Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01102 ATGGGTAGCATTGAAACAGACAGAACTGTAACAGGATTCGCCGCCAAAGACCCATCTGGGATTCTCTCTCCTTACACTTACACTCTCAGAAACACCGGCCCCCAAGATGTTTTCATCAAAGTCATTTGCTGTGGAATCTGCCACTCTGATCTTCACCAAATCAAGAATGAACTCGGCATGTCCAATTACCCCATGGTTCCTGGACACGAGGTGGTCGGGGAAGTGGTGGAGGTTGGATCCGAAGTGGATCGATTCAGAGTTGGGGAGATGGTCGGAGTTGGGTGTATTCTTGGATCATGTTCCAGTTGTAATCCTTGTAATTCCGATAAGGAGCAGTACTGTAACAAGAGAATCTGGACCTATAACGACGTGTATCACGACGGCCGCCCCACCCAAGGCGGTTTCTCCTCCGCCATGGTTGTCCACCAAAAGTTTGTGGTGAGAATCCCAGATGGGATGTCGCCGGAGCAGGCGGCGCCGCTTCTTTGCGCGGGAGTGACGGTGTATAGCCCGCTAAGTCACTTTGGACTGAAACAGAGTGGGCTAAGAGGCGGAATTTTGGGGCTGGGTGGCGTTGGGCATATGGGTGTCAAAGTGGCAAAAGCTTTGGGCCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGAGGAGGCTCTGGAACATCTCGGTGCCGACGAGTACTTGGTCAGCTCCGACAACACTCAAATGGAACGAGCCATTGACTCGCTCGATTACATTATCGACACCGTCCCTGTTTTTCATCCGCTCGAGCCGTATCTCTCACTGCTAAAACTCGACGGAAAATTGATTTTGATGGGTGTCATTAATACCCCATTGCAATTCGTTTCCCCTCTCCTTATGCTGGGGAGGAAGACGATTACAGGGAGCTTCATCGGAAGCATGACAGAGACACAAGAAGTATTGGATTTTTTTAAAGAGAAGGAGCTGAGCTCCATGATTGAAGTGATAAAGCTTGATTACATAAACAAGGCTTTCGAGAGGTTGGAGAAGAACGATGTTAGATACAGGTTCGTCGTCGACATTGCCGGAAGTAAGATGCCTCAGTGA 1074 49.81 MGSIETDRTVTGFAAKDPSGILSPYTYTLRNTGPQDVFIKVICCGICHSDLHQIKNELGMSNYPMVPGHEVVGEVVEVGSEVDRFRVGEMVGVGCILGSCSSCNPCNSDKEQYCNKRIWTYNDVYHDGRPTQGGFSSAMVVHQKFVVRIPDGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADEYLVSSDNTQMERAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMLGRKTITGSFIGSMTETQEVLDFFKEKELSSMIEVIKLDYINKAFERLEKNDVRYRFVVDIAGSKMPQ 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11409366 11411885 - ClCG05G010310.1 Cla05g01102 272592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01102 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cla05g01102 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Cla05g01102 357 CDD CAD1 11 349 - -
Cla05g01102 357 Gene3D - 13 350 - -
Cla05g01102 357 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Cla05g01102 357 SUPERFAMILY GroES-like 17 181 IPR011032 -
Cla05g01102 357 PANTHER ALDEHYDE REDUCTASE 5 357 - -
Cla05g01102 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 5 357 - -
Cla05g01102 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
Cla05g01102 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cla05g01102 357 Gene3D - 164 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01102 Cla-Chr5:11409366 Cla05g01605 Cla-Chr5:27322767 1.99E-115 dispersed
Cla02g00635 Cla-Chr2:7140410 Cla05g01102 Cla-Chr5:11409366 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01102 K00083 - csv:101222395 642.499