Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01495 ATGAAGCAAATACAATTTCCCCTGTTTCCAGACAGCAAAACCATGATCATTTACCTAACAATCTTCTGTCTTGTAATCCCCATCTTCCTCTTCCTTCTCACAGGAAAAAAATCATCCCAAAAGCTTCCTCCAGGTTCGCTAGGGTTTCCATTGATCGGGGAGAGCCTGAGCCTCCTCCGCGCCATGCGAAGCAACACCGCAGAAGAATGGGTGGAGAAGAGGATGAGAAAGTACGGGGCGATCTCGAAGCTAAGCCTGTTTGGAAAACCCACCGTGTTGATCGGAGGGAAGAGCGGGAACAAGTTGATTTTCAGCGGCGATGGCGGAGTAATTTCGAATCAGCAAAATGATTCTCTTAGGGCAATTTTGGGAGAAAGCAATTTGTTGGAGCTGAGTGGAGAAGATCACAAGCGTGTGAGGAATGCATTGGCTTCGTTCTTGAAGCCGGAATGTTTGAGGCAATATGTGGGCAAAATGGATGAAGAAATCAGAGGACATATCAAAATGCATTGGCAGGGCAGACATGAAGTTACTGTATTGCCATTGATGAAAACTCTCACCTTCAACATTGTATGTTCTCTTCTGTTTGGTCTTGAGCAAGGTATGAGAAGAGAAAGAATGGTAGAGTGGTTTCAAGTACTGATAGGCGGAGTATGGTCGATCCCGATAAACTTTCCGTTCACGAGGTACAACCAAAGCCGACGTGCGAGTAGGAGAATCCAAGAGATGCTTAAGGAACTGTTGGATGAAAAGAGAGTTGAATTAGAAGAAAAAGGTGGTTGTTCCTCAAAACAAGATCTAATCACTTGTTTGCTAAGCCTCAGGAATGAAGAAAATGAAGTAATATTGACTGACAAGGAAATTGTGCACAATATTATGTTGGTAATGGTTGCTGGATTTGATACTTCATCGGTTCTTATTACATTCATGATGCGGTTTTTGGCTAATAATTCAACTGTTTATTCTGCTGTTCTTCAAGAACAAGAAGAGATAGCAAGAAGTAAGAAAAGTGGAGAGTTGCTTACTTGGGAAGATCTTGCCAAGATGAAGTACACATGGAGAGTTGCATTAGAGACCCTAAGGTTGGTGGCACCTATTTTTGGAGGCTTCAGAAAGGCTATGAATGATATTGAATTTGGTGGCTACCTTATCCCTAAAGGATGGCAAATATTTTGGACATCACCAGTGACTCATTTGGATGACACCATATTTAGAGATCCATTGAAGTTTGACCCAAATAGGTTCGAGAATCAAGCATCGATTCCACCGTATTGCTTCGTTGGATTTGGCGGCGGTCCGAGAATTTGTCCAGGCAATGAGTTTGCAAGGGTTGAGACTCTTGTTACCATCCATTACTTGATCACCCAATTCACATGGAGGCTACTTTTGGATGACCATTTTATCAGGGATCCAATGCCAACACCTACCAAAGGAATGCCTATCAAAATTTGTCCCAGAGAAACTTCCATGGTATTGTAG 1479 42.73 MKQIQFPLFPDSKTMIIYLTIFCLVIPIFLFLLTGKKSSQKLPPGSLGFPLIGESLSLLRAMRSNTAEEWVEKRMRKYGAISKLSLFGKPTVLIGGKSGNKLIFSGDGGVISNQQNDSLRAILGESNLLELSGEDHKRVRNALASFLKPECLRQYVGKMDEEIRGHIKMHWQGRHEVTVLPLMKTLTFNIVCSLLFGLEQGMRRERMVEWFQVLIGGVWSIPINFPFTRYNQSRRASRRIQEMLKELLDEKRVELEEKGGCSSKQDLITCLLSLRNEENEVILTDKEIVHNIMLVMVAGFDTSSVLITFMMRFLANNSTVYSAVLQEQEEIARSKKSGELLTWEDLAKMKYTWRVALETLRLVAPIFGGFRKAMNDIEFGGYLIPKGWQIFWTSPVTHLDDTIFRDPLKFDPNRFENQASIPPYCFVGFGGGPRICPGNEFARVETLVTIHYLITQFTWRLLLDDHFIRDPMPTPTKGMPIKICPRETSMVL 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24133776 24138231 + ClCG05G014370.1 Cla05g01495 272985

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01495 492 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 Coils Coil 230 250 - -
Cla05g01495 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Cla05g01495 492 PANTHER OS07G0520300 PROTEIN 22 486 - -
Cla05g01495 492 PANTHER CYTOCHROME P450 26 22 486 - -
Cla05g01495 492 SUPERFAMILY Cytochrome P450 39 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 Gene3D Cytochrome P450 34 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01495 492 Pfam Cytochrome P450 43 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01495 - - - cmo:103496862 820.076
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01495 Cla-Chr5:24133776 Cla06g01400 Cla-Chr6:27533301 3.17E-114 dispersed
Cla05g01495 Cla-Chr5:24133776 Cla05g01497 Cla-Chr5:24186335 0 proximal
Cla07g01134 Cla-Chr7:28228219 Cla05g01495 Cla-Chr5:24133776 7.42E-26 transposed
Cla09g02172 Cla-Chr9:39376329 Cla05g01495 Cla-Chr5:24133776 2.33E-96 transposed
Cla10g00337 Cla-Chr10:4377400 Cla05g01495 Cla-Chr5:24133776 1.34E-56 transposed
Cla03g01134 Cla-Chr3:23523395 Cla05g01495 Cla-Chr5:24133776 8.25E-121 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g493 Blo03g00567 . Bda07g00356 . . Bpe08g01128 . . . . . . . . . . . Bhi09g01888 . . . . . . . . . . . . . . . . . Lsi04g01209 . . . . . . . . . Bma07g01302 . . . . . . . . . . . . . . . . . Cla05g01495 Cam05g1612 . Cco05g1641 Clacu05g1593 Cmu05g1495 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60