003755
Cla05g00768 573 MobiDBLite consensus disorder prediction 1 22 - -
Cla05g00768 573 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Cla05g00768 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 19 270 - -
Cla05g00768 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 276 383 - -
Cla05g00768 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 383 560 - -
Cla05g00768 573 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01818 Cla-Chr2:33281143 Cla05g00768 Cla-Chr5:7316350 4.57E-11 dispersed
Cla02g02331 Cla-Chr2:38423440 Cla05g00768 Cla-Chr5:7316350 4.04E-15 dispersed
Cla04g00749 Cla-Chr4:22513043 Cla05g00768 Cla-Chr5:7316350 4.26E-11 dispersed
Cla05g00768 Cla-Chr5:7316350 Cla09g00789 Cla-Chr9:7983284 0 dispersed
Cla06g00034 Cla-Chr6:389328 Cla05g00768 Cla-Chr5:7316350 4.52E-12 dispersed
Cla05g00768 Cla-Chr5:7316350 Cla10g01170 Cla-Chr10:26274891 1.70E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00768 K09571 - csv:101210041 1030.39