Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01247 ATGGCGATTGTGATTTTTCTAACAACACTTTTAGTGATTTTTATTTCATCACTTGCAAAGATTGCATATGATACAGTCTCATGCTACTGGCTGACCCCAAGAAGAATCAGGAAGAAGATGGAGAAACAAGGCGTTCGTGGCCCCGACCCACGGCCGCTGCTCGGAAACATCCTCGACGTAGCGGCATTTGTGGCAAAATCCACTGCCAACGACATGAGCTCGATTGATCACAACATCGTCGACCGCCTATTGCCTCATTACACCACCTGGACAAAGCAATATGGAAAGAGATTTATATATTGGAACGGGATGGAGCCGAGGCTATGTTTGGCGGAGACGGAATTGATAAAAGAAGTATTGAGTAAAAACAGCAATGTGTGTGGGAAATCATGGCTGCAAAGACAGGGAACCAAACATTTCATTGGGAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCATCAACGTCACATCGTTGCACCTGCGTTTATGGGGGATAAGCTCAAGAGCTATGCGGGGATGATGGTGGAGTGCACTAAGAAAATGATCCAATCACTAGAGGCCGAGTTTGACTCGGGCCGGACCGAGTTTGAGATCGCCGATTACATGAAACAACTCACCGCCGACATCATTTGTCGGACCGAGTTCGACGCGAACTCCGACAAGGGCAAAGAAATCTTCCATTTGCTCACTCTTCTCCAGCGCCTCTGCGCCCAAGCCAGCCGCCACCTCTGCCTCCCCGGTAGCCGGTTTTTTCCAAGTAAATACAACAGAGAAATAAAGTCACTGAAAATGGAGGTAGAGAGGTTGTTAATGGAGATTATTCAGAGCAGAAAAGATGGTGTGGAGATTGGAAGAAGTACTTGCTATGGAAGTGATTTGTTGGGAATGCTATTGAATGAAATGCAAAGGAAAAGTGAGGATAATGGTTTCAGCTTGAACTTGCAGCTCATAATGGATGAATGCAAAACTTTCTTCTTTGCTGGTCATGAAACCACTGCCCTTTTGCTCACTTGGACCATCATGTTGCTTGCCACTAACCCTAATTGGCAACAAAAAGTTCGTGATGAGGTCAATCAAGTTTGCAACAATGGTGGAATTCCCTCTGTTGAACATCTCTCTAAGTTCACTTTGCTAAACATGGTGATAAATGAATCGCTAAGGCTTTACCCACCGGCGACGGTGCTTCCAAGAATGGCGTTCGAGGACATAAAAGTAGGAGATTTAGAGATCCCAAAAGGACTATCGATATGGATTCCAGTGCTTGCAATTCATCACAGTGATGAGTTATGGGGAAAAGATGCAAACGAATTCAAACCAGAAAGATTTACCTCAAAACCATTTAGTGGTGGACGTTTCATTCCATTTGCAACTGGACCAAGAAACTGCATTGGCCAAGGATTTGCATTGATGGAAGCTAAGATCATTTTGGCTATGTTTCTCTCAAAGTTTAGCTTCACTATTTCAGATTCTTATCGCCATGCTCCTGTTAGTGTTCTCACCATACAGCCTAAGTATGGAGTTCAAGTTTATTTGACTCCACTCAATTCTAATTAG 1560 44.1 MAIVIFLTTLLVIFISSLAKIAYDTVSCYWLTPRRIRKKMEKQGVRGPDPRPLLGNILDVAAFVAKSTANDMSSIDHNIVDRLLPHYTTWTKQYGKRFIYWNGMEPRLCLAETELIKEVLSKNSNVCGKSWLQRQGTKHFIGKGLLMANGEDWYHQRHIVAPAFMGDKLKSYAGMMVECTKKMIQSLEAEFDSGRTEFEIADYMKQLTADIICRTEFDANSDKGKEIFHLLTLLQRLCAQASRHLCLPGSRFFPSKYNREIKSLKMEVERLLMEIIQSRKDGVEIGRSTCYGSDLLGMLLNEMQRKSEDNGFSLNLQLIMDECKTFFFAGHETTALLLTWTIMLLATNPNWQQKVRDEVNQVCNNGGIPSVEHLSKFTLLNMVINESLRLYPPATVLPRMAFEDIKVGDLEIPKGLSIWIPVLAIHHSDELWGKDANEFKPERFTSKPFSGGRFIPFATGPRNCIGQGFALMEAKIILAMFLSKFSFTISDSYRHAPVSVLTIQPKYGVQVYLTPLNSN 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14366775 14370695 + ClCG05G011760.2 Cla05g01247 272737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01247 519 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 SUPERFAMILY Cytochrome P450 48 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 512 - -
Cla05g01247 519 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 Coils Coil 261 281 - -
Cla05g01247 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 512 - -
Cla05g01247 519 Pfam Cytochrome P450 87 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01247 519 Gene3D Cytochrome P450 29 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00435 Cla-Chr1:4707730 Cla05g01247 Cla-Chr5:14366775 1.30E-111 dispersed
Cla05g00887 Cla-Chr5:8738876 Cla05g01247 Cla-Chr5:14366775 5.32E-112 dispersed
Cla05g01247 Cla-Chr5:14366775 Cla11g00257 Cla-Chr11:2992425 1.24E-112 dispersed
Cla10g00773 Cla-Chr10:14294133 Cla05g01247 Cla-Chr5:14366775 3.21E-39 dispersed
Cla05g01247 Cla-Chr5:14366775 Cla11g00521 Cla-Chr11:5953819 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01247 K10717 - csv:101213604 987.252