Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01076 ATGAGCATTACCGCGAATCAAAGAGGGTCCCGATCATGGACCACCGCCGAGGAGTTGCCGGTGTCCAGTGGGGCTCCGCTACCGCCCAAGAAAAAATGGTCAAATGCGATGCCTCTGTTCATCGCTCTCGTCGTCGTAGCAGAGATTATCTTTCTGGGTCGCCTTGATGTGGCTAAAAATGTAGCCATGGTCGATTCATGGGCTGATTTGTTTTACCGCTCGCCGCCTTCTCGTGCACTGATTGGCGGAGCTGATGATTTGAATTCCCGGTTTATTGACGGCGATCGGATTTCGGAATTGGGGATTTGTGAGGAGTGGTTGGAGAAAGAAGACGCTGTGACATATTCTAGGGACTTCCAAAAGGAGCCGATATTGGTTTCTGGTTCTGATGAGGGGTGGAAATCTTGTGCCATAGGATGTGAATTTCAGGCCAGTCCAAGTAAAGATCCGGATGCTGCTTTTGGTTTAAATCACGAGGGTGGAATGCCTTCAATTATTCGATCCATGGAATCATCCCTATATTATGCAGATAACAATATTGCCCAGGCACGACGGAATGGCTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAATATGATATCATGGCTCCAGTGCAGGCAAAGAATGAGAGTGCCCTTGCAGCTGCTTTCATTTCAAATTGTGGTGCTCGTAACTTCCGACTGGAAGCTCTTGAGGCTCTTGAAAAGCTGAACATCACAATAGATTCCTATGGTGCTTGTCACAGAAATCGTGATGGAAGCACAGTGGACAAATTGGAGACTCTGAAGCACTACAAGTTCAGCTTGGCTTTTGAGAATTCCAACGAGGAAGATTATGTGACTGAAAAATATTTCCAATCTCTAGTTGCTGGAGCTGTTCCAGTGGTTATTGGAGCTCCAAACATTGAAGAGTTTGCTCCTTCACCTGCTTCACTTTTGCATATCAGGGAACTTTCAGATGTTGAGTCAGTTGCCAACTCTATGAAATACCTTGCAGAAAATCCTGAGGCATTCAACAACTCTCTGAGGTGGAAATATGAGGGTCCATCTGATTCTTTCAAGGCACTATTGGACATGGCAGCAGTTCATTCATCATGTCGCCTTTGTATTCATGTGGCAACTGGTATTCATGAGACCGAAGAAAAGGGTCTAGCATTCAAAAATCGACCTTGTAAATGCACTAGAGGTTCGGAGACCGTTTATCACGTGTATGTCAGAGAAAGAGGAAGGTTTAATTCAGAGTCCATTTTCTTGAGGTCCAGTAATCTGACGGTTGAAGGGCTGGCATCAGCAGTGATTTCGAAGTTCAATTCTCTGAAGCACGTACCAATATGGAAGCAGGAGAGGCCTAAAAGCTTAAAAGGAGGGGATGAATTAAGGTTGTACAAAATATACCCAGTTGGGTTGACGCAAAGGCAAGCTTTATATACCTTCAGATTTAAAGAGGACTCTGATCTCAGAAGATATGTGGAAGATAACCCTTGTGCCAAATTTGAAGCCATTTTTGTATAG 1545 44.85 MSITANQRGSRSWTTAEELPVSSGAPLPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSWADLFYRSPPSRALIGGADDLNSRFIDGDRISELGICEEWLEKEDAVTYSRDFQKEPILVSGSDEGWKSCAIGCEFQASPSKDPDAAFGLNHEGGMPSIIRSMESSLYYADNNIAQARRNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQAKNESALAAAFISNCGARNFRLEALEALEKLNITIDSYGACHRNRDGSTVDKLETLKHYKFSLAFENSNEEDYVTEKYFQSLVAGAVPVVIGAPNIEEFAPSPASLLHIRELSDVESVANSMKYLAENPEAFNNSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHVATGIHETEEKGLAFKNRPCKCTRGSETVYHVYVRERGRFNSESIFLRSSNLTVEGLASAVISKFNSLKHVPIWKQERPKSLKGGDELRLYKIYPVGLTQRQALYTFRFKEDSDLRRYVEDNPCAKFEAIFV 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11135376 11140876 + ClCG05G010040.1 Cla05g01076 272566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01076 514 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 491 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cla05g01076 514 MobiDBLite consensus disorder prediction 1 19 - -
Cla05g01076 514 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 491 - -
Cla05g01076 514 Gene3D - 167 363 IPR038577 -
Cla05g01076 514 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 221 385 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cla05g01076 514 MobiDBLite consensus disorder prediction 1 27 - -
Cla05g01076 514 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 112 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g00876 Cla-Chr8:21204407 Cla05g01076 Cla-Chr5:11135376 6.72E-14 transposed
Cla02g00602 Cla-Chr2:6592714 Cla05g01076 Cla-Chr5:11135376 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01076 K00753 - csv:101202837 941.028