Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01022 ATGAAGTCGATCAAATCCTCCGGCTTAAACATGGAGCAACCCATTCGTGGATCCTTTGATGAAGGCCAATACAGAAGCCGAAGCATTCACTCCGACGCCGCTAGAATCGATTTGGATAAGAAGGTGAAGAAGGTTCGAGGAAGAGGCAAAACGAAGAACTCGTGGAAACAAGATAGCGAGAAGAGTTTTAAAGAAAAACGCACAATTGAGAGTCTATTTGAGAAGGATTTTGTGGAGAGGCTTCGAAACAGAATCCAAATCCAGACAAGATTTCATTTCGAAGATACTGAAAAGTACTTACCCAGTGATGAATTGGGAACAATTATTCGAAGTGACCAAGCAAGGATGGCGGAGACAATATGGGAAGAAAGCGTAATTCGCCTGGCGCCGCTGTATAGAGCGGCGCTAATGGGCGAATGGGAGATAGCAGAAGCCATTTTCAAGCAAGATTCTAGAGCAATCACGTCGGAGATCAGCCTCTTGAACGAGACTGCTCTCCATGTAGCGGTCGGCACAGGCGGCAATTTGGGATTTGTTGAGAAGCTGGTGAGCTTAATGTGGAAACGATCACTGCCGCTTACACAGGAGGATTTATATGGGAATACTGCGCTTGCTGTTGCCGCCATTGTTGGAAATGTGAAAGCTGCAGAAATCTTGGTCGGGAAAGATGAGATGTTGCCGGCGATGAGAAACCGGGTGAATTACTCGCCGTTGCATCTGGCGGCGAAATATGGGCACAGAGATATGGTTTTGTATCTTCTAGGCGTAACAAAGGACGAAGGGATATTCACCGGTCAATCTGGTGCTAGGCTTCTCAATCTTCTCATTTCATTTGATATCTATGATGTAGCTCTTGATATATTAAATCAACAGCCGAAGTTGGCGGTGGAACAAGATCAATACGGATTCACAGCTCTACAAATGTTGGCTGAAAAACCAGATGTGTTTGAGAGTGGAACAACTCAGCTTGGGCGTTGCCGACGCATCCTTCATCCTCGCTCCCGTGTTGCTGTGGAAGTCTTCGATGCTTCTGATCATCTGCCCATGCAACAAAGTGATATCGAAAGTCCTCCTGAAATCTCAAACAATGCAGCTGCAAGAATGGGGAGTGTTGAAGTTGCCATAGCAATTGTAAGAGTTTATCCTTATTCAATTTGGTTCCGCGATAGCCGTGAATGCAATATTTTTCAGATCGCTGTTCTTCATCGTCAACACAAGATTTATAATCTTATATATCAAATGACTTCACACAAGTATTTTGCAGCAGCTTTTCTTGACAATAATGATAACAACATCTTGCATTTAGCTGGTGAGCTTGTTCCATCTCATTCAATCTCTGGTGCAGCTTTGCAATTGCAACGAGAATTGCAGTGGTTTAAGGAAGTTGAAAGATTAGTGCTACCATCTTACAAAAGCATGACAAACAAAGATAACAAAACACCAAGAATGGTATTTAGTGAAGAACATGAAGAGCTAGTTCAGCAAGGTGAAAAATGGATGAAGAACACTGCTTCATCGTACACCGTTGTTGCGGCGCTCATTGCGACGGTTGCATTTGCAGCAATTTTCACTGTACCTGGTGGCAACGACAATGATCAAGGCATCCCTATTCTCATTAACCACAAATTCTTCATGGTTTTTGTAGCAGCAGATGCATTAGCATTAATCACTTCATCTGCTTCAGTAATAATGTTTTTAGGAATACTCACTTCGCGCTACGCAGAAGACGATTTTCTCAAGGTGTTACCTTCGAGATTGATTATCGGTCTCGTCTCGTTGTTCATCTCTATATTATCCATGGTAGCAGCCTTCAGTGCATCCCTTTGCCTAGTTCTTGTTCATCAACTGAGATGGGTGTGGGCTCCAATGATAGTATTTGCCTTGGTTCCTGTTATCTTATTTGCCATGTTGCAATTTCCACTTTTGGTGCAAATGACATCTTCCACATATGGGCCTAGCATTTTTGGTTTGCAAATTTTTCCTTCACAATCCATTCGATTTTGCTCCGTAAGTCTTTATGCGTGTTTCATCGATTTACGCGTTGTGGTTTTAGATCCGTGTTCTGTGATCGACGTTGAGAGAGAGAATGGCTTCTCGTTTCTGGACCCAGGTATTGCGTTCAGTCTAAACGGTGGTGGCAGTGGTTCTGATTCTGAAGCGGAGGAGAGTGACTATGGTGAAGAGCTTGACGACGTACAGGTTGATCCTGGCTCCCAACCGAACAGAAGCAGATATCTGCAAGGGAATGCCAGTGACAGCGAAGATTCTGAGGATAAGAAGCGTACTGTCAGGTCGGCTAAAGATAAGCGTTTTGAGGAGATGTCTGCTACAGTGGATCAGATGAAAAATGCAATGAAGATCAATGACTGGGTTAGCCTGCAGGAGAGTTTTGATAAAATAAATAAGCAGCTTGAGAAAGTCATGCGTGTTACTGAGTCTGAGAAGGTGCCGACTCTTTATATTAAAGCACTTGTGATGCTAGAGGACTTCCTAAATGAAGCCATGGCCAATAAGGAAGCAAAGAAGAAAATGAGTACTAGCAATTCTAAGGCCTTAAATTCAATGAAACAGAAGCTAAAGAAGAACAACAAGCAATATGAAGAGGTAATTGCCAAGTATAGGGAGAATCCTGAGATTGAGGAAGAAAAGGCTGATGAGCTGGAGGAGGAGGAGGAGGATGACGATGAATCTGAATATGAGGATGATCCTTCTAAAATCATGTCAGATTCAGAGCCAGAGCCAGATGTAGATGAAGAAGAAGATCTAGATGATCCAAGTCAAAACTGGGAGAAGAAGAAGAGCAAAAAAAATAAGCTCATGGATAAGCAGTTTATGAAGGATCCTAGTGAGATCACATGGGACACTGTGAACAAGAAATTTAAGGAGGTTGTGGCTGCTCGGGGTAGGAAGGGAACTGGAAGATTTGAGCAGGTTGAACAGCTTACATTCTTAACAAAAGTTGCTAAGACCCCTGCACAAAAGCTTGAGATTTTGTTCAGTGTTGTATCTGCTCAATTTGATGTTAATCCAGGTCTCAGTGGGCATATGCCTATCAGTGTGTGGAAGAAGTGTGTGCAGAACATGCTTTCTATAATTGACATTCTTGTGCAGAATTCCAACATTGTGGTGGATGATATGGTTGAACCTGATGAGAATGAAAGCCAGAAGCCAGCAGACTATAAGGGAACAATACGTGTTTGGGGAAACTTGGTTGCTTTTGTTGAGAGGATTGACACTGAGTTTTTTAAGAGTTTGCAGTGTATTGACCCACATACACGTGAGTATGTTGAAAGACTCAGAGATGAGCCAATGTTTATGGTTCTTGCTCAGAATGTCCAAGCATATTTGGAACGAGTTGGGGATTACAAAGCAGCTTCAAAAGTTGCCCTGAGGCGTGTTGAACTGATCTATTACAAACCACAAGAGGTTTATGATGCCATGAGAAAGCTTGCAGAGCTGTCAGAAGATGGAGATAGTGGAGATGCAAGTGAGGAGGCTAAAGTGGTTGAAGAGAGCAGGGGCCCTGCTGCATTTATTGTCACTCCAGAGCTTGTACCTCGTAAACCCACCTTTCCAGAGAGTAGTAGGGCTTTTATGGACATTCTGGTAACCCTTATCTACCAATATGGAGATGAGCGCACTAAAGCACGAGCTATGCTCTGCGATATTTATCACCACGCTCTCTTGGATGAATTTTATATTTCTCGTGACTTGTTACTGATGAGTCACTTACAGGATAGTATTCAACATTTGGATATTTCAACGCAGATCCTTTTCAATAGGGCAATGGCTCAACTTGGTTTATGTGGCTTTCGGGTTGGCCTGATTAGTGAAGGACATGGCTGTCTTTCAGAATTATATTCTGGTGGAAGGGTGAAGGAATTGCTCGCTCAAGGTGTCTCACAAAGCCGATACCATGAAAAGACTCCAGAACAGGAAAGGCTTGAAAGAAGAAGGCAGATGCCATACCACATGCACATAAATCTTGAGCTCCTGGAGGCTGTGCATTTAATATGTGCTATGCTGCTGGAAGTACCCAACATGGCAGGCAATGTTCATGATGCCAAGCGCAAGGTTATTAGTAAGAACTTTAGACGGTTACTTGAGGTGAGTGAGAGACAAACGTTTACGGGTCCTCCTGAGAATGTCAGAGATCATGTAATGGCTGCTACTCGGGCCCTTCGCAAGGGTGATTTCCAGAAGGCTTTTGATGTCATTGCATCTCTAGATGTATGGAAGCTACTTAGGAATCGTGATGAAGTGCTGGAAATGGTAAAAGGGAAAATCAAGGAGGAGGCTTTGAGGACTTACCTTCTCACATACTCTTCGTCCTACGATTCTCTGAGTTCGGACCAACTCACCCAAATGTTCGACCTTGCAGAGGGTCAAACACACAGGATTGTGAGCAAGATGATGATCAATGAGGAGCTCCATGCAAGTTGGGATCAGCCAAGCGGGTGTGTCATCTTCCACGATGTTACACACACCCGATTACAAGGCCTGGCATTCCAACTGGCTGATAAGTTGTCAATCCTTGCTGAAAGTAACGAGAGAGCAGTTGAGGCAAGAATAGGAGGATTAGATTTACCAATGAGGCGAAGAGACAACCAAGAATATGCTGCTGGAGGGGCTGTAGGAGGGAGTAGCAGGTGGCCAGATAACATGTCGTATAATCAAGGAAGGCATGGTGGTCCTAGTTCGCGTGCAGGATATAGCAGCGGTGGGCGAGGCCAAGGTGGGGCTGGTGGATATTCTAGAGACCGAATGGGTCAGTCTCGAGGAGGCAATGCAGGATATCAAAGCACTCGTTATCAAGACGCCGCATATGGATCAGGGAGGACTGCTTATCAGTCGGGTTCTGCCCGAGGATCCCAGATGGATGCTTCAGCTCGCATGGTCAGTCTCAACAAAGGTGTTCATGCTTAG 4926 44.19 MKSIKSSGLNMEQPIRGSFDEGQYRSRSIHSDAARIDLDKKVKKVRGRGKTKNSWKQDSEKSFKEKRTIESLFEKDFVERLRNRIQIQTRFHFEDTEKYLPSDELGTIIRSDQARMAETIWEESVIRLAPLYRAALMGEWEIAEAIFKQDSRAITSEISLLNETALHVAVGTGGNLGFVEKLVSLMWKRSLPLTQEDLYGNTALAVAAIVGNVKAAEILVGKDEMLPAMRNRVNYSPLHLAAKYGHRDMVLYLLGVTKDEGIFTGQSGARLLNLLISFDIYDVALDILNQQPKLAVEQDQYGFTALQMLAEKPDVFESGTTQLGRCRRILHPRSRVAVEVFDASDHLPMQQSDIESPPEISNNAAARMGSVEVAIAIVRVYPYSIWFRDSRECNIFQIAVLHRQHKIYNLIYQMTSHKYFAAAFLDNNDNNILHLAGELVPSHSISGAALQLQRELQWFKEVERLVLPSYKSMTNKDNKTPRMVFSEEHEELVQQGEKWMKNTASSYTVVAALIATVAFAAIFTVPGGNDNDQGIPILINHKFFMVFVAADALALITSSASVIMFLGILTSRYAEDDFLKVLPSRLIIGLVSLFISILSMVAAFSASLCLVLVHQLRWVWAPMIVFALVPVILFAMLQFPLLVQMTSSTYGPSIFGLQIFPSQSIRFCSVSLYACFIDLRVVVLDPCSVIDVERENGFSFLDPGIAFSLNGGGSGSDSEAEESDYGEELDDVQVDPGSQPNRSRYLQGNASDSEDSEDKKRTVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLNEAMANKEAKKKMSTSNSKALNSMKQKLKKNNKQYEEVIAKYRENPEIEEEKADELEEEEEDDDESEYEDDPSKIMSDSEPEPDVDEEEDLDDPSQNWEKKKSKKNKLMDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPISVWKKCVQNMLSIIDILVQNSNIVVDDMVEPDENESQKPADYKGTIRVWGNLVAFVERIDTEFFKSLQCIDPHTREYVERLRDEPMFMVLAQNVQAYLERVGDYKAASKVALRRVELIYYKPQEVYDAMRKLAELSEDGDSGDASEEAKVVEESRGPAAFIVTPELVPRKPTFPESSRAFMDILVTLIYQYGDERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLISEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAGNVHDAKRKVISKNFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAFDVIASLDVWKLLRNRDEVLEMVKGKIKEEALRTYLLTYSSSYDSLSSDQLTQMFDLAEGQTHRIVSKMMINEELHASWDQPSGCVIFHDVTHTRLQGLAFQLADKLSILAESNERAVEARIGGLDLPMRRRDNQEYAAGGAVGGSSRWPDNMSYNQGRHGGPSSRAGYSSGGRGQGGAGGYSRDRMGQSRGGNAGYQSTRYQDAAYGSGRTAYQSGSARGSQMDASARMVSLNKGVHA 1641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10412339 10434360 - ClCG05G009470.2 Cla05g01022 272512

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01022 1641 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 750 1355 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Cla05g01022 1641 Pfam Domain of unknown function 497 611 IPR026961 -
Cla05g01022 1641 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 717 1640 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Cla05g01022 1641 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 706 1570 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Cla05g01022 1641 MobiDBLite consensus disorder prediction 1 26 - -
Cla05g01022 1641 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 1424 1512 - -
Cla05g01022 1641 ProSiteProfiles Ankyrin repeat profile. 233 254 IPR002110 GO:0005515
Cla05g01022 1641 MobiDBLite consensus disorder prediction 1551 1566 - -
Cla05g01022 1641 ProSiteProfiles PCI domain profile. 1323 1495 IPR000717 -
Cla05g01022 1641 SUPERFAMILY Ankyrin repeat 130 436 IPR036770 -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 1541 1641 - -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 1594 1631 - -
Cla05g01022 1641 SUPERFAMILY Winged helix DNA-binding domain 1419 1494 IPR036390 -
Cla05g01022 1641 Pfam PCI domain 1363 1491 IPR000717 -
Cla05g01022 1641 Coils Coil 849 890 - -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 736 750 - -
Cla05g01022 1641 ProSiteProfiles Ankyrin repeat region circular profile. 233 254 - -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 841 937 - -
Cla05g01022 1641 SMART ANK_2a 161 191 IPR002110 GO:0005515
Cla05g01022 1641 SMART ANK_2a 233 262 IPR002110 GO:0005515
Cla05g01022 1641 SMART ANK_2a 199 228 IPR002110 GO:0005515
Cla05g01022 1641 MobiDBLite consensus disorder prediction 711 770 - -
Cla05g01022 1641 SMART PINT_4 1424 1512 IPR000717 -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 751 770 - -
Cla05g01022 1641 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 717 1640 - -
Cla05g01022 1641 Pfam Ankyrin repeats (3 copies) 166 254 IPR002110 GO:0005515
Cla05g01022 1641 Gene3D - 111 440 IPR036770 -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 860 880 - -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 881 902 - -
Cla05g01022 1641 MobiDBLite consensus disorder prediction 40 60 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01022 K03252 EIF3C; translation initiation factor 3 subunit C - csv:101203990 1643.25
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00428 Cla-Chr3:4894069 Cla05g01022 Cla-Chr5:10412339 6.12E-13 dispersed
Cla05g01022 Cla-Chr5:10412339 Cla03g00409 Cla-Chr3:4714611 1.89E-61 dispersed
Cla05g01022 Cla-Chr5:10412339 Cla05g01023 Cla-Chr5:10445349 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 2.3e-253 871.3
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT5G60390 95.5 2.3e-253 871.3
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 9.1e-242 832.8
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 2.3e-253 871.3
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT1G07920 95.5 2.3e-253 871.3
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 9.1e-242 832.8
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.3 2.9e-201 698.0
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 2.4e-200 694.9
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT1G07930 79.1 7.9e-191 663.3
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 2.3e-253 871.3
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT1G07940 95.5 2.3e-253 871.3
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 9.1e-242 832.8
Cla02g00178 . 229 340 Eukaryotic Initiation Factors Gene Family AT4G27130 89.3 6.2e-54 206.8
Cla10g00503 . 42 153 Eukaryotic Initiation Factors Gene Family AT4G27130 80.5 5.6e-47 183.7
Cla09g01010 . 1 112 Eukaryotic Initiation Factors Gene Family AT4G27130 79.6 2.8e-46 181.4
Cla02g00178 . 229 340 Eukaryotic Initiation Factors Gene Family AT5G54760 88.4 1.4e-53 205.7
Cla10g00503 . 42 153 Eukaryotic Initiation Factors Gene Family AT5G54760 80.5 5.6e-47 183.7
Cla09g01010 . 1 112 Eukaryotic Initiation Factors Gene Family AT5G54760 79.6 2.8e-46 181.4
Cla10g00503 . 42 153 Eukaryotic Initiation Factors Gene Family AT5G54940 86.6 5.2e-53 203.8
Cla09g01010 . 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 85.7 4.4e-52 200.7
Cla02g00178 . 232 340 Eukaryotic Initiation Factors Gene Family AT5G54940 75.2 2.4e-42 168.3
Cla02g00178 . 33 143 Eukaryotic Initiation Factors Gene Family AT1G54290 88.3 1.8e-53 205.3
Cla10g00503 . 42 153 Eukaryotic Initiation Factors Gene Family AT1G54290 80.5 6.6e-48 186.8
Cla09g01010 . 1 112 Eukaryotic Initiation Factors Gene Family AT1G54290 77.9 6.2e-46 180.3
Cla07g01490 . 7 134 Eukaryotic Initiation Factors Gene Family AT5G35680 92.2 6.0e-65 243.8
Cla02g00238 . 19 141 Eukaryotic Initiation Factors Gene Family AT5G35680 91.1 5.3e-61 230.7
Cla07g01490 . 7 151 Eukaryotic Initiation Factors Gene Family AT2G04520 88.3 1.0e-69 259.6
Cla02g00238 . 19 162 Eukaryotic Initiation Factors Gene Family AT2G04520 89.6 3.4e-65 244.6
Cla09g01444 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.9 1.4e-116 416.0
Cla09g01444 . 1 347 Eukaryotic Initiation Factors Gene Family AT5G05470 80.5 2.6e-156 548.5
Cla03g00004 . 76 377 Eukaryotic Initiation Factors Gene Family AT5G20920 67.8 2.8e-105 378.6
Cla03g00004 . 190 319 Eukaryotic Initiation Factors Gene Family AT5G01940 57.3 1.1e-36 150.6
Cla03g00004 . 194 371 Eukaryotic Initiation Factors Gene Family AT3G07920 57.7 9.3e-51 196.8
Cla11g00076 . 21 527 Eukaryotic Initiation Factors Gene Family AT1G04170 83.9 8.0e-241 829.7
Cla11g00076 . 24 527 Eukaryotic Initiation Factors Gene Family AT4G18330 76.0 1.1e-213 739.6
Cla11g00076 . 113 526 Eukaryotic Initiation Factors Gene Family AT2G18720 67.9 4.5e-157 551.2
Cla09g00127 . 1 394 Eukaryotic Initiation Factors Gene Family AT1G53880 79.2 3.0e-169 591.7
Cla09g00127 . 1 326 Eukaryotic Initiation Factors Gene Family AT1G72340 77.4 1.5e-134 476.1
Cla03g01437 . 60 383 Eukaryotic Initiation Factors Gene Family AT2G05830 74.4 6.6e-133 470.7
Cla01g00754 . 101 509 Eukaryotic Initiation Factors Gene Family AT3G07300 80.5 1.1e-177 619.8
Cla06g01492 . 1 651 Eukaryotic Initiation Factors Gene Family AT5G38640 61.1 3.6e-199 691.8
Cla06g01493 . 1 620 Eukaryotic Initiation Factors Gene Family AT5G38640 58.9 2.7e-183 639.0
Cla06g01492 . 328 651 Eukaryotic Initiation Factors Gene Family AT2G44070 75.7 1.0e-141 500.0
Cla06g01493 . 316 620 Eukaryotic Initiation Factors Gene Family AT2G44070 73.9 6.5e-128 454.1
Cla06g01493 . 1 571 Eukaryotic Initiation Factors Gene Family AT1G48970 56.6 7.9e-167 584.3
Cla06g01492 . 1 583 Eukaryotic Initiation Factors Gene Family AT1G48970 57.2 3.9e-166 582.0
Cla07g01573 . 1 899 Eukaryotic Initiation Factors Gene Family AT2G34970 52.0 7.1e-212 734.2
Cla04g01223 . 165 1143 Eukaryotic Initiation Factors Gene Family AT1G48410 79.5 0.0e+00 1531.5
Cla05g00502 . 119 1023 Eukaryotic Initiation Factors Gene Family AT1G48410 72.1 0.0e+00 1305.8
Cla01g01387 . 111 986 Eukaryotic Initiation Factors Gene Family AT1G48410 58.8 1.2e-300 1029.6
Cla05g00502 . 1 1023 Eukaryotic Initiation Factors Gene Family AT5G43810 77.8 0.0e+00 1590.9
Cla04g01223 . 229 1143 Eukaryotic Initiation Factors Gene Family AT5G43810 72.5 0.0e+00 1342.4
Cla01g01387 . 97 986 Eukaryotic Initiation Factors Gene Family AT5G43810 55.7 9.4e-292 1000.0
Cla03g01682 . 1 919 Eukaryotic Initiation Factors Gene Family AT4G11420 74.0 0.0e+00 1134.8
Cla03g00578 . 1 987 Eukaryotic Initiation Factors Gene Family AT4G11420 67.5 0.0e+00 1104.0
Cla03g00576 . 1 846 Eukaryotic Initiation Factors Gene Family AT4G11420 70.1 5.5e-300 1027.3
Cla09g00980 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G27640 76.7 0.0e+00 1135.2
Cla09g00984 . 127 962 Eukaryotic Initiation Factors Gene Family AT5G27640 64.4 0.0e+00 1076.2
Cla09g00980 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 74.8 0.0e+00 1109.7
Cla09g00984 . 131 962 Eukaryotic Initiation Factors Gene Family AT5G25780 63.3 4.7e-309 1057.0
Cla05g01022 . 715 1639 Eukaryotic Initiation Factors Gene Family AT3G56150 69.6 0.0e+00 1152.5
Cla05g01022 . 714 1544 Eukaryotic Initiation Factors Gene Family AT3G22860 59.3 4.4e-255 877.9
Cla01g02474 . 43 573 Eukaryotic Initiation Factors Gene Family AT4G20980 81.0 1.9e-255 878.6
Cla01g02474 . 43 573 Eukaryotic Initiation Factors Gene Family AT5G44320 79.1 1.4e-247 852.4
Cla04g00389 . 3 448 Eukaryotic Initiation Factors Gene Family AT3G57290 85.0 1.3e-224 775.8
Cla11g00604 . 2 285 Eukaryotic Initiation Factors Gene Family AT2G39990 76.6 4.4e-128 454.5
Cla05g01264 . 8 303 Eukaryotic Initiation Factors Gene Family AT3G11400 70.1 7.0e-119 424.1
Cla04g01230 . 8 288 Eukaryotic Initiation Factors Gene Family AT3G11400 69.6 3.8e-117 418.3
Cla04g01230 . 9 286 Eukaryotic Initiation Factors Gene Family AT5G06000 68.6 4.5e-107 384.8
Cla05g01264 . 9 303 Eukaryotic Initiation Factors Gene Family AT5G06000 64.8 1.0e-103 373.6
Cla07g01499 . 88 337 Eukaryotic Initiation Factors Gene Family AT1G10840 82.8 8.4e-120 426.8
Cla10g01469 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 66.7 2.6e-92 335.5
Cla10g01469 . 1 326 Eukaryotic Initiation Factors Gene Family AT2G46290 81.1 3.4e-159 558.1
Cla03g01417 . 1 165 Eukaryotic Initiation Factors Gene Family AT4G33250 81.2 3.8e-71 265.0
Cla07g01320 . 269 659 Eukaryotic Initiation Factors Gene Family AT3G13920 92.6 4.7e-208 720.7
Cla09g00073 . 1096 1477 Eukaryotic Initiation Factors Gene Family AT3G13920 93.7 4.9e-205 710.7
Cla10g01132 . 38 388 Eukaryotic Initiation Factors Gene Family AT3G13920 68.1 1.4e-135 479.9
Cla07g01320 . 269 681 Eukaryotic Initiation Factors Gene Family AT1G72730 89.4 2.3e-215 745.0
Cla09g00073 . 1096 1499 Eukaryotic Initiation Factors Gene Family AT1G72730 89.9 9.0e-212 733.0
Cla10g01132 . 38 410 Eukaryotic Initiation Factors Gene Family AT1G72730 65.4 1.9e-140 496.1
Cla10g01132 . 22 410 Eukaryotic Initiation Factors Gene Family AT3G19760 89.5 8.3e-202 699.9
Cla09g00073 . 1123 1499 Eukaryotic Initiation Factors Gene Family AT3G19760 64.2 1.2e-139 493.4
Cla07g01320 . 305 681 Eukaryotic Initiation Factors Gene Family AT3G19760 63.7 1.3e-138 490.0
Cla08g01330 . 1 436 Eukaryotic Initiation Factors Gene Family AT5G11200 81.8 1.9e-213 738.8
Cla08g01330 . 92 436 Eukaryotic Initiation Factors Gene Family AT5G11170 93.9 5.4e-186 647.1
Cla08g01723 . 1 526 Eukaryotic Initiation Factors Gene Family AT1G13020 52.0 2.8e-112 402.9
Cla02g01138 CCT 2 394 Eukaryotic Initiation Factors Gene Family AT4G38710 56.7 1.0e-78 291.2
Cla03g00677 . 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 68.1 1.8e-92 335.9
Cla03g00677 . 48 235 Eukaryotic Initiation Factors Gene Family AT1G29590 63.8 1.8e-74 276.2
Cla03g00677 . 48 235 Eukaryotic Initiation Factors Gene Family AT1G29550 63.3 6.7e-74 274.2
Cla06g00693 . 14 259 Eukaryotic Initiation Factors Gene Family AT5G35620 50.4 1.3e-62 236.5
Cla03g00677 . 58 224 Eukaryotic Initiation Factors Gene Family AT5G35620 55.8 1.7e-51 199.5
Cla10g01281 . 110 339 Eukaryotic Initiation Factors Gene Family AT5G18110 66.5 1.1e-83 306.6
Cla05g00309 . 503 1428 Eukaryotic Initiation Factors Gene Family AT3G60240 50.1 3.7e-227 786.2
Cla06g01250 . 1 810 Eukaryotic Initiation Factors Gene Family AT5G57870 62.3 1.7e-267 919.1
Cla05g01671 . 2 775 Eukaryotic Initiation Factors Gene Family AT5G57870 57.9 3.2e-242 835.1
Cla06g01250 . 2 810 Eukaryotic Initiation Factors Gene Family AT2G24050 54.8 2.3e-226 782.3
Cla05g01671 . 2 776 Eukaryotic Initiation Factors Gene Family AT2G24050 56.1 3.9e-221 765.0
Cla06g01250 . 252 442 Eukaryotic Initiation Factors Gene Family AT1G62410 52.4 5.8e-48 188.0
Cla05g01671 . 530 776 Eukaryotic Initiation Factors Gene Family AT4G30680 50.2 3.1e-56 215.7
Cla08g01089 . 38 478 Eukaryotic Initiation Factors Gene Family AT1G77840 62.8 1.1e-135 480.3
Cla08g01089 . 38 478 Eukaryotic Initiation Factors Gene Family AT1G36730 68.2 1.0e-120 430.6
Cla05g01681 CCT 1 132 Eukaryotic Initiation Factors Gene Family AT1G26630 81.1 7.8e-59 223.4
Cla05g02413 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 2.5e-57 218.4
Cla06g01235 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 4.3e-57 217.6
Cla08g01366 CCT 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.1 4.7e-56 214.2
Cla08g01366 CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.8 1.2e-76 282.7
Cla05g02413 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 83.6 4.7e-76 280.8
Cla06g01235 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 3.0e-75 278.1
Cla05g01681 CCT 1 188 Eukaryotic Initiation Factors Gene Family AT1G69410 73.4 1.4e-72 269.2
Cla06g01235 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 2.8e-76 281.6
Cla08g01366 CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 89.3 2.8e-76 281.6
Cla05g02413 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 86.2 1.0e-75 279.6
Cla05g01681 CCT 1 188 Eukaryotic Initiation Factors Gene Family AT1G13950 77.1 4.4e-74 274.2
Cla09g00902 . 338 1446 Eukaryotic Initiation Factors Gene Family AT1G76810 62.7 0.0e+00 1096.6
Cla09g00902 . 470 1432 Eukaryotic Initiation Factors Gene Family AT1G21160 55.0 3.9e-254 875.2
Cla02g00027 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.8 6.5e-125 443.7
Cla06g01193 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.3 5.5e-124 440.7
Cla02g00027 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 68.4 9.2e-95 343.6
Cla06g01193 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 67.6 7.8e-94 340.5
Cla02g00613 . 5 675 Eukaryotic Initiation Factors Gene Family AT2G23350 55.9 7.7e-197 684.1
Cla08g00733 . 36 635 Eukaryotic Initiation Factors Gene Family AT2G23350 50.3 1.1e-150 530.8
Cla02g00613 . 1 672 Eukaryotic Initiation Factors Gene Family AT4G34110 67.2 7.2e-245 843.6
Cla05g01087 . 83 902 Eukaryotic Initiation Factors Gene Family AT4G34110 55.8 1.7e-230 795.8
Cla08g00733 . 21 653 Eukaryotic Initiation Factors Gene Family AT4G34110 55.0 4.8e-172 601.7
Cla08g00733 . 1 635 Eukaryotic Initiation Factors Gene Family AT1G22760 58.2 4.6e-194 674.9
Cla02g00613 . 22 661 Eukaryotic Initiation Factors Gene Family AT1G22760 51.4 4.4e-160 562.0
Cla08g00733 . 34 653 Eukaryotic Initiation Factors Gene Family AT1G71770 57.8 1.9e-190 662.9
Cla02g00613 . 22 653 Eukaryotic Initiation Factors Gene Family AT1G71770 52.2 4.8e-162 568.5
Cla02g00613 . 25 675 Eukaryotic Initiation Factors Gene Family AT1G49760 69.2 5.3e-246 847.4
Cla05g01087 . 68 906 Eukaryotic Initiation Factors Gene Family AT1G49760 55.2 9.4e-235 810.1
Cla08g00733 . 34 652 Eukaryotic Initiation Factors Gene Family AT1G49760 52.6 1.1e-163 573.9
Cla05g01087 . 292 606 Eukaryotic Initiation Factors Gene Family AT1G34140 55.5 1.4e-92 337.0
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 2.3e-253 871.3
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT1G07920 95.5 2.3e-253 871.3
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 9.1e-242 832.8
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.3 2.9e-201 698.0
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 2.4e-200 694.9
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT1G07930 79.1 7.9e-191 663.3
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 2.3e-253 871.3
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT1G07940 95.5 2.3e-253 871.3
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 9.1e-242 832.8
Cla06g00765 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 2.3e-253 871.3
Cla09g01994 . 449 897 Eukaryotic Initiation Factors Gene Family AT5G60390 95.5 2.3e-253 871.3
Cla02g02044 . 767 1196 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 9.1e-242 832.8
Cla03g00350 . 1247 1471 Eukaryotic Initiation Factors Gene Family AT5G12110 54.8 2.6e-51 199.1
Cla11g00534 . 643 864 Eukaryotic Initiation Factors Gene Family AT5G12110 53.3 3.9e-47 185.3
Cla03g00350 . 1247 1471 Eukaryotic Initiation Factors Gene Family AT5G19510 63.1 2.9e-55 212.2
Cla11g00534 . 643 864 Eukaryotic Initiation Factors Gene Family AT5G19510 61.8 6.9e-49 191.0
Cla11g00534 . 646 866 Eukaryotic Initiation Factors Gene Family AT1G30230 78.4 1.3e-70 263.5
Cla03g00350 . 1253 1471 Eukaryotic Initiation Factors Gene Family AT1G30230 75.2 5.9e-68 254.6
Cla11g00534 . 646 864 Eukaryotic Initiation Factors Gene Family AT2G18110 79.5 2.3e-71 265.8
Cla03g00350 . 1250 1471 Eukaryotic Initiation Factors Gene Family AT2G18110 76.0 1.1e-70 263.5
Cla11g00054 . 61 476 Eukaryotic Initiation Factors Gene Family AT1G57720 75.0 9.4e-169 590.1
Cla10g00677 . 1 412 Eukaryotic Initiation Factors Gene Family AT1G57720 77.7 2.7e-168 588.6
Cla02g01791 . 257 1098 Eukaryotic Initiation Factors Gene Family AT1G56070 93.9 0.0e+00 1603.2
Cla02g01793 . 482 1323 Eukaryotic Initiation Factors Gene Family AT1G56070 93.9 0.0e+00 1603.2
Cla02g01810 . 572 1414 Eukaryotic Initiation Factors Gene Family AT1G56070 93.1 0.0e+00 1592.0
Cla09g00996 . 56 1092 Eukaryotic Initiation Factors Gene Family AT3G22980 71.8 0.0e+00 1459.1
Cla06g00149 . 421 850 Eukaryotic Initiation Factors Gene Family AT5G47880 88.6 3.9e-221 764.2
Cla06g00149 . 424 852 Eukaryotic Initiation Factors Gene Family AT1G12920 89.5 8.8e-226 779.6
Cla06g00149 . 421 852 Eukaryotic Initiation Factors Gene Family AT3G26618 91.0 1.5e-228 788.9
Cla05g01791 . 54 802 Eukaryotic Initiation Factors Gene Family AT5G10630 53.0 7.2e-203 704.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007091 1 2 0 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla05g01022 Cla_Chr05 FPKM 5.848289 7.774288 5.96032 6.515448 5.196051 5.435476 5.706211 7.860219 6.715797 7.683651