Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g00887 | ATGGAGTTGATTTGTGTGTTGATTATGTTAATCATGTGGGTGATTAGGGTTTCAATCATGGTTTTGTTTGGGAAAGTTGTGGTTTCATGGTGGATTTTGCCTATTTTGGCTCATAAAAATTTGAAGAGAAATGGATTTGAAGGTCCTTCTCCTACTTTCCCTCTTGGAAATATTACAGAGATGAAGAAGATAATGAAAGCTGCTGCAGCCATTAGTGGATCATCATCTACCTCCTTTGCTTCTTCAAATAATTTCTCCCATGATATTCATTCAACTATTTTCCCTCACTTTGCTCAATGGCAGAATTCTTATGGGAAGAAGTTTGTATATTGGTTGGGGACAGAGCCATTTTTGTACATAGCAGACCCACAGCTTGTGAAGAAGATATCTGAAGCTGTGATGGGGAAGAATTGGGGGAAGCCAGCTGTCTTCAGAAACGACCGAGAACCGATGTTCGGCGATGGCCTCGTCATGACCGAAGGTGACGACTGGATTCGCCATCGCCATATCCTCACTCCCGCCTTCAACCCCGCCAATTTGAAGGCAATGACAAAGTTCATGGTGGAGTCCACCACTAAAATGGTAAAAGAGTGGAGAAGCCTCGTAAACTCCGGGCAACCGGAAATCGACGTGGAAAGAGAAATTACGGCAACCGCCGGCGACATAATCGCAAAGGCAAGCTTCGGAATGTCGAGTGGCGGCGGGGGGGAAGAGGCGTTGAACAACCTGAGAGCTCTTCAGTTAACTCTGTTCTCCAACAGCAGCTACGTTGGGGTCCCATTCAGCAGTGTATTTCTGTACCCTGCCCGAACCCTAGCCGCCAAGAAACTGGGTGCCCAAATCGACCGCCTCTTCTTTTCCATCATATCTCACAGGAAACTCTCCCCCGATTCCGATTCCGATTTGCTGACTCGGTTGATTCAGAGTCAAAGCAACCAGAGGGTGGCCCTGACCCCGAGAGAAGTGGTGGACGAGTGTAAGACATTCTTCTTCGGCGGCCATGAGACGACGGCGCTGGCCATCAGTTGGACGCTGCTGCTGTTGGCCACTCGCCCGGAATGGCAAAACATTTTACGAGAGGAGATTAAAGAAGTGGTCGGAGATAAAGATATTGATTTCTCCATGCTTTCTTCACTCAAAAAGATGGGATGGGTGTGGAATGAGGTACTTAGGCTATACCCCTCAGCCCCAAACATACAAAGACAAGCAAAAGGAGACATTGATTTAGGGGACATGAAGATCCCAAAAGGGACCAACATATGGATAGACATCGTCGCAATGCATCACGACTCGACCCTATGGGGCAACGACGTTAACGAGTTCAAGCCAGAGAGGTTCCAACAAGACACCATTCATGGCGGGTGCAACCACAAGATGGGATATTTGCCTTTTGGTTTTGGAGGGAGAATGTGCATTGGTAGAAACTTATCTTCTATGGAGTATAAGATTGTCCTAACCCTAATTCTTTCTACATTTTCGCTCTCTCTTTCTCCTTCTTACTCTCATTCTCCTGCTAATTTGCTCTCTCTGAGACCTGCCCATGGCATTCCTCTCATTCTAAGCCCGCTTTATCCTTAA | 1578 | 46.83 | MELICVLIMLIMWVIRVSIMVLFGKVVVSWWILPILAHKNLKRNGFEGPSPTFPLGNITEMKKIMKAAAAISGSSSTSFASSNNFSHDIHSTIFPHFAQWQNSYGKKFVYWLGTEPFLYIADPQLVKKISEAVMGKNWGKPAVFRNDREPMFGDGLVMTEGDDWIRHRHILTPAFNPANLKAMTKFMVESTTKMVKEWRSLVNSGQPEIDVEREITATAGDIIAKASFGMSSGGGGEEALNNLRALQLTLFSNSSYVGVPFSSVFLYPARTLAAKKLGAQIDRLFFSIISHRKLSPDSDSDLLTRLIQSQSNQRVALTPREVVDECKTFFFGGHETTALAISWTLLLLATRPEWQNILREEIKEVVGDKDIDFSMLSSLKKMGWVWNEVLRLYPSAPNIQRQAKGDIDLGDMKIPKGTNIWIDIVAMHHDSTLWGNDVNEFKPERFQQDTIHGGCNHKMGYLPFGFGGRMCIGRNLSSMEYKIVLTLILSTFSLSLSPSYSHSPANLLSLRPAHGIPLILSPLYP | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8738876 | 8742300 | + | ClCG05G008110.1 | Cla05g00887 | 272377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g00887 | 525 | PRINTS | P450 superfamily signature | 471 | 482 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | P450 superfamily signature | 462 | 471 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | P450 superfamily signature | 384 | 395 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | P450 superfamily signature | 332 | 349 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 464 | 473 | IPR017972 | GO:0005506|GO:0016705 | |
Cla05g00887 | 525 | PANTHER | CYTOCHROME P450 FAMILY 72 PROTEIN | 14 | 519 | - | - | |
Cla05g00887 | 525 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 14 | 519 | - | - | |
Cla05g00887 | 525 | SUPERFAMILY | Cytochrome P450 | 90 | 522 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | Pfam | Cytochrome P450 | 92 | 499 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | Gene3D | Cytochrome P450 | 81 | 520 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | E-class P450 group I signature | 341 | 367 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | E-class P450 group I signature | 321 | 338 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | E-class P450 group I signature | 471 | 494 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | E-class P450 group I signature | 461 | 471 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00887 | 525 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g00435 | Cla05g00887 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00887 | Cla-Chr5:8738876 | Cla05g01247 | Cla-Chr5:14366775 | 5.32E-112 | dispersed | |
Cla01g00435 | Cla-Chr1:4707730 | Cla05g00887 | Cla-Chr5:8738876 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g00887 | - | - | csv:101220942 | 868.996 |