Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g00864 | ATGGTTTTTCATATGGGTATGGAGTTGAAACGCTTCTTTTTCATTTTCATTGTCTGCTTCGAGCTCTGCATTTTGAGCTCCAATGGCGCTACAGTCCAGAATGAGATTATTATCGAGAGAGAAAGCTTGATTTCTTTCAAAGCTTCGTTAGAGACCTCTGAAATTCTGCCATGGAACTCAACAGTTCCTCACTGCTTTTGGGCCGGAGTTTCTTGCCGATTCGGTCGAGTTACAGAGCTCTCTCTTTCATCTCTTTCACTCAAAGGCCAACTCTCACAGTCCCTTTTTAATATTTTGAGCCTCTCTGTTCTTGACCTTTCAAACAACTTCTTCTATGGCTCAATCCCACCTCAGGTATCCAATCTTCGGAGCTTGAAGGTGCTCGCTCTCGGCGGAAATCAGTTTTCCGGCGACTTCCCTATCGAACTCACTGAGTTGACTCGGTTGGAGAATCTCAAGTTGGGGACTAATTTATTCACAGGTAAAATCCCGCCGGAGCTTGGAAATTTGAAGCAGTTACGGACTCTTGACCTCTCCGGCAATGCCTTCGTCGGAAATGTTCCGCCCCACATCGGAAACTTGACGAAGATTTTATCCTTGGACCTCGGCAACAATCTTTTATCAGGTTCACTTCCATTGACCATCTTTACTGAGCTTACATCTTTAACTTCTCTGGACATTTCAAACAACTCGTTTTCGGGTTCAATCCCATCTGAAATTGGTAATCTAAAGCATTTGACTGGGCTTTATATCGGCATTAACCACCTTTCCGGTGAGTTGCCTCCTGAAGTTGGTAACCTTGTATTGCTGGAGAACTTTTTTTCGCCGTCTTGTTCTTTAACTGGTCCATTGCCTGACGAACTATCCAAGTTGAAATCATTGAGCAAACTGGATCTTTCATACAACCCACTTGGGTGTTCTATCCCTAAAACGATTGGTGAATTGCAGAACTTGACTATATTGAATCTGGTTTACACTGAGCTTAATGGTTCTATTCCTGCTGAGCTTGGGAGATGCAGAAATTTGAAAACATTGATGCTTTCTTTCAACTTTCTAACTGGGGAGTTGCCACAAGAGCTTTCTGAGCTTTCCATGTTGACATTTTCTGCTGAGAGGAATCAGCTTTCTGGGCCATTACCTTCCTGGCTTGGCAAATGGGATCATGTCGATTCTATTTTACTTTCGAGTAATCGGTTCACCGGCGAAATCCCACCTGAGATTGGAAATTGCTTGATGCTTAATCACCTTAGTTTGAGCAATAACTTGTTGACAGGTCCAATTCCTAAAGAAATTTGTAATGCTGTATCCTTGACAGAGATTGATCTTGACAGTAATTTCCTTTCGGGTACGATTGATGACACATTTGTAATGTGTAAAAACCTTACGCAGTTGGTCTTGGTTGACAACCAGATTGTTGGTTCCATACCAGAGTACTTCTCAGACCTTCCCCTACTGGTAATCAACCTTGACTCCAACAATTTTACAGGTTCTTTACCGACAAGTATATGGAACTCAATGGATTTGATGGAATTTTCTGCTGCAAATAACCAGTTAGAGGGTCATCTCCCTCCAGAAATTGGTTATGCAGCTTCCCTTGAGAGGCTTGTTCTCAGCAACAACAGGCTGACAGGCATAATACCAAATGAGATTGGTAATCTCACAGCCCTTTCTGTTCTAAATTTGAATTCAAATCTGCTTGAAGGAACTATTCCTGCCATGCTTGGAGATTGCAGTGAACTTACCACATTGGACCTTGGAAACAACAGTCTAATTGGGTCGATTCCAGAAAGACTTGCAGACCTTACTGAATTACAGTGCCTAGTTCTTTCACACAACAATTTATCTGGAGAAATACCTTCCAATCCGTCTGCTTATTTTCGACAGTTGACAATTCCTGATTTGAGCTTTGTTCAGCATCATGGTGTTTTTGATCTGTCTCATAATAGATTGTCTGGTACCATACCTGATGAACTGGGGAACTGTGTCGTTGTGGTAGATCTTTTACTCAACAATAATCTACTTTCTGGAGCAATTCCTAGATCTCTCTCAAAGTTAACAAACCTCACAACCTTGGATTTATCTGGCAATATGCTTACTGGTCCTATTCCTGCAGAGATTGGCAATGCTCTCAAGCTCCAAGGCCTGTATCTTGGGAATAATCACCTCATGGGAATGATCCCTGAAAGCTTCAGTCATTTGAGTAGCTTGGTAAAGTTGAACTTAACTGGTAATAAATTATCTGGTTCGGTTCTGAAAACTTTTGGTGGTCTGAAAGCTCTAACTCATTTGGATTTAAGTTGTAATGAGTTGGATGGTGATCTTCCCTCTTCTCTGTCCAGCATGTTGAATCTTGTGGGGCTTTATGTACAGGAGAACAGGCTTTCTGGTCAGGTTGTTGAACTTTTCCCAAGTTCCATGACATGGAAGATTGAAACTTTGAATTTGAGTAATAACTATTTTGAGGGTGTTCTTCCACGAACATTGGGCAATCTTTCATACTTGACGACTTTGGATCTTCATGGAAATAAGTTCACAGGGCCAATCCCTTCAGATCTTGGGGATCTTATGCAACTTGAATACTTTGATGTTTCGAACAACAGGCTTTCAGGGGAGATTCCAGACAAAATATGCAGCCTCATCAATATGTTTTATCTGAATTTAGCAGAAAACAGTCTTGAAGGGCCAATTCCGAGAAGTGGCATTTGCCAGAATCTATCCAAAAGTTCACTTGCCGGTAACAAGGACCTTTGTGGGAGAATCCTGGGTTTCAATTGCCGGATCAAAAGCTTAGAAAGATCTGCAGTCTTGAATGCTTGGAGTGTTGCTGGGATTATCATTGTTAGCGTTCTTATTGTTCTAACTGTGGCGTTTGCCATGAGAAGACGGATTATTAGAAGACAGAGAGATAATGATCCAGAGGAAATGGAGGAAAGCAAATTAAACAGTTTCATAGACCCCAATCTCTATTTCTTAAGCAGCAGCAGATCAAAAGAGCCTTTAAGCATCAATGTGGCCATGTTCGAGCAGCCCCTTCTGAAGTTAACTTTGGTTGATATCCTGGAAGCAACCAATAACTTCTGTAAAACAAACATTATTGGAGATGGAGGATTCGGGACCGTCTACAAGGCCACTTTGCCTGATGGAAAAGTTGTTGCTGTGAAGAAGCTAAGCGAAGCGAAAACACAGGGGAATAGGGAATTCATTGCTGAAATGGAAACTATAGGCAAAGTAAAGCACCATAATCTTGTTCCATTGCTTGGCTACTGTTCTCTTGGGGAGGAGAAGCTTCTTGTGTATGAGTATATGGTGAACGGTAGCTTGGATCTTTGGCTGAGAAACCGAACTGGTACTCTCGAAGTCCTTAACTGGGAGACTCGCTTCAAAGTCGCTTCAGGCGCAGCCCGTGGACTGGCATTTCTTCACCATGGATTCATACCCCATATCATTCACAGAGATGTTAAAGCAAGCAATATACTCCTCAACCAAGACTTTGAACCAAAAGTTGCTGACTTTGGATTGGCAAGATTGATCAGTGCTTGTGAGACTCATGTCACGACTGAGATTGCTGGAACCTTTGGTTACATCCCACCGGAGTACGGGCAGAGTGGGCGGTCGACTACCAAAGGCGACGTTTACAGCTTCGGTGTGATTCTACTGGAATTGGTAACTGGGAAGGAACCAACTGGACCTGATTTTAAGGAGATTGAGGGTGGAAATTTGGTTGGCTGGGTGTTTCAGAAGATCAACAAGGGTCAGGCTGCAGATGTTCTGGATGCCACAGTTCTGAATGCTGATTCCAAGCATATGATGCTTCAAACTCTTCAGATTGCTTGTGTTTGCTTGTCAGAAAATCCTGCTAATAGACCTTCCATGCTTCAGGTATTGAAGTTTCTTAAAGGGATCAAAGATGAGTAA | 3915 | 42.4 | MVFHMGMELKRFFFIFIVCFELCILSSNGATVQNEIIIERESLISFKASLETSEILPWNSTVPHCFWAGVSCRFGRVTELSLSSLSLKGQLSQSLFNILSLSVLDLSNNFFYGSIPPQVSNLRSLKVLALGGNQFSGDFPIELTELTRLENLKLGTNLFTGKIPPELGNLKQLRTLDLSGNAFVGNVPPHIGNLTKILSLDLGNNLLSGSLPLTIFTELTSLTSLDISNNSFSGSIPSEIGNLKHLTGLYIGINHLSGELPPEVGNLVLLENFFSPSCSLTGPLPDELSKLKSLSKLDLSYNPLGCSIPKTIGELQNLTILNLVYTELNGSIPAELGRCRNLKTLMLSFNFLTGELPQELSELSMLTFSAERNQLSGPLPSWLGKWDHVDSILLSSNRFTGEIPPEIGNCLMLNHLSLSNNLLTGPIPKEICNAVSLTEIDLDSNFLSGTIDDTFVMCKNLTQLVLVDNQIVGSIPEYFSDLPLLVINLDSNNFTGSLPTSIWNSMDLMEFSAANNQLEGHLPPEIGYAASLERLVLSNNRLTGIIPNEIGNLTALSVLNLNSNLLEGTIPAMLGDCSELTTLDLGNNSLIGSIPERLADLTELQCLVLSHNNLSGEIPSNPSAYFRQLTIPDLSFVQHHGVFDLSHNRLSGTIPDELGNCVVVVDLLLNNNLLSGAIPRSLSKLTNLTTLDLSGNMLTGPIPAEIGNALKLQGLYLGNNHLMGMIPESFSHLSSLVKLNLTGNKLSGSVLKTFGGLKALTHLDLSCNELDGDLPSSLSSMLNLVGLYVQENRLSGQVVELFPSSMTWKIETLNLSNNYFEGVLPRTLGNLSYLTTLDLHGNKFTGPIPSDLGDLMQLEYFDVSNNRLSGEIPDKICSLINMFYLNLAENSLEGPIPRSGICQNLSKSSLAGNKDLCGRILGFNCRIKSLERSAVLNAWSVAGIIIVSVLIVLTVAFAMRRRIIRRQRDNDPEEMEESKLNSFIDPNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATNNFCKTNIIGDGGFGTVYKATLPDGKVVAVKKLSEAKTQGNREFIAEMETIGKVKHHNLVPLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGTLEVLNWETRFKVASGAARGLAFLHHGFIPHIIHRDVKASNILLNQDFEPKVADFGLARLISACETHVTTEIAGTFGYIPPEYGQSGRSTTKGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVFQKINKGQAADVLDATVLNADSKHMMLQTLQIACVCLSENPANRPSMLQVLKFLKGIKDE | 1304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8569756 | 8573670 | + | ClCG05G007920.2 | Cla05g00864 | 272354 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g00864 | 1304 | Gene3D | Ribonuclease Inhibitor | 216 | 450 | IPR032675 | - | |
Cla05g00864 | 1304 | Gene3D | Ribonuclease Inhibitor | 628 | 928 | IPR032675 | - | |
Cla05g00864 | 1304 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1102 | 1304 | - | - | |
Cla05g00864 | 1304 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1148 | 1160 | IPR008271 | GO:0004672|GO:0006468 | |
Cla05g00864 | 1304 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 809 | 897 | - | - | |
Cla05g00864 | 1304 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 138 | 347 | - | - | |
Cla05g00864 | 1304 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 77 | 140 | - | - | |
Cla05g00864 | 1304 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 958 | 1304 | - | - | |
Cla05g00864 | 1304 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 350 | 451 | - | - | |
Cla05g00864 | 1304 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 455 | 790 | - | - | |
Cla05g00864 | 1304 | Pfam | Leucine rich repeat N-terminal domain | 39 | 72 | IPR013210 | - | |
Cla05g00864 | 1304 | Gene3D | Ribonuclease Inhibitor | 38 | 144 | IPR032675 | - | |
Cla05g00864 | 1304 | Gene3D | Ribonuclease Inhibitor | 566 | 627 | IPR032675 | - | |
Cla05g00864 | 1304 | SUPERFAMILY | L domain-like | 389 | 620 | - | - | |
Cla05g00864 | 1304 | Gene3D | Ribonuclease Inhibitor | 145 | 215 | IPR032675 | - | |
Cla05g00864 | 1304 | ProSiteProfiles | Protein kinase domain profile. | 1026 | 1304 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00864 | 1304 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 809 | 897 | - | - | |
Cla05g00864 | 1304 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 77 | 140 | - | - | |
Cla05g00864 | 1304 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 350 | 451 | - | - | |
Cla05g00864 | 1304 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 958 | 1304 | - | - | |
Cla05g00864 | 1304 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 455 | 790 | - | - | |
Cla05g00864 | 1304 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 138 | 347 | - | - | |
Cla05g00864 | 1304 | Gene3D | Phosphorylase Kinase; domain 1 | 989 | 1101 | - | - | |
Cla05g00864 | 1304 | CDD | STKc_IRAK | 1032 | 1301 | - | - | |
Cla05g00864 | 1304 | Pfam | Protein tyrosine and serine/threonine kinase | 1030 | 1298 | IPR001245 | GO:0004672|GO:0006468 | |
Cla05g00864 | 1304 | SMART | serkin_6 | 1026 | 1298 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00864 | 1304 | Pfam | Leucine rich repeat | 436 | 494 | IPR001611 | GO:0005515 | |
Cla05g00864 | 1304 | Pfam | Leucine rich repeat | 555 | 614 | IPR001611 | GO:0005515 | |
Cla05g00864 | 1304 | Pfam | Leucine rich repeat | 810 | 868 | IPR001611 | GO:0005515 | |
Cla05g00864 | 1304 | Pfam | Leucine Rich Repeat | 760 | 780 | IPR001611 | GO:0005515 | |
Cla05g00864 | 1304 | Pfam | Leucine Rich Repeat | 221 | 243 | IPR001611 | GO:0005515 | |
Cla05g00864 | 1304 | Pfam | Leucine Rich Repeat | 531 | 553 | IPR001611 | GO:0005515 | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 170 | 196 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 685 | 717 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 757 | 786 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 458 | 484 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 291 | 317 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 577 | 603 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 855 | 881 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_sd22_2 | 219 | 245 | - | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 711 | 732 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 553 | 577 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 601 | 624 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 170 | 193 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 733 | 756 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 194 | 218 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 98 | 122 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 685 | 709 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 291 | 315 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 757 | 781 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 530 | 552 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 219 | 243 | IPR003591 | - | |
Cla05g00864 | 1304 | SMART | LRR_typ_2 | 831 | 855 | IPR003591 | - | |
Cla05g00864 | 1304 | Coils | Coil | 1295 | 1304 | - | - | |
Cla05g00864 | 1304 | SUPERFAMILY | L domain-like | 57 | 367 | - | - | |
Cla05g00864 | 1304 | Gene3D | Ribonuclease Inhibitor | 451 | 549 | IPR032675 | - | |
Cla05g00864 | 1304 | SUPERFAMILY | L domain-like | 628 | 918 | - | - | |
Cla05g00864 | 1304 | SUPERFAMILY | Protein kinase-like (PK-like) | 1007 | 1298 | IPR011009 | - | |
Cla05g00864 | 1304 | PRINTS | Leucine-rich repeat signature | 222 | 235 | - | - | |
Cla05g00864 | 1304 | PRINTS | Leucine-rich repeat signature | 685 | 698 | - | - | |
Cla05g00864 | 1304 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1032 | 1055 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01557 | Cla-Chr1:30210928 | Cla05g00864 | Cla-Chr5:8569756 | 7.08E-67 | dispersed | |
Cla05g00864 | Cla-Chr5:8569756 | Cla05g00378 | Cla-Chr5:3458421 | 1.07E-87 | dispersed | |
Cla06g01234 | Cla-Chr6:25597635 | Cla05g00864 | Cla-Chr5:8569756 | 1.84E-10 | dispersed | |
Cla08g00888 | Cla-Chr8:21363945 | Cla05g00864 | Cla-Chr5:8569756 | 4.62E-73 | dispersed | |
Cla09g01811 | Cla-Chr9:35672910 | Cla05g00864 | Cla-Chr5:8569756 | 3.96E-06 | dispersed | |
Cla11g00084 | Cla-Chr11:1098058 | Cla05g00864 | Cla-Chr5:8569756 | 1.63E-42 | dispersed | |
Cla11g00667 | Cla-Chr11:7776300 | Cla05g00864 | Cla-Chr5:8569756 | 5.94E-11 | dispersed | |
Cla05g00864 | Cla-Chr5:8569756 | Cla06g00736 | Cla-Chr6:9562383 | 1.25E-17 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80552 | PF07714 | PK_Tyr_Ser-Thr | 9.40E-46 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g00864 | - | - | csv:101215443 | 2372.43 |