Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cla05g01002	ATGAGATCTCTACTGGTCTCAGAGGTGATGGTGGTTAATCTTGTCAAACCGTCTTTCCTCAAATGGATATTATTGAGTTGCTTGCTTTCTTTCTCGCTGGCTCTGAAACAGACTAATAAAGTCTGTGATTCAAAAGATTTACTGGCATTGAGGGGCTTTGTGAATAGCCTTGCAAATAGTTCTGTTCTCTCTGTATGGTTAAATGAATCCAACTGCTGCAATTGGGATGGTGTGGATTGTGGATATGATGGCAACAGCTCGCGCACTAACAGAGTTACCAGGTTAGAGCTGCCTAATATGAATCTGAAAGGCAAGATTTCACAATCACTTGGTGGTTTAGATCAGTTAATTTGGCTGAATCTATCATACAATCAGCTTGAAGGTGTATTGCCAACAGAACTCTCAAGCTTGAAGCAACTCCAGGTTTTGGATTTGAGTTACAATAAATTGTCAGGACCAGTCACCAATGCAACTTCAGGATTGAAATCTGTTCACGTTCTGAATATTTCAAGCAATTCATTCATTGGGGATTTTCCCCAGCTTGTGGGTTTTCAAAATCTTGTTGCCTTCAACATAAGTAACAATTCTTTCACGGGCCGGTTAGCTTCACAGATTTGCAATTCCTCCATCATGATTCAGGTTGTTGATATTTCACTGAACCGAATATCTGGAAATCTTCAAGGTTTGGACAATTGCAGCAAATCTCTCAAACATTTTCGTGCAGACAGTAACTTCCTTACTGGCCATCTGCCAGATTCGTTGTATTCATTATCATCCATGGAGTATTTCTCAATCCCTGGGAACAGCTTCTTTGGCCAATTAAGCATGGAACTGAGTAAGCTTTCTAGGCTTAAATCCTTTATAGTATTTGGAAACAAATTTTCTGGTGAACTTCCAAATGTGTTTGGTAATTTTTCAGAACTACAGGAGTTAGTTGCACACTCCAACTTGTTCTCTGGATTATTGCCTTCATCTCTGTCATTGTGCTCAAAGCTCAGAGTGTTTGATCTTAGAAATAATTCTTTAACTGGTACTATAGATCTCAATTTTTCTAGGCTACCAAATCTTCAAATGCTTGATCTAGCCTCGAATCACTTTTCTGGGGCCCTACCAAATTCTCTATCTGATTGCCATGAACTGAAAACTCTTAGCCTTGCCAAAAACAAGTTAACTGGTCAAATTCCTCGAAATTATGCAAAGCTTTCCTCTCTGTCCTTTCTATCTTTGTCAAACAACAGTATCATAGACTTGAGTGGTGCACTATCTATTTTACAAAATTGCAGAAATCTGACTGTTCTTATTCTTACAAAGAACTTTCGTAATGAGGTACTTCCACAGAGTGAAACTGTTTTCAACAACTTGATGCTTTTGGCATTTGGTAACTGTGGTCTGAGAGGACAAATTCCAGGTTGGTTAATAGGTTGCAAGAAATTAAGCATCCTCGACTTGTCGTGGAATCACTTAAATGGAAGTATCCCTGCTTGGATTGGTCAGCTGGAAAATTTGTTTTATTTGGACTTATCCAACAATTCTCTGACAGGAGAAATCCCAAAAAGCTTGACACAGATGAAAGCACTAATTTCCAGAAACGGCAGCTTGTCGGGTTCCACATCATCTGCTGGAATCCCCCTTTTTGTCAAACGAAATCAAAGTGCTACTGGTTTGCAATACAACCAAGCGTCAAGCTTTCCACCATCGATTTACTTGAGCTACAACAGAATTAATGGAACTATTTTTCCGGAAATTGGCAGATTAAAATGGCTGCATGTCTTGGATTTGAGTAGGAATAATATTACTGGGTCCATACCGAGCACCATATCAGAGATGGAGAACTTGGAAACATTAGATTTGTCGAATAATGATCTTTATGGACAAATTCCACCATCACTCAACAAGCTCACCTTCTTGTCAAAGTTTAGCGTGGCAAATAATCACTTGGAGGGACCAATTCCTAATGGAGGCCAATTCCTAAGCTTTCCCAGCTCCTGCTTTGATGGTAATACAGCACTTTGTGGGGAAATTGACAACCCTTGTCATTCTGTTGATGGGTTAGAAACAAAACCCGAAACCAACAATTACTCAAAGAGAAAAGTTAATAGAAGCATCATTCTTTGCCTTACAGTCGGTGCAGCTGCAGCAATCCTCCTGCTCCTTACAGTGGTTTTACTCAAAATGTCCAGGAAAGATGTTGGAGATCGACGAAATAACAGGTTTGATGAGGAATTTGACAGGCCTGACAGGTTATCTGGAGCTCTTGGATCGTCAAAGTTGGTGCTCTTTCAGAATTCAGAATGCAAGGATCTTACAGTTGCAGAGTTGTTAAAAGCTACTTGCAATTTCAACCAAGCGAACATAATAGGCTGTGGTGGATTTGGCCTGGTTTACAAAGCCAGCCTTCCCAATGGTTCAAAAGCTGCAGTCAAGAGGCTTACAGGAGATTGTGGTCAGATGGAACGGGAATTCCAAGCTGAAGTAGAAGCTCTTTCTCGAGCACAGCATAAGAATCTTGTTTCTCTTCAAGGTTACTGCAAACATGGAAATGACAGGCTATTAATTTACTCCTACATGGAAAATGGAAGTTTGGACTACTGGCTTCACGAGGTTGTTGATGATGATTCAATACTAAAATGGGAAGCAAGACTCAAAATCGCACAGGGTGCTGCTCATGGATTGGCTTACTTGCATAAGGAATGTCAGCCCAACATAATCCACCGAGATGTAAAATCAAGCAACATACTTCTAGATGACAGATTTGAGGCTCATTTAGCTGATTTTGGCCTTTCAAGATTACTCCGGCCATATGACACTCATGTTACGACGGACTTGGTTGGGACTTTGGGTTATATTCCTCCTGAATACAGCCAGACATTAACTGCAACTTGCAGGGGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGGTCGGAGGCCTGTAGAGGTATGCAAAGGTAAAGCCTGCAGGGATCTGGTGTCTTGGGTGATTCAAAAAAAATCAGAGAAGAGAGAAGAGGAGATTATTGATCCTGCAATTTGGGACACTAATAGCAAAAAACAGATTTTAGAGGTTCTTGGTATTACTTGTAAATGCATAGACCAAGATCCAAGGAAGAGACCTTCGATTGAAGAAGTTTCTTCATGGCTAGATGGTGTTACGTTGTAG	3171	40.37	MRSLLVSEVMVVNLVKPSFLKWILLSCLLSFSLALKQTNKVCDSKDLLALRGFVNSLANSSVLSVWLNESNCCNWDGVDCGYDGNSSRTNRVTRLELPNMNLKGKISQSLGGLDQLIWLNLSYNQLEGVLPTELSSLKQLQVLDLSYNKLSGPVTNATSGLKSVHVLNISSNSFIGDFPQLVGFQNLVAFNISNNSFTGRLASQICNSSIMIQVVDISLNRISGNLQGLDNCSKSLKHFRADSNFLTGHLPDSLYSLSSMEYFSIPGNSFFGQLSMELSKLSRLKSFIVFGNKFSGELPNVFGNFSELQELVAHSNLFSGLLPSSLSLCSKLRVFDLRNNSLTGTIDLNFSRLPNLQMLDLASNHFSGALPNSLSDCHELKTLSLAKNKLTGQIPRNYAKLSSLSFLSLSNNSIIDLSGALSILQNCRNLTVLILTKNFRNEVLPQSETVFNNLMLLAFGNCGLRGQIPGWLIGCKKLSILDLSWNHLNGSIPAWIGQLENLFYLDLSNNSLTGEIPKSLTQMKALISRNGSLSGSTSSAGIPLFVKRNQSATGLQYNQASSFPPSIYLSYNRINGTIFPEIGRLKWLHVLDLSRNNITGSIPSTISEMENLETLDLSNNDLYGQIPPSLNKLTFLSKFSVANNHLEGPIPNGGQFLSFPSSCFDGNTALCGEIDNPCHSVDGLETKPETNNYSKRKVNRSIILCLTVGAAAAILLLLTVVLLKMSRKDVGDRRNNRFDEEFDRPDRLSGALGSSKLVLFQNSECKDLTVAELLKATCNFNQANIIGCGGFGLVYKASLPNGSKAAVKRLTGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCKHGNDRLLIYSYMENGSLDYWLHEVVDDDSILKWEARLKIAQGAAHGLAYLHKECQPNIIHRDVKSSNILLDDRFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKACRDLVSWVIQKKSEKREEEIIDPAIWDTNSKKQILEVLGITCKCIDQDPRKRPSIEEVSSWLDGVTL	1056

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
5	10080430	10083600	-	ClCG05G009270.1	Cla05g01002	272492

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cla05g01002	1056	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	456	524	-	-
Cla05g01002	1056	PANTHER	PHYTOSULFOKINE RECEPTOR 2	568	625	-	-
Cla05g01002	1056	SMART	serkin_6	780	1051	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cla05g01002	1056	ProSiteProfiles	Protein kinase domain profile.	780	1051	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cla05g01002	1056	PANTHER	PHYTOSULFOKINE RECEPTOR 2	282	446	-	-
Cla05g01002	1056	Pfam	Leucine rich repeat	354	414	IPR001611	GO:0005515
Cla05g01002	1056	Pfam	Leucine rich repeat	567	622	IPR001611	GO:0005515
Cla05g01002	1056	Pfam	Leucine rich repeat	91	150	IPR001611	GO:0005515
Cla05g01002	1056	SMART	LRR_typ_2	137	160	IPR003591	-
Cla05g01002	1056	SMART	LRR_typ_2	353	376	IPR003591	-
Cla05g01002	1056	SMART	LRR_typ_2	499	523	IPR003591	-
Cla05g01002	1056	SMART	LRR_typ_2	609	633	IPR003591	-
Cla05g01002	1056	SMART	LRR_typ_2	401	424	IPR003591	-
Cla05g01002	1056	SMART	LRR_typ_2	113	136	IPR003591	-
Cla05g01002	1056	SUPERFAMILY	L domain-like	42	322	-	-
Cla05g01002	1056	PANTHER	PHYTOSULFOKINE RECEPTOR 2	40	165	-	-
Cla05g01002	1056	PANTHER	PHYTOSULFOKINE RECEPTOR 2	456	524	-	-
Cla05g01002	1056	Gene3D	Ribonuclease Inhibitor	43	160	IPR032675	-
Cla05g01002	1056	PRINTS	Leucine-rich repeat signature	609	622	-	-
Cla05g01002	1056	PRINTS	Leucine-rich repeat signature	502	515	-	-
Cla05g01002	1056	CDD	STKc_IRAK	786	1047	-	-
Cla05g01002	1056	Gene3D	Ribonuclease Inhibitor	161	400	IPR032675	-
Cla05g01002	1056	Gene3D	Transferase(Phosphotransferase) domain 1	856	1055	-	-
Cla05g01002	1056	PANTHER	PHYTOSULFOKINE RECEPTOR 2	621	1053	-	-
Cla05g01002	1056	ProSitePatterns	Protein kinases ATP-binding region signature.	786	808	IPR017441	GO:0005524
Cla05g01002	1056	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	282	446	-	-
Cla05g01002	1056	ProSiteProfiles	Leucine-rich repeat profile.	611	634	IPR001611	GO:0005515
Cla05g01002	1056	Pfam	Leucine rich repeat N-terminal domain	44	80	IPR013210	-
Cla05g01002	1056	SUPERFAMILY	L domain-like	555	671	-	-
Cla05g01002	1056	ProSiteProfiles	Leucine-rich repeat profile.	403	425	IPR001611	GO:0005515
Cla05g01002	1056	SUPERFAMILY	Protein kinase-like (PK-like)	761	1051	IPR011009	-
Cla05g01002	1056	Gene3D	Ribonuclease Inhibitor	416	530	IPR032675	-
Cla05g01002	1056	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	568	625	-	-
Cla05g01002	1056	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	902	914	IPR008271	GO:0004672\|GO:0006468
Cla05g01002	1056	Pfam	Leucine Rich Repeat	501	520	IPR001611	GO:0005515
Cla05g01002	1056	Gene3D	Ribonuclease Inhibitor	567	678	IPR032675	-
Cla05g01002	1056	Gene3D	Phosphorylase Kinase; domain 1	749	855	-	-
Cla05g01002	1056	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	40	165	-	-
Cla05g01002	1056	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	621	1053	-	-
Cla05g01002	1056	SUPERFAMILY	L domain-like	245	526	-	-
Cla05g01002	1056	Pfam	Protein kinase domain	781	1048	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cla05g01002	-	-	-	cmo:103496072	1930.22

Dupl-types

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cla05g01002	Cla-Chr5:10080430	Cla11g00084	Cla-Chr11:1098058	0	dispersed
	Cla05g01002	Cla-Chr5:10080430	Cla01g01963	Cla-Chr1:34272640	6.73E-136	transposed

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi16g946	.	Blo15g00038	.	.	.	Bpe07g01070	.	.	.	.	.	.	.	.	.	.	Cpe14g00011	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cone5ag0741	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cma16g00011	Cma18g01347	.	.	.	.	.	.	.	.	.	.	.	Cla05g01002	.	.	.	.	.	.	.	.	.	.
	Vvi19g193	.	.	.	.	Bpe09g00240	.	.	Bma13g00942	Cmo16g00436	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cone6ag0157	Cone9ag0181	Cone14ag1058	.	.	.	.	.	.	Blo10g00752	.	.	.	.	.	.	.	.	.	.	Cma16g00736	.	Car16g00368	Cpe14g00338	.	.	.	.	.	.	.	.	Cla05g01002	.	.	.	.	.	.	.	.	Chy06g01163	.

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cla11g00230	CCT	146	498	Trihelix Transcription Factor Family	AT1G12040	65.1	2.6e-44	177.6
Cla05g00515	.	38	363	Trihelix Transcription Factor Family	AT1G12040	58.8	7.4e-39	159.5
Cla06g01020	CCT	54	228	Trihelix Transcription Factor Family	AT1G12040	63.4	6.9e-37	152.9
Cla11g00230	CCT	128	503	Trihelix Transcription Factor Family	AT4G18670	80.4	6.3e-66	249.6
Cla06g01020	CCT	33	401	Trihelix Transcription Factor Family	AT4G18670	81.6	3.4e-64	243.8
Cla06g00331	.	26	219	Trihelix Transcription Factor Family	AT4G18670	58.5	1.1e-38	159.1
Cla05g00515	.	32	365	Trihelix Transcription Factor Family	AT4G18670	64.5	1.0e-36	152.5
Cla06g00331	.	9	414	Trihelix Transcription Factor Family	AT3G19020	62.0	7.1e-55	213.0
Cla06g01020	CCT	35	399	Trihelix Transcription Factor Family	AT3G19020	73.6	1.5e-41	168.7
Cla11g00230	CCT	123	320	Trihelix Transcription Factor Family	AT3G19020	69.5	1.1e-39	162.5
Cla05g01996	.	70	227	Trihelix Transcription Factor Family	AT3G19020	74.1	3.3e-36	151.0
Cla06g00331	.	62	395	Trihelix Transcription Factor Family	AT1G49490	66.1	2.3e-44	177.9
Cla06g01020	CCT	65	402	Trihelix Transcription Factor Family	AT1G49490	74.0	1.2e-40	165.6
Cla11g00230	CCT	157	489	Trihelix Transcription Factor Family	AT1G49490	73.3	1.5e-40	165.2
Cla06g00331	.	25	395	Trihelix Transcription Factor Family	AT2G15880	66.5	3.9e-61	233.4
Cla06g01020	CCT	35	406	Trihelix Transcription Factor Family	AT2G15880	67.3	1.6e-41	168.3
Cla11g00230	CCT	128	489	Trihelix Transcription Factor Family	AT2G15880	66.3	3.8e-40	163.7
Cla06g00331	.	1	400	Trihelix Transcription Factor Family	AT4G33970	63.2	1.9e-57	221.1
Cla06g01020	CCT	35	402	Trihelix Transcription Factor Family	AT4G33970	67.5	2.5e-36	151.0
Cla08g01699	.	1	196	Trihelix Transcription Factor Family	AT1G13450	63.3	4.4e-67	251.5
Cla10g02096	CCT	50	301	Trihelix Transcription Factor Family	AT5G01380	57.7	4.1e-50	195.7
Cla08g00363	.	64	551	Trihelix Transcription Factor Family	AT1G33240	50.5	2.7e-76	283.5
Cla11g00230	CCT	128	503	Trihelix Transcription Factor Family	AT4G18670	80.4	6.3e-66	249.6
Cla06g01020	CCT	33	401	Trihelix Transcription Factor Family	AT4G18670	81.6	3.4e-64	243.8
Cla06g00331	.	26	219	Trihelix Transcription Factor Family	AT4G18670	58.5	1.1e-38	159.1
Cla05g00515	.	32	365	Trihelix Transcription Factor Family	AT4G18670	64.5	1.0e-36	152.5
Cla06g00331	.	1	400	Trihelix Transcription Factor Family	AT4G33970	63.2	1.9e-57	221.1
Cla06g01020	CCT	35	402	Trihelix Transcription Factor Family	AT4G33970	67.5	2.5e-36	151.0
Cla08g00363	.	59	552	Trihelix Transcription Factor Family	AT1G76880	57.3	4.3e-114	409.1
Cla08g00365	.	51	475	Trihelix Transcription Factor Family	AT1G76880	55.6	1.2e-87	321.2
Cla10g01831	.	102	368	Trihelix Transcription Factor Family	AT3G10000	53.5	1.6e-63	240.7
Cla06g00331	.	9	414	Trihelix Transcription Factor Family	AT3G19020	62.0	7.1e-55	213.0
Cla06g01020	CCT	35	399	Trihelix Transcription Factor Family	AT3G19020	73.6	1.5e-41	168.7
Cla11g00230	CCT	123	320	Trihelix Transcription Factor Family	AT3G19020	69.5	1.1e-39	162.5
Cla05g01996	.	70	227	Trihelix Transcription Factor Family	AT3G19020	74.1	3.3e-36	151.0
Cla06g00331	.	62	395	Trihelix Transcription Factor Family	AT1G49490	66.1	2.3e-44	177.9
Cla06g01020	CCT	65	402	Trihelix Transcription Factor Family	AT1G49490	74.0	1.2e-40	165.6
Cla11g00230	CCT	157	489	Trihelix Transcription Factor Family	AT1G49490	73.3	1.5e-40	165.2
Cla05g02353	.	273	659	Trihelix Transcription Factor Family	AT1G68690	61.9	5.1e-132	468.8
Cla11g00502	.	314	740	Trihelix Transcription Factor Family	AT1G68690	55.8	2.2e-127	453.4
Cla05g02542	.	429	768	Trihelix Transcription Factor Family	AT1G68690	65.3	1.5e-123	440.7
Cla06g00852	.	251	545	Trihelix Transcription Factor Family	AT1G68690	64.4	4.5e-112	402.5
Cla11g00221	.	284	572	Trihelix Transcription Factor Family	AT1G68690	64.4	5.8e-112	402.1
Cla07g00865	.	312	620	Trihelix Transcription Factor Family	AT1G68690	57.1	7.9e-101	365.2
Cla07g01296	.	393	670	Trihelix Transcription Factor Family	AT1G68690	55.3	3.6e-85	313.2
Cla07g00141	.	359	639	Trihelix Transcription Factor Family	AT1G68690	57.0	6.1e-85	312.4
Cla10g01096	.	364	652	Trihelix Transcription Factor Family	AT1G68690	55.5	2.3e-84	310.5
Cla03g01496	.	778	1059	Trihelix Transcription Factor Family	AT1G68690	55.4	1.7e-82	304.3
Cla09g00062	.	491	772	Trihelix Transcription Factor Family	AT1G68690	54.4	5.0e-79	292.7
Cla10g01964	.	79	386	Trihelix Transcription Factor Family	AT1G68690	51.6	4.2e-78	289.7
Cla05g00626	.	74	358	Trihelix Transcription Factor Family	AT1G68690	51.4	3.6e-77	286.6
Cla11g01825	CCT,ECH	113	394	Trihelix Transcription Factor Family	AT1G68690	50.9	3.9e-76	283.1
Cla02g01354	.	85	376	Trihelix Transcription Factor Family	AT1G68690	50.5	1.5e-75	281.2
Cla05g02353	.	273	605	Trihelix Transcription Factor Family	AT1G26150	62.7	1.3e-111	401.0
Cla11g00502	.	279	660	Trihelix Transcription Factor Family	AT1G26150	55.6	6.3e-111	398.7
Cla05g02542	.	472	714	Trihelix Transcription Factor Family	AT1G26150	71.2	1.5e-99	360.9
Cla11g00221	.	284	518	Trihelix Transcription Factor Family	AT1G26150	68.9	3.0e-97	353.2
Cla06g00852	.	248	491	Trihelix Transcription Factor Family	AT1G26150	66.7	8.3e-95	345.1
Cla07g00865	.	312	566	Trihelix Transcription Factor Family	AT1G26150	60.9	3.6e-90	329.7
Cla03g01496	.	771	1008	Trihelix Transcription Factor Family	AT1G26150	60.1	5.4e-78	289.3
Cla10g01096	.	365	601	Trihelix Transcription Factor Family	AT1G26150	60.1	1.6e-74	277.7
Cla10g01964	.	70	326	Trihelix Transcription Factor Family	AT1G26150	54.9	1.6e-74	277.7
Cla07g01296	.	386	621	Trihelix Transcription Factor Family	AT1G26150	55.5	2.1e-74	277.3
Cla02g00525	.	126	370	Trihelix Transcription Factor Family	AT1G26150	53.2	4.4e-72	269.6
Cla09g00062	.	465	721	Trihelix Transcription Factor Family	AT1G26150	53.3	1.7e-71	267.7
Cla08g01583	.	581	810	Trihelix Transcription Factor Family	AT1G26150	53.5	6.4e-71	265.8
Cla11g00084	.	691	920	Trihelix Transcription Factor Family	AT1G26150	54.3	3.2e-70	263.5
Cla02g01803	.	175	404	Trihelix Transcription Factor Family	AT1G26150	55.6	9.2e-70	261.9
Cla05g00626	.	72	305	Trihelix Transcription Factor Family	AT1G26150	55.6	7.8e-69	258.8
Cla06g01298	CCT	18	256	Trihelix Transcription Factor Family	AT1G26150	51.0	7.8e-69	258.8
Cla02g01354	.	85	316	Trihelix Transcription Factor Family	AT1G26150	56.0	1.0e-68	258.5
Cla11g01825	CCT,ECH	113	342	Trihelix Transcription Factor Family	AT1G26150	55.2	2.3e-68	257.3
Cla09g02192	.	182	411	Trihelix Transcription Factor Family	AT1G26150	54.7	2.3e-68	257.3
Cla01g01655	.	174	403	Trihelix Transcription Factor Family	AT1G26150	50.9	3.9e-68	256.5
Cla09g02204	.	657	912	Trihelix Transcription Factor Family	AT1G26150	51.6	5.1e-68	256.1
Cla07g00254	.	74	309	Trihelix Transcription Factor Family	AT1G26150	52.5	1.1e-67	255.0
Cla08g00940	CCT,ECH	106	335	Trihelix Transcription Factor Family	AT1G26150	56.6	1.9e-67	254.2
Cla06g00395	.	167	395	Trihelix Transcription Factor Family	AT1G26150	54.3	4.3e-67	253.1
Cla07g01184	.	15	257	Trihelix Transcription Factor Family	AT1G26150	50.6	4.3e-67	253.1
Cla09g00842	.	110	343	Trihelix Transcription Factor Family	AT1G26150	52.6	2.1e-66	250.8
Cla06g01266	.	282	509	Trihelix Transcription Factor Family	AT1G26150	50.4	1.5e-64	244.6
Cla05g00149	.	186	404	Trihelix Transcription Factor Family	AT1G26150	50.9	3.4e-64	243.4
Cla04g00878	.	58	295	Trihelix Transcription Factor Family	AT1G26150	51.3	7.6e-64	242.3
Cla11g00478	.	282	521	Trihelix Transcription Factor Family	AT1G26150	50.2	9.9e-64	241.9
Cla10g01256	.	57	291	Trihelix Transcription Factor Family	AT1G26150	50.6	1.3e-63	241.5
Cla05g02357	.	295	523	Trihelix Transcription Factor Family	AT1G26150	50.2	1.3e-63	241.5
Cla05g00864	.	1018	1247	Trihelix Transcription Factor Family	AT1G26150	50.9	3.8e-63	240.0
Cla08g00308	.	292	524	Trihelix Transcription Factor Family	AT1G26150	50.6	1.9e-62	237.7
Cla09g01478	.	304	537	Trihelix Transcription Factor Family	AT1G26150	50.9	3.2e-62	236.9
Cla03g00479	CCT	340	571	Trihelix Transcription Factor Family	AT1G26150	51.3	5.4e-62	236.1
Cla05g02542	.	419	664	Trihelix Transcription Factor Family	AT1G23540	68.0	5.1e-90	328.9
Cla06g00852	.	246	441	Trihelix Transcription Factor Family	AT1G23540	69.4	3.9e-74	276.2
Cla11g00221	.	284	468	Trihelix Transcription Factor Family	AT1G23540	69.2	3.3e-73	273.1
Cla07g00865	.	309	517	Trihelix Transcription Factor Family	AT1G23540	64.6	3.7e-72	269.6
Cla05g02353	.	369	555	Trihelix Transcription Factor Family	AT1G23540	67.9	1.2e-70	264.6
Cla11g00502	.	398	610	Trihelix Transcription Factor Family	AT1G23540	61.0	2.9e-69	260.0
Cla09g02192	.	169	361	Trihelix Transcription Factor Family	AT1G23540	52.6	6.5e-53	205.7
Cla02g01803	.	147	354	Trihelix Transcription Factor Family	AT1G23540	50.7	1.9e-52	204.1
Cla02g00525	.	142	321	Trihelix Transcription Factor Family	AT1G23540	53.9	9.4e-52	201.8
Cla01g01655	.	163	353	Trihelix Transcription Factor Family	AT1G23540	51.6	2.1e-51	200.7
Cla08g01583	.	570	760	Trihelix Transcription Factor Family	AT1G23540	50.5	2.7e-51	200.3
Cla02g01451	.	155	345	Trihelix Transcription Factor Family	AT1G23540	51.6	3.6e-51	199.9
Cla03g01496	.	765	958	Trihelix Transcription Factor Family	AT1G23540	51.8	3.6e-51	199.9
Cla11g00478	.	294	470	Trihelix Transcription Factor Family	AT1G23540	57.5	7.9e-51	198.7
Cla10g02161	.	607	789	Trihelix Transcription Factor Family	AT1G23540	52.5	1.4e-50	198.0
Cla10g01257	.	609	805	Trihelix Transcription Factor Family	AT1G23540	50.3	2.3e-50	197.2
Cla06g01266	.	281	458	Trihelix Transcription Factor Family	AT1G23540	55.0	6.7e-50	195.7
Cla07g00141	.	359	538	Trihelix Transcription Factor Family	AT1G23540	53.9	1.1e-49	194.9
Cla05g02357	.	296	472	Trihelix Transcription Factor Family	AT1G23540	54.7	1.5e-49	194.5
Cla07g01296	.	385	571	Trihelix Transcription Factor Family	AT1G23540	50.8	1.5e-49	194.5
Cla11g00420	.	315	452	Trihelix Transcription Factor Family	AT1G23540	65.9	2.0e-49	194.1
Cla06g00395	.	154	345	Trihelix Transcription Factor Family	AT1G23540	51.0	2.0e-49	194.1
Cla11g01825	CCT,ECH	113	293	Trihelix Transcription Factor Family	AT1G23540	53.0	5.7e-49	192.6
Cla03g01510	.	376	561	Trihelix Transcription Factor Family	AT1G23540	50.5	5.7e-49	192.6
Cla01g00725	.	671	847	Trihelix Transcription Factor Family	AT1G23540	53.1	7.4e-49	192.2
Cla09g00062	.	490	671	Trihelix Transcription Factor Family	AT1G23540	52.2	1.3e-48	191.4
Cla09g02204	.	683	860	Trihelix Transcription Factor Family	AT1G23540	51.7	6.3e-48	189.1
Cla08g00308	.	292	472	Trihelix Transcription Factor Family	AT1G23540	53.6	1.8e-47	187.6
Cla01g02327	.	341	520	Trihelix Transcription Factor Family	AT1G23540	50.6	2.4e-47	187.2
Cla05g00864	.	1018	1193	Trihelix Transcription Factor Family	AT1G23540	51.7	5.3e-47	186.0
Cla06g01573	.	966	1144	Trihelix Transcription Factor Family	AT1G23540	50.3	5.3e-47	186.0
Cla10g00875	.	278	458	Trihelix Transcription Factor Family	AT1G23540	53.6	7.0e-47	185.7
Cla10g01096	.	364	551	Trihelix Transcription Factor Family	AT1G23540	52.7	9.1e-47	185.3
Cla09g01478	.	304	484	Trihelix Transcription Factor Family	AT1G23540	53.6	2.6e-46	183.7
Cla05g01002	.	772	947	Trihelix Transcription Factor Family	AT1G23540	52.8	3.4e-46	183.3
Cla09g00322	.	800	975	Trihelix Transcription Factor Family	AT1G23540	50.6	3.4e-46	183.3
Cla01g01557	.	876	1055	Trihelix Transcription Factor Family	AT1G23540	51.7	5.9e-46	182.6
Cla07g00984	.	526	703	Trihelix Transcription Factor Family	AT1G23540	51.1	3.8e-45	179.9
Cla08g01699	.	1	406	Trihelix Transcription Factor Family	AT3G25990	62.6	5.4e-139	491.1
Cla11g00230	CCT	146	498	Trihelix Transcription Factor Family	AT1G12040	65.1	2.6e-44	177.6
Cla05g00515	.	38	363	Trihelix Transcription Factor Family	AT1G12040	58.8	7.4e-39	159.5
Cla06g01020	CCT	54	228	Trihelix Transcription Factor Family	AT1G12040	63.4	6.9e-37	152.9
Cla10g02096	CCT	50	304	Trihelix Transcription Factor Family	AT2G38250	65.1	1.3e-55	213.8
Cla11g00502	.	301	819	Trihelix Transcription Factor Family	AT5G38560	60.0	4.4e-163	572.0
Cla05g02353	.	292	717	Trihelix Transcription Factor Family	AT5G38560	60.1	7.3e-142	501.5
Cla05g02542	.	463	838	Trihelix Transcription Factor Family	AT5G38560	63.5	9.2e-137	484.6
Cla11g00221	.	222	627	Trihelix Transcription Factor Family	AT5G38560	55.4	3.7e-122	436.0
Cla06g00852	.	235	611	Trihelix Transcription Factor Family	AT5G38560	58.0	6.0e-120	428.7
Cla07g00865	.	316	668	Trihelix Transcription Factor Family	AT5G38560	58.7	3.5e-112	402.9
Cla10g01096	.	368	683	Trihelix Transcription Factor Family	AT5G38560	52.2	2.8e-85	313.5
Cla07g01296	.	392	670	Trihelix Transcription Factor Family	AT5G38560	53.7	4.5e-83	306.2
Cla03g01496	.	778	1063	Trihelix Transcription Factor Family	AT5G38560	54.6	4.2e-81	299.7
Cla07g00141	.	359	653	Trihelix Transcription Factor Family	AT5G38560	52.0	1.8e-79	294.3
Cla09g00062	.	491	787	Trihelix Transcription Factor Family	AT5G38560	50.8	1.9e-78	290.8
Cla10g01964	.	95	384	Trihelix Transcription Factor Family	AT5G38560	50.3	1.3e-74	278.1
Cla09g02192	.	181	466	Trihelix Transcription Factor Family	AT5G38560	50.2	1.7e-74	277.7
Cla11g00221	.	291	652	Trihelix Transcription Factor Family	AT4G32710	64.1	8.7e-125	444.9
Cla06g00852	.	239	623	Trihelix Transcription Factor Family	AT4G32710	60.6	5.4e-119	425.6
Cla05g02542	.	436	840	Trihelix Transcription Factor Family	AT4G32710	54.0	1.1e-108	391.3
Cla07g00865	.	319	653	Trihelix Transcription Factor Family	AT4G32710	60.2	3.7e-107	386.3
Cla05g02353	.	375	664	Trihelix Transcription Factor Family	AT4G32710	62.5	3.3e-100	363.2
Cla03g01496	.	778	1064	Trihelix Transcription Factor Family	AT4G32710	51.0	4.7e-78	289.7
Cla11g01825	CCT,ECH	113	399	Trihelix Transcription Factor Family	AT4G32710	50.3	5.5e-71	266.2
Cla05g02542	.	419	828	Trihelix Transcription Factor Family	AT1G70460	70.3	6.8e-159	558.1
Cla11g00221	.	283	635	Trihelix Transcription Factor Family	AT1G70460	64.6	9.6e-129	458.0
Cla11g00502	.	316	786	Trihelix Transcription Factor Family	AT1G70460	52.5	1.4e-127	454.1
Cla05g02353	.	369	714	Trihelix Transcription Factor Family	AT1G70460	64.0	7.6e-126	448.4
Cla06g00852	.	245	594	Trihelix Transcription Factor Family	AT1G70460	64.6	1.3e-125	447.6
Cla07g00865	.	309	675	Trihelix Transcription Factor Family	AT1G70460	61.2	4.8e-120	429.1
Cla07g01296	.	385	670	Trihelix Transcription Factor Family	AT1G70460	51.4	1.2e-81	301.6
Cla03g01510	.	375	664	Trihelix Transcription Factor Family	AT1G70460	50.3	4.4e-81	299.7
Cla03g01496	.	773	1063	Trihelix Transcription Factor Family	AT1G70460	51.5	3.1e-79	293.5
Cla10g01096	.	364	656	Trihelix Transcription Factor Family	AT1G70460	53.0	7.0e-79	292.4
Cla02g01803	.	164	461	Trihelix Transcription Factor Family	AT1G70460	50.2	5.9e-78	289.3
Cla07g00141	.	359	643	Trihelix Transcription Factor Family	AT1G70460	52.1	8.5e-77	285.4
Cla09g00062	.	490	776	Trihelix Transcription Factor Family	AT1G70460	50.3	3.6e-75	280.0
Cla06g00395	.	156	432	Trihelix Transcription Factor Family	AT1G70460	50.5	3.7e-72	270.0
Cla06g00331	.	25	395	Trihelix Transcription Factor Family	AT2G15880	66.5	3.9e-61	233.4
Cla06g01020	CCT	35	406	Trihelix Transcription Factor Family	AT2G15880	67.3	1.6e-41	168.3
Cla11g00230	CCT	128	489	Trihelix Transcription Factor Family	AT2G15880	66.3	3.8e-40	163.7
Cla10g01831	.	102	368	Trihelix Transcription Factor Family	AT5G03680	59.5	4.2e-77	286.2

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0011381	0	1	1	1	1	0	1	0	0	1	1	0	1	1	0	1	0	0	1	0	1	0	0	0	0	1	0	0	0	1	14

Regulatory proteins

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	80560	PF00069	Pkinase	5.50E-44	CL0016	Cla	PK

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cla05g01002	Cla_Chr05	FPKM	33.108227	32.739864	43.898811	42.017323	33.831947	21.206303	30.566147	57.098541	59.441154	60.546295