Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00912 ATGGCGGCCGGCCTCTCCGCCGCCTTAGTGCCCAAACCACTCCATCTCTTCCTTACTTCCTCCCATCTCTCCCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTCCTGTCTTCCGGAACAGTAGATTCCAATGGAAGATGCGGAGAAAAACTCTGTTCACTGTCTGTGTACTCGTTGAGGATCAAAATAGTTCCGGTGAGGTGGAGAATCTCTCCGATGAAGGATCGCCGATTGTAATCCCTCAGATCCCATCGCCTCATGTTTCAGAAAGATTAGCAAGGAAGAAATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTGGGGATGGAGTTCTGGGCGAGATGGGCTCATAGGGCTCTCTGGCACTCTTCCTTATGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTGTCAACGCTGTGCCCGCCATAGCTCTTCTTTCTTACGGCTTCTTCCATAAAGGCCTTGTTCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTCGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCATAAAAGATTCCCTGTGGGTCCCATCGCCAACGTCCCCTATTTCAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCAGACAAGTTCAACGGTGTGCCATATGGGCTGTTTTTGGGTCCGAAGGAATTAGAGGAAGTGGGAGGCCTAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATTGACGGCCCCAAAATCAAACCATGGTTCTTCATCAACCAATATTATGTGA 951 49.21 MAAGLSAALVPKPLHLFLTSSHLSPKPRTPFLFPPPVFRNSRFQWKMRRKTLFTVCVLVEDQNSSGEVENLSDEGSPIVIPQIPSPHVSERLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHSSLWHMHESHHKPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEINRRIKLTAPKSNHGSSSTNIM 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9041158 9044268 - ClCG05G008380.1 Cla05g00912 272402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00912 316 Pfam Fatty acid hydroxylase 149 276 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cla05g00912 316 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 15 302 IPR045019 GO:0016491
Cla05g00912 316 PANTHER BETA-CAROTENE HYDROXYLASE 15 302 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g00235 Cla05g00912 CCT
Cla01g00235 Cla05g00912 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00235 Cla-Chr1:2378718 Cla05g00912 Cla-Chr5:9041158 5.79E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00912 K15746 - csv:101212140 584.719