Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01271 ATGGCGGCTCCGGCTGACCGGCTCCGCCCTGTTGTGAAGTTTTCCAGCCAGGGGATTCGTTTTGATGAGGATTCTGTGGAGACCCGGCCTCTGCTTTCCAGGATGCTGAATTATCCGATTGGGATTATTCACCACCAGTTGCGCCGCCGTCTTGGTGCCGGGAAGCCCCAGGTGCCAGGGCGACAGCAGTCTTTTAGTCGAGATCTTGGCCATGCAGCTGCGGAAACCCTTCTTATTACTCGGTTGAGCTTCACTCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGGTCGTAAAATTAACTGCTCTTGCAGTTTATGCCATTCTTCTTATGCCCGGTTTTCTTCAAGGTATTTGTTTATATAGCTTATTGCATAACTGCCTTATGTATGATTATTACTTCTCAAGTCAGGTTCGGAGGGATATTATTTATGGAAATCAACCAAGAAATAGCTTGGATTTGTATCTACCTACAAATACTGATAAAAAAAAACCAGTTGTGATATTTGTTAGCGGTGGAGCTTGGATTATTGGGTATAAAGCATGGGGAGCACTTTTAGGACTGCAGTTGGCAGAGAGAGACGTCATTGTAGCCTCAATTGACTATAATGACATGGTGAGAGATGTTTCTCAAGGGATTTCATTTGTATGCAAGAATATAGCAGACTATGGAGGAGACCAAGACAGAATCTTTCTGATGGGACAATCAGCTGGTGCACATATTTCCGTTTGTGCCCTCTTGGAGCAAGCAATCAAAGAAGCCAGAAAAGAAGAGAGTGTAGATTGGAGTGTCTCCCAAATAAAAGCTTATTTTGGTTTATCTGGAGGGTATAACTTGTTGAAACTAGTTGATCACTTTGATTGTCGGGGTCTATACCGTTCCGTCTTTTTGAGTATAATGGAAGGTGAAGAATCTTTGTCCCAATTTTCCCCGGAAATAAGAATCCAAGATCCAAGCATTAGTGATGTTGTACCCAGTTTACCTCCTTTTGTTCTTTTCCATGGCACTGGTGATTATTCAATCCCATCAGATGCCAGCTATGGAACCAGTAAAACTAAAAGAAATCCAATTATGCCCTACATTGAAACTTTTGTGGAGACACTTCGAAAAGCAGGTGTACAAGCTGACCTCTTTCTCTATGAGGGAAAAACTCATACAGATTTGTTCCTTCAAGATCCCTTTAGGGGAGGCAGTTATGAACTTTTTGATCAAATAATTGCCATATTACATGCTGGTGATGATGAAGCCCTCGCAAAGGATTCAATGGCGCCGCCAAAACCGCGCCTTGTTCCAGAGATTTTGATAAGATTGGCACGAATGGTTAGCCCTTTCTGA 1335 43.45 MAAPADRLRPVVKFSSQGIRFDEDSVETRPLLSRMLNYPIGIIHHQLRRRLGAGKPQVPGRQQSFSRDLGHAAAETLLITRLSFTLLRSLGVGYRWVVKLTALAVYAILLMPGFLQGICLYSLLHNCLMYDYYFSSQVRRDIIYGNQPRNSLDLYLPTNTDKKKPVVIFVSGGAWIIGYKAWGALLGLQLAERDVIVASIDYNDMVRDVSQGISFVCKNIADYGGDQDRIFLMGQSAGAHISVCALLEQAIKEARKEESVDWSVSQIKAYFGLSGGYNLLKLVDHFDCRGLYRSVFLSIMEGEESLSQFSPEIRIQDPSISDVVPSLPPFVLFHGTGDYSIPSDASYGTSKTKRNPIMPYIETFVETLRKAGVQADLFLYEGKTHTDLFLQDPFRGGSYELFDQIIAILHAGDDEALAKDSMAPPKPRLVPEILIRLARMVSPF 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15034291 15041028 + ClCG05G012010.2 Cla05g01271 272761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01271 444 SUPERFAMILY alpha/beta-Hydrolases 133 405 IPR029058 -
Cla05g01271 444 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL2-RELATED 39 418 - -
Cla05g01271 444 Pfam BD-FAE 152 346 - -
Cla05g01271 444 Gene3D alpha/beta hydrolase 131 392 IPR029058 -
Cla05g01271 444 PANTHER ARYLACETAMIDE DEACETYLASE 39 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01271 Cla-Chr5:15034291 Cla05g02344 Cla-Chr5:35026993 1.32E-149 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01271 K15889 - csv:101206540 592.808