Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01452 GGGCCCTCCTCTTCCAAATCTGACGATCTCTTTCACTCTTTGTTTCTCCTCTCATCCTTCTTCCTCCATCGCTCTTCGTTTCTGGTTCTCTCTATCTCTCTCGGTACGTATTATCTCCTCACATCTCTCTCTCGCGCTTTACTATCTACTGTTATCTTCTCACGGCTGCCAACGGTTGCGTTTTTTCTATCTACCTATCTCACTAACCATCCACACCAACTCCGACTTCCTAGGGCTTGGATCTTCTCCGATTTGATTCAACAGTTCGCCAAAATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCGGAAGAAAAGGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTCGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTACTACAAGCTCAGGATGATGTAGTAAACAATATGAAAGAGGCAGCATCAAAGGAGCTTCTGAATGTAAGCCAAAATGAACAAGTCTACAGAAATATTTTGAAGGATCTCATTGTTCAGAGCTTGCTCCGGCTGAAAGAGCCAGCTGTTTTATTGCGATGTCGCAAAAGTGACGTCCATTTGGTGGAGTCTGTGCTGGGTTCAGCAGCTGTTGAATATGCAGAGAAAGCACAAGTTCATGAGCCAGAGATCATTGTTGACCATGTCCATCTTCCACCTGGTCCAAGTCATCACCATCATCACGGTCCTTTCTGCTCTGGAGGTGTGGTATTGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGATTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGGTACATTTTCTTCTCAACCATACCATACTGTCTATTACTGGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGATGGACTGGATTCGTCTCTATCATGGTGCTTCCTGTGA 1041 45.44 GPSSSKSDDLFHSLFLLSSFFLHRSSFLVLSISLGTYYLLTSLSRALLSTVIFSRLPTVAFFLSTYLTNHPHQLRLPRAWIFSDLIQQFAKMNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNNMKEAASKELLNVSQNEQVYRNILKDLIVQSLLRLKEPAVLLRCRKSDVHLVESVLGSAAVEYAEKAQVHEPEIIVDHVHLPPGPSHHHHHGPFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEVHFLLNHTILSITGSEKAFSVKLLHDGLDSSLSWCFL 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21935139 21939136 - ClCG05G013920.1 Cla05g01452 272942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01452 346 Gene3D - 183 317 IPR038495 -
Cla05g01452 346 Gene3D - 86 153 - -
Cla05g01452 346 Hamap V-type proton ATPase subunit E [atpE]. 99 316 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cla05g01452 346 Coils Coil 129 152 - -
Cla05g01452 346 Pfam ATP synthase (E/31 kDa) subunit 107 311 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cla05g01452 346 PANTHER BNAC03G72900D PROTEIN 92 318 - -
Cla05g01452 346 SUPERFAMILY V-type ATPase subunit E-like 178 314 - -
Cla05g01452 346 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 92 318 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01452 K02150 - csv:101217221 376.711