Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01383 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTTCTCTTGAAGCATCGTTTGCAGAATCTGATCCAAGCTCCACTTGACGAATCGAGCCCTTTCGGAGTCACATCTCGACCCGAAGAAACGGTTGCTTCCGCTAATCCTTTGTTCACCGACGGCGTCGCTACCAAGGATATCCACATCGATCCGTTTACATCTCTGAGCATTCGGATCTTCCTCCCTGAATCTGCTCTTACTCCGCCTGAAACCGACTCCAAACCCTCTTCCAAATCGTCCAAGCCTAAACCTAAACGGTCCAATCAAGATGCTCAAACCGATCTTGTTAATCACAATGTGAATAATGTACAACAGTACCCTTCTCGTCGGAATAGCTATGGCCCTTCGGGAAATACCAGGGAAGAACTGCGGGGTAGTAGATTAGGGGGTTACAGTAATGAAATGGAGGGGTTGAATTTGATTCAAGGCCCTGCCCCTGGTGGCGTTTACAGAGGCTATGCGCCGGTGACGGAGAATAGTCGAAGGTTGCCGGTGATGTTGCAATTTCATGGCGGGGGGTGGGTTAGTGGGAGCAATGATTCGGCGGCCAATGATTTCTTTTGCCGGAGGATCGCAAAATTGTGCGATGTTATTGTCGTTGCCGTCGGGTATCGGCTTGCACCAGAGAACCGATTTCCGGCTGCGTTTGAGGATGGATTGAAGGTGTTGAATTGGTTGGGTAAGCAGGCCAATTTGGCCGAGTGCAGCAAGTCTATGGGGAATACCAAAGGCAATGGCAATGAGTTTAAGAAATCGGATAATCATAGGCATATTGTTGACACATTTGGTGCGTCAATGGTAGAGCCTTGGTTGGCAGCCCATGGAGACCCAACAAGATGTGTTCTTCTTGGGGTTAGCTGTGGAGCAAATGTTGCAGATTATGTGGCTCGAAAGGCTGTGGAGGCCGGTAAGCTCTTGGACCCTGTCAAGGTTGTTGCCCAGGTTCTCCTGTACCCGTTTTTCGTTGGGAGTGTCCCCACTCATTCAGAGTTGAAGCTGGCCAATTCGTATTTTTACGACAAAGCTATGTGCCTTCTTGCTTGGAAGCTATTCCTACCCGAGGAAGAGTTTAGTCTTGACCATCCAGCTGCAAACCCCCTTGTTTCTGGTAGAGAAGGTCCACCTCTTAAGCTCATGCCACCAACGCTGACAGTTGTGGCTGAACTCGACTGGATGAGAGACCGAGCCATAGCTTACTCTGAAGAACTTCGAAAGGTAAATGTCGATGCACCTGTTCTTGACTACAAGGATGCAGTGCATGAATTTGCGACCCTCGATATTCTTCTCAAGACACCTCAAGCCCAAGCTTGTGCAGAGGACATTGCCATCTGGGTCAAAAAATATATTTCACTACGAGGCCACGAGTTCTCTTATTGA 1419 48.98 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDESSPFGVTSRPEETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESALTPPETDSKPSSKSSKPKPKRSNQDAQTDLVNHNVNNVQQYPSRRNSYGPSGNTREELRGSRLGGYSNEMEGLNLIQGPAPGGVYRGYAPVTENSRRLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGNTKGNGNEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFSLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18590629 18594258 - ClCG05G013210.1 Cla05g01383 272873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01383 472 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787
Cla05g01383 472 SUPERFAMILY alpha/beta-Hydrolases 164 463 IPR029058 -
Cla05g01383 472 MobiDBLite consensus disorder prediction 103 133 - -
Cla05g01383 472 PANTHER ARYLACETAMIDE DEACETYLASE 20 452 - -
Cla05g01383 472 Pfam alpha/beta hydrolase fold 180 437 IPR013094 GO:0016787
Cla05g01383 472 MobiDBLite consensus disorder prediction 79 143 - -
Cla05g01383 472 Gene3D alpha/beta hydrolase 35 467 IPR029058 -
Cla05g01383 472 PANTHER CARBOXYLESTERASE 16-RELATED 20 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01383 Cla-Chr5:18590629 Cla03g01599 Cla-Chr3:31768523 3.93E-35 dispersed
Cla05g01383 Cla-Chr5:18590629 Cla11g00796 Cla-Chr11:11540745 7.07E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01383 - - csv:101219102 908.672