Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01608 ATGGGGGAAAAAGCAAAAATCTTACCTGTGATCTTCAAAATCTCCACCATCGCCAGTGTCATCAGTCCGCCACCATTTTTAACCATGGCGCACTACATGTGGATAAGGGAAAAGCTTGACATTTTCGGCAGTGCGGAACAGAACCCAAACCTCGCCATGCAAACCATTTCTTTATTTGTCTTTTTGGTTTTGGTTCTTTCCGAAAATGCTAAAATAGCTGAAGCTGCTGAAGGTGGAATAAATGGCGTTTATATTGTCTACATGGGATCCGCGTCTGCCTCCACGACTGACTTCCTTCGGCTTCTTACCTCTGTCAACAGGCGAAACGAAGTGGTACACATATATAAACATGGGTTCATAGGATTTGCAGCTCGTCTGTCAGAACAGGAAGCCCATGCCATGAGACAAAGCCCTGGAGTTGTTTCGGTTTTTCCAGATCCAATATTGAAGTTGCACACAACTCATTCATGGGATTTCTTGGTTAGTCAGACTAGCGTCAAAATCGACGCCAATCCCAAATCAGATCCCCCAACCTCTTCCTCTCAACAATATGATACCATTATCGGCATCTTGGACACTGGTATCTGGCCAGAATCGGAAAGTTTTAGTGACAAGGGTCTGAGCCCAATACCGTCGAGGTGGAAAGGTACCTGCATGGTTGGCGATGACTTCACTTCCTCCAACTGTAACAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCAGACAGCGACGGGATAAGGTACCACTCACCTCGAGACGGAGCTGGACATGGCACCCACGTTGCATCAACGGCGGCCGGCAGCGCCGTGGCTAATGCATCATACTATGGCCTCGCAGAAGGGACGGCCAAGGGCGGGTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCGTGGCCGACGGCTGTCATGGGTCGTCAATCATGAAGGCGTTTGATGATGCCATCGCCGATGGGGTCGATGTATTGTCCTTATCTCTCGGGGCACCCTCCTACGTCAAACCAGAGTTGACGGCCGACCCTATTGCCATTGGAGCCTTTCATGCAGTTGAGAAGGGGATTACAGTTGTCTGCTCCGCTGGAAACGACGGCCCCACTTCGGGATCGGTGGTTAACGACGCACCGTGGATAATAACAGTGGCTGCCTCCACCATTGATAGGGATTTTGAGTCTGATGTTGTGTTGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTCAAAAGTCTCCTGTATACCCACTGATACAAGGCAAGTCAGCCAAGAAAGCGAGTGCCAGTGAAGACAGTGCAAGGATTTGTTCTGAAGACTCCATGGACGAAGCTCAAGTGAAGGGAAAGATAGTTATTTGTGAAAACAGTTTCGAAGGAGGCGGTTCTGATTGGCAAGGTCAGGCTGAAACAGTGAAGAATCTTGGAGGGGTCGGGGTAGTTTTGATTGATGACAACTCAAAATTAGTTGCAGAGAAATTTCCTTCTCCCATGACAGTTATTAGCAAAAAGGATGGTGCTGAGGTCCTCTCCTATGTTAAATCAAGCAGGAATCCAGTTGCTACAATCCTGCCCACTGTGACCATAATAAACTATAAGCCAGCGCCTGCTATAGCATACTTTTCATCCCGAGGGCCTAATCTCGCAGTATTAAACCTGATTAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTTGGCAATGATTCAAGCTCTACTCCACAAGCAACAAAGTCACCACTTTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCATGTCTCTGGCGTAGTGGCCTATGTAAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATTAAATCGGCCATCATGACCACAGGCAAGAAATTAACCTCAGAAGAGAAGAAAAAAACAATTCAAACAAATAACTTGGGATCGCCAATGACTTTGGATACGGGATCAATAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCAACGGAGCATTACAACCAGGACTAGTTTATGAAACTAGTACAACAGACTACTTAAACTACCTTTGCAGCCGAGGTTATAACCGGTCCACCATTAAGAACATCTCAACTACTGTTCCTGATGGGTTTGATTGCCCCAAGAATTCAACTGTAGACTACATATCCAACATGAACTACCCATCAATTGCAGTATCCGAATTGAAAGGCAAGGAAAGCAAGAAAGTAACAAGAACGGTTACGAATGTTGGTGGTGCTGGTGAAACAGTTTACACAGTCAGCATAGACGCACCTGAGGAAGTAGATGTCAAAGTGATTCCAGACAAATTGAAATTTGGAAAGAACAATGAGAAGCAGAGTTACCAAGTGATTTTCACCCCAACTGTACCCACACTGCAGAAAGAAGTCCCTGGTTCAATAACTTGGACCAATGGAAAATATCGAGTCCGGAGTCCATTTGTCGTCACTAGTAAGAGTAGTGAGTCATAA 2490 46.22 MGEKAKILPVIFKISTIASVISPPPFLTMAHYMWIREKLDIFGSAEQNPNLAMQTISLFVFLVLVLSENAKIAEAAEGGINGVYIVYMGSASASTTDFLRLLTSVNRRNEVVHIYKHGFIGFAARLSEQEAHAMRQSPGVVSVFPDPILKLHTTHSWDFLVSQTSVKIDANPKSDPPTSSSQQYDTIIGILDTGIWPESESFSDKGLSPIPSRWKGTCMVGDDFTSSNCNRKIIGARFYESSDSDGIRYHSPRDGAGHGTHVASTAAGSAVANASYYGLAEGTAKGGSPGSRIAMYRVCVADGCHGSSIMKAFDDAIADGVDVLSLSLGAPSYVKPELTADPIAIGAFHAVEKGITVVCSAGNDGPTSGSVVNDAPWIITVAASTIDRDFESDVVLGNKKVIKGEGINFSALQKSPVYPLIQGKSAKKASASEDSARICSEDSMDEAQVKGKIVICENSFEGGGSDWQGQAETVKNLGGVGVVLIDDNSKLVAEKFPSPMTVISKKDGAEVLSYVKSSRNPVATILPTVTIINYKPAPAIAYFSSRGPNLAVLNLIKPDISAPGVNILAAWLGNDSSSTPQATKSPLFNVISGTSMSCPHVSGVVAYVKSQNPTWSPSAIKSAIMTTGKKLTSEEKKKTIQTNNLGSPMTLDTGSIATPYDYGAGEISTNGALQPGLVYETSTTDYLNYLCSRGYNRSTIKNISTTVPDGFDCPKNSTVDYISNMNYPSIAVSELKGKESKKVTRTVTNVGGAGETVYTVSIDAPEEVDVKVIPDKLKFGKNNEKQSYQVIFTPTVPTLQKEVPGSITWTNGKYRVRSPFVVTSKSSES 829
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27377695 27383351 + ClCG05G015540.2 Cla05g01608 273098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01608 829 Pfam Subtilase family 185 631 IPR000209 GO:0006508|GO:0008236
Cla05g01608 829 Pfam PA domain 439 509 IPR003137 -
Cla05g01608 829 Pfam Peptidase inhibitor I9 83 152 IPR010259 -
Cla05g01608 829 Pfam Fibronectin type-III domain 724 822 IPR041469 -
Cla05g01608 829 ProSitePatterns Serine proteases, subtilase family, serine active site. 593 603 IPR023828 -
Cla05g01608 829 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 77 824 - -
Cla05g01608 829 Gene3D - 690 825 - -
Cla05g01608 829 Gene3D Peptidase S8/S53 domain 185 686 IPR036852 GO:0004252|GO:0006508
Cla05g01608 829 Gene3D - 387 532 - -
Cla05g01608 829 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 67 152 IPR037045 -
Cla05g01608 829 CDD Peptidases_S8_3 149 627 IPR034197 -
Cla05g01608 829 ProSitePatterns Serine proteases, subtilase family, histidine active site. 258 268 IPR022398 -
Cla05g01608 829 ProSiteProfiles Serine proteases, subtilase domain profile. 156 673 - -
Cla05g01608 829 CDD PA_subtilisin_like 393 525 - -
Cla05g01608 829 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 77 824 IPR045051 -
Cla05g01608 829 SUPERFAMILY Subtilisin-like 181 674 IPR036852 GO:0004252|GO:0006508
Cla05g01608 829 PRINTS Subtilisin serine protease family (S8) signature 592 608 IPR015500 -
Cla05g01608 829 PRINTS Subtilisin serine protease family (S8) signature 183 202 IPR015500 -
Cla05g01608 829 PRINTS Subtilisin serine protease family (S8) signature 254 267 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01608 Cla-Chr5:27377695 Cla08g01069 Cla-Chr8:23380913 0 dispersed
Cla06g00853 Cla-Chr6:12747249 Cla05g01608 Cla-Chr5:27377695 8.05E-08 dispersed
Cla05g01608 Cla-Chr5:27377695 Cla09g00096 Cla-Chr9:943443 1.61E-177 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01608 K25898 - csv:101213415 1308.51