Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01497 ATGATCACCATAATCCTCCTTCTCATCACCATCTTCCTCTTCCTCAGATTTAGAACAACATTCTCCTCCTCCGCCCAGAAAAACCTTCCTCCTGGGCCACTTGGGGTCCCATTTATAGGCCAAAGTCTCAGCCTCCTTGGAGCCATGAGAACAAACTCAGCAGAGCAATGGCTGCAGCAAAGAGTGGCTAAGTACGGACCAATTTCGAAGATGACCCTGTTCGGGAAGCCGACGGTGTTTGTACATGGGGCGGCGGCGAACAAGGCAGTGGTGTTTTCAGGGGAGGAGGGGGCGGTGTCGAACCGGCAGATTGAGTCTTTGAAGAGTATTTTGGGAAAGAGGAATTTGACGGAGCTGAGTGGTGAGGATCATAAGAGAGTTAGAGGGGCACTGGTTTGGTTCTTGAGGCCTCAGAGCTTGAAAGGCTTTGTGGGGAAGATGGATGGGGAAGTTAGGAAGCATTTGGACATGTATTGGCATGGCAACAAGGAAGTCACTGTGTCGCCATTGATGAAAACTCTGACTTTTGACATCATATGCTCTCTCCTGTTTGGCATTGAAGAAGGGCCAACAAGAAAGAGCATAATAGAATGCTTCAAAACAATGGTGGATGGCATTTGGTCTGTTCCAATCAACCTGCCATTCACAAGGTATAACCAAAGCCTCAAAGCAAGTGCGAAAGCTCAACAGATATTGAAGCAAATTTTGAAAGACAGGACACAAAACCTGCAAGAAGAAGAAGAAGATGATGATGATGATAAAGACCTAATTACTTATTTGTTTAGCATCAAGAACAAACAAAAAGAACAAGCTTTGAGTGAGGAGGAAATTGTGCACAATATCATCCTTCTAATGATTGCTGGACATGACACAACATCAATTTTGATTACTCTTATGCTTAGGGTTTTGGCTAAAAACCCCACTGTTTATGCAGCTGTTCTTCAAGAGCATGAAGAAATAGCTAGAAACAAAGAAAGTGGGGAGGCACTCACCTGGGAAGATGTTTCCAAGATGAAGTACACATGGAAAGTAGCAATGGAAACCTTGAGACTTTACCCACCTGTATTTGGAGGGTTTAGAGTGGCCCTTAAAGACATTCAATTAGGTGGATACACAATTCCAAAAGGATGGCAAATATTTTGGGCAGCACCAATGACCCATCTGGATGAGAAAATATTTGGAGACCCACAAAAGTTTGAACCAAGTAGATTTGATCAAAACCAAACACCAATCCCACCCTTTTCCTTCATTGCATTTGGTGGAGGACCCAGAATTTGCCCTGGCTATGAGTTTGCAAAGCTTGAAACTCTTGTCACTATTCATTACCTAATCACTCAATTCACTTGGAAGCTCACTTCAGAAGATTTCTTAATTAGAGATCCAACTTTGACCCCCAACAAAGGGCTCCCCATCCAAATTTATCCCAAATTATAA 1434 43.44 MITIILLLITIFLFLRFRTTFSSSAQKNLPPGPLGVPFIGQSLSLLGAMRTNSAEQWLQQRVAKYGPISKMTLFGKPTVFVHGAAANKAVVFSGEEGAVSNRQIESLKSILGKRNLTELSGEDHKRVRGALVWFLRPQSLKGFVGKMDGEVRKHLDMYWHGNKEVTVSPLMKTLTFDIICSLLFGIEEGPTRKSIIECFKTMVDGIWSVPINLPFTRYNQSLKASAKAQQILKQILKDRTQNLQEEEEDDDDDKDLITYLFSIKNKQKEQALSEEEIVHNIILLMIAGHDTTSILITLMLRVLAKNPTVYAAVLQEHEEIARNKESGEALTWEDVSKMKYTWKVAMETLRLYPPVFGGFRVALKDIQLGGYTIPKGWQIFWAAPMTHLDEKIFGDPQKFEPSRFDQNQTPIPPFSFIAFGGGPRICPGYEFAKLETLVTIHYLITQFTWKLTSEDFLIRDPTLTPNKGLPIQIYPKL 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24186335 24190429 + ClCG05G014390.1 Cla05g01497 272987

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01497 477 SUPERFAMILY Cytochrome P450 26 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PANTHER CYTOCHROME P450 26 7 474 - -
Cla05g01497 477 Coils Coil 226 246 - -
Cla05g01497 477 PANTHER OS07G0520300 PROTEIN 7 474 - -
Cla05g01497 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Cla05g01497 477 Pfam Cytochrome P450 30 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 Gene3D Cytochrome P450 19 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01497 477 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01497 - - - csv:101212103 823.157
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01134 Cla-Chr3:23523395 Cla05g01497 Cla-Chr5:24186335 8.05E-102 dispersed
Cla05g01497 Cla-Chr5:24186335 Cla06g01400 Cla-Chr6:27533301 8.64E-107 dispersed
Cla05g01495 Cla-Chr5:24133776 Cla05g01497 Cla-Chr5:24186335 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g491 . Blo03g01447 Bda07g00354 Bda09g00395 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01210 . . . . . . . . . Bma07g01303 . . . . . . . . Cpe14g00747 . . . . . . . . Cla05g01497 Cam05g1614 . Cco05g1643 Clacu05g1597 Cmu05g1496 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60