Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g01093 | ATGGCAATGCATCGGTACGTACAAGCTGATGATGATGCCCAAACCCATTTGTTTCCGCTCGATTCTTTGTTTTGTGAAGAGGAGAAATGGGAGGAGGAGGAGGAGCAGGAGGAAGATGTAGCTGAGTTAGAACAAACCCATTTCTCTTCTTTGGGATTTTTGGACGAACATCTCTCCGGGGAAGATGAACGGCTTCTCTCCATGTTGTCTAAGGAAACAGAGCAGCTGAAACAGAGCAATCTCCACCTTGAAGCTTTGTTGATGGATCCTTCTATTTCTGCTGCTCGTTCTTCAGCTGTGGACTGGATGCTCAAAGTTCAATCCCATTATGGGTTTTCAACTCTCACTGCCATTTTGGCTGTTGCTTATTTTGACAGATTCCTCCTGAGCTTCCATTTTAAGAGTGACAAGCCGTGGATGAACCAGCTTGTGGCTGTCACTTGCCTCTCTTTGGCGGCTAAAGTGGAGGAGATTCAAGTTCCTCTTCTCTTGGACCTTCAAGTAGAGGATGCTAAGTATGTGTTTGAGGCCAAAACCATTCAGAGAATGGAGCTTCTAGTGCTCTCAACTCTTCAATGGAGGATGCATTTGGTGACTCCATATTCTTTTCTTGATCACATTGTAAAGAGGCTTGGGTTAAAGAACAATCTTCACTTGGAGTTTTTCAGGCGTTCTGAGTATCTTCTCCTCTCTCTACTTTCAGATTCAAGATTTGTGGGTTATCTCCCATCTGTCTTGGCAACTGCAACAATGATGGAAGTGATAGATCAGATTGAGCCTCATAAGACATTGGAGCACCAAGATAAGCTTCTGGGTGTCCTCAAAATGAACAAGGAAAAGGTGCAATGCTGTTACAATCTTGTTGTGGAGCATTCAAAGGCCTATTCCAGTGGCTTTTATCATCCCATCAACTCCCACAAGCGCAAGCATGAACAGCAAGCTCCTGATAGCCCAAGTGGTGTGATTGATGCTGGTTTCAGTTCAGACAGCTCCAATGATTCTTGGGCATTTAGAGCAACATCAGTTTGTTCATCACCTGAACCTTCTTTCAAGAAGAGCAAATCTGAAGAGTCAAAGATGAAATTTCATTCTCTTAACAGGGCCTTTCTGGACATTGTTGGCAGCCCTTCTTGA | 1134 | 44.09 | MAMHRYVQADDDAQTHLFPLDSLFCEEEKWEEEEEQEEDVAELEQTHFSSLGFLDEHLSGEDERLLSMLSKETEQLKQSNLHLEALLMDPSISAARSSAVDWMLKVQSHYGFSTLTAILAVAYFDRFLLSFHFKSDKPWMNQLVAVTCLSLAAKVEEIQVPLLLDLQVEDAKYVFEAKTIQRMELLVLSTLQWRMHLVTPYSFLDHIVKRLGLKNNLHLEFFRRSEYLLLSLLSDSRFVGYLPSVLATATMMEVIDQIEPHKTLEHQDKLLGVLKMNKEKVQCCYNLVVEHSKAYSSGFYHPINSHKRKHEQQAPDSPSGVIDAGFSSDSSNDSWAFRATSVCSSPEPSFKKSKSEESKMKFHSLNRAFLDIVGSPS | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 11320100 | 11321995 | + | ClCG05G010220.1 | Cla05g01093 | 272583 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g01093 | 377 | CDD | CYCLIN | 96 | 188 | IPR013763 | - | |
Cla05g01093 | 377 | Pfam | Cyclin, N-terminal domain | 70 | 195 | IPR006671 | - | |
Cla05g01093 | 377 | SUPERFAMILY | Cyclin-like | 62 | 196 | IPR036915 | - | |
Cla05g01093 | 377 | Pfam | Cyclin, C-terminal domain | 198 | 312 | IPR004367 | - | |
Cla05g01093 | 377 | PANTHER | CYCLIN D3.1 PROTEIN | 43 | 354 | - | - | |
Cla05g01093 | 377 | MobiDBLite | consensus disorder prediction | 306 | 332 | - | - | |
Cla05g01093 | 377 | ProSitePatterns | Cyclins signature. | 96 | 127 | IPR006671 | - | |
Cla05g01093 | 377 | SUPERFAMILY | Cyclin-like | 199 | 260 | IPR036915 | - | |
Cla05g01093 | 377 | Gene3D | - | 67 | 286 | - | - | |
Cla05g01093 | 377 | PANTHER | CYCLINS | 43 | 354 | IPR039361 | - | |
Cla05g01093 | 377 | SMART | cyclin_7 | 202 | 290 | IPR013763 | - | |
Cla05g01093 | 377 | SMART | cyclin_7 | 101 | 189 | IPR013763 | - | |
Cla05g01093 | 377 | SMART | Cyclin_C_2 | 198 | 333 | IPR004367 | - | |
Cla05g01093 | 377 | Gene3D | - | 78 | 196 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g01093 | Cla-Chr5:11320100 | Cla08g01590 | Cla-Chr8:28591192 | 1.77E-99 | dispersed | |
Cla01g01670 | Cla-Chr1:31597532 | Cla05g01093 | Cla-Chr5:11320100 | 5.31E-86 | wgd | |
Cla02g00627 | Cla-Chr2:6991298 | Cla05g01093 | Cla-Chr5:11320100 | 2.33E-91 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g01093 | K14505 | - | csv:101221213 | 634.795 |