Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01409 ATGGGTATCATCATCTCTCTCTTCTCCATTTCTATTTTCATTGTCTTCCTCTTCAGATTCCGACCACCCGCCGGCGACTTTTCTACCCACTCTTCCCCGCCGACGTACCCTCTCATCGGCTGTCTCCTCTCCTTCTACATTAACCGCAACCGCCTCTTGGATTGGTACACTCAGCTCTTGTCGGAATCTGCCACCGGCACTATCGTCGTCCACCGCCTCGGCTGCAGGCGTACGGTGGTGACGGTGAACCCGGTTAACGTGGAGTATATTTTGACGACCCATTTCCTTAATTTCCCTAAAGGGAAGCCTTTCACTGAAATCTTGGGTGACTTTCTTGGCTGCGGTATTTTCAACGTCGACGGCGACCAGTGGCGGACGCAGCGGAAGCTGGCTAGTCACGAGTTTAGCGCCAAGTCTCTTCAGGAATTTGTCGTGAAGACGTTGAAGTCGGAGGTGGAGACGCGGTTGTTGCCCGCCCTCGAGGCATCGGCCGACGATGCTGCTGTCGTGGACTTGCAGAAATTACTAAGAGGATTTGCATTCCGTGTGATATGTAAGATTGTTTTGGGGGGTGAAGAAGAGACAATTTTCGCACTTGAAAAGAGCTTTGGCATAGCGTCGGAGGTGAGCGCCAGGCGAGCGATGGAGCCAGTTTACGCGATATGGAAAATGAAGAGATGGTTTGGGGTTGGATCGGAGCGGCGGCTGAAGACAGCGGTGGCGGAGGTTCACCGGAATGTGATGAACATAATTGACAAAAGAAGGAGGAAGAAGAAGATGGAGGACATCCATGACAGCGAAGATCTCTTGTCCAGTACTAACTCGTTAAAAGTTAATATTAAGCAAGATGAACAAAATCTTCATTATGACAGGTTGATCTCAATCGGGCATGACGATCAGATGATCCGAGACATGGCCATAAGTTTCATCATGGCAGGTCGAGACACGACATCAGCTGCAATGACATGGCTGTTTTGGCTACTCTCCCATCATCCCAACATAGAGAATCAATTAGTAGAAGAGATAGACTTGGAATCTGAAAAAAAATTGAACTACCAATCTCTGAAGGAGCTCAAATTTCTCAAGGCATGTCTCTGTGAAACCATGAGAATGTATCCACCAGTCCCATGGGATTCCAAGCATGCCATTGCCGACGACTACTTGCCCGACGGGACTCTAGTCCGATCTGGAGATAGAGTGACATATTTCCCCTATGGGATGGGTAGAATGGAGGGTTTGTGGGGGAAGGACCAGTTCGAGTTCAAGCCGAGCCGATGGCTCCTTGAACAAGACGGGCGTGGCAGCCGGAGAAGAGGGGTGAAATTGGTTAGTCCATACAAGTTTCCAATATTTCAAGCTGGGCCAAGGGTGTGTTTGGGGAAGGAGATGGCTTTCCTTCAGATGAAGTATGCGGTGGCTTCAATTCTCAGCCAATTCAGAATCAAACCTATTGCCGGCGACCGCCCTGTGTTTATGCCGCTGTTGACGGCGCATATGGCTGGCGGCTTCAAGGTTTTGATTCAAAGGAGAGAGAAAGAGGGCAGAGAAAGAGGCAATTCAACACAAACAAACAAAGTTCCTAATTTAAACAATCAGAAGAAGAGTTGA 1608 49.13 MGIIISLFSISIFIVFLFRFRPPAGDFSTHSSPPTYPLIGCLLSFYINRNRLLDWYTQLLSESATGTIVVHRLGCRRTVVTVNPVNVEYILTTHFLNFPKGKPFTEILGDFLGCGIFNVDGDQWRTQRKLASHEFSAKSLQEFVVKTLKSEVETRLLPALEASADDAAVVDLQKLLRGFAFRVICKIVLGGEEETIFALEKSFGIASEVSARRAMEPVYAIWKMKRWFGVGSERRLKTAVAEVHRNVMNIIDKRRRKKKMEDIHDSEDLLSSTNSLKVNIKQDEQNLHYDRLISIGHDDQMIRDMAISFIMAGRDTTSAAMTWLFWLLSHHPNIENQLVEEIDLESEKKLNYQSLKELKFLKACLCETMRMYPPVPWDSKHAIADDYLPDGTLVRSGDRVTYFPYGMGRMEGLWGKDQFEFKPSRWLLEQDGRGSRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFLQMKYAVASILSQFRIKPIAGDRPVFMPLLTAHMAGGFKVLIQRREKEGRERGNSTQTNKVPNLNNQKKS 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19279806 19284096 - ClCG05G013460.1 Cla05g01409 272899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01409 535 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 SUPERFAMILY Cytochrome P450 31 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 MobiDBLite consensus disorder prediction 511 535 - -
Cla05g01409 535 MobiDBLite consensus disorder prediction 520 535 - -
Cla05g01409 535 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 13 510 - -
Cla05g01409 535 Gene3D Cytochrome P450 28 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01409 535 PANTHER CYTOCHROME P450 13 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01409 Cla-Chr5:19279806 Cla07g00067 Cla-Chr7:791984 1.09E-142 dispersed
Cla05g01409 Cla-Chr5:19279806 Cla06g01736 Cla-Chr6:30917302 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01409 K20665 - csv:101207598 845.884