Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01512 ATGAACGTTCAATCTTTGATTTGTTGGGTTTTCCTTTGGAAATTTGTGATACCCAGTTGGATTTCTACCATGATCTCTGCTGTGAAACAGTCTTCTAGGGGTATCCATTGCTCTGATGGTATTATTAGGAGCAAAATCTCGGTTCCCTCTCAGCGATCCTCGTTTCTTCCACCTCTTCCGGTGCAAAAACCTCCAAACTCCGCTGTTTCTTTTCATAAGGCTGTACATGTTTCTTCGCTTGAGAACTTTGGATCACTTCGGGTTCGTAAAGCTAATCTGATAAAATGTGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGAAAAGTCAGGTCCCTTCTGAGGCCGCGAAGAAGGTGAAAATTGGATCCTACTTCGCTCTTTGGTGGGCTTTGAACGTGGTTTTCAATATCTATAACAAGAAGGTGTTGAACGCTTACCCATATCCATGGCTGACATCGACTCTGTCGCTTGCCGCTGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCCGAGGCTCCCAAAACTGACTTCGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGCATGTCCAAGGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCAAGGTTCTTGTTGGGTGAGACCTTCCCACTTCCTGTTTACTTGTCGCTCCTCCCGATCATCGGTGGGTGTGCTCTCGCTGCTGTGACCGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCGAAGAGAGGCATGAAAGGAAAATCTGTTAGCGGGATGAACTACTATGCATGTTTATCAATTTTGTCTTTGTTACTCTTGACGCCATTTGCATTTGCTGTGGAGGGACCAGAATTGTGGGCTGCTGGATGGCAAACAGCAGTTTCTCAAATTGGACCTCATTTCGTTTGGCTGGGGAGCGTCCTAACGTTCCAGGATGAGGAAATGGATTCTATGCCAAGTGTCATAAAAAGCTTAGAAATACTTTTGACTTCTGAAGTGTTAAGCAAGTTTCATGATGTTTGTCATATGATTGAATCTTGTATTGCTGGCTTGAACCTAAACATAATCCTTATCTTTTTTCTTGCATTGCACAATTTATTGTATCGACTGTTTGCTGTTTACTCAATATTGTGGGTTGCAGCACAAAGTATATTCTACCATCTCTATAATCAGGTGTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCAGTCATAGTTTCTTCCATCATCATCTTCCGAACACCTGTGCAGCCAGTCAACGCTCTCGGAGCTGCCATTGCAGTTCTTGGAACCTTCATATATTCTCAGGTGATTACTTGTTCTTTGAATTCGCTCCTCCTCGGTTCTTCTTCATAG 1518 43.48 MNVQSLICWVFLWKFVIPSWISTMISAVKQSSRGIHCSDGIIRSKISVPSQRSSFLPPLPVQKPPNSAVSFHKAVHVSSLENFGSLRVRKANLIKCEAYEAERSQPIESSIELPKSQVPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPELWAAGWQTAVSQIGPHFVWLGSVLTFQDEEMDSMPSVIKSLEILLTSEVLSKFHDVCHMIESCIAGLNLNIILIFFLALHNLLYRLFAVYSILWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQVITCSLNSLLLGSSS 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24598117 24601384 - ClCG05G014540.2 Cla05g01512 273002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01512 505 SUPERFAMILY Multidrug resistance efflux transporter EmrE 169 262 - -
Cla05g01512 505 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 51 346 - -
Cla05g01512 505 PANTHER SOLUTE CARRIER FAMILY 35 418 490 - -
Cla05g01512 505 PANTHER SOLUTE CARRIER FAMILY 35 51 346 - -
Cla05g01512 505 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 418 490 - -
Cla05g01512 505 Pfam Triose-phosphate Transporter family 418 489 IPR004853 -
Cla05g01512 505 Pfam Triose-phosphate Transporter family 127 340 IPR004853 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla05g01512 Cla10g00522 CCT
Cla05g01512 Cla10g00522 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01512 Cla-Chr5:24598117 Cla05g02395 Cla-Chr5:35508534 6.01E-11 dispersed
Cla01g02156 Cla-Chr1:35708258 Cla05g01512 Cla-Chr5:24598117 6.08E-27 wgd
Cla10g00522 Cla-Chr10:6894821 Cla05g01512 Cla-Chr5:24598117 6.98E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01512 K15283 - csv:101220046 592.808