Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01683 ATGGCTTTATTTCGCAAATTCTTTTATCGAAAGCCACCGGACGGGCTTTTAGAGATATCCGAAAGGGTTTATGATACTGCAAATTCAGGTCTTAACTCCCCAAAGCACTCTGTGCGCTACATTGATAAACCAGTGAATGTATCTGCAGTTTTCGACTGTTGCTTTACAACGGAGGTTTTGGAAGAAGACGAATACAAGGTCTATATTGGAGGGATTGTTGGGCAACTTCGTGAGAGTCTCACCGACGCTTCATTCATGGTGTTCAATTTCCGAGAAGGGGAGAATCATAGCCTCGTTACTAATATATTATCTGTATATGATATGACTGTCATGGACTATCCTCGACATTATGAAGGCTGTCCTCTACTCACTATGGAGATGATCCACCACTTTTTAAGATCCAGTGAAAGCTGGCTCTCACTTGGCCAACAGAATGTACTTTTGATGCACTGTGAAAGAGGGGGGTGGCCAGTCTTGGCTTTCATGTTGGCCGCTCTTCTGATTTACAGGAAGCAGTATGCTGGGGAGCAGAAAACTTTGGACATGATTTACAAGCAAGCACCGCGGGAACTTTTGCAGTTGATGTCACCTCTTAATCCATTGCCTTCACAGTTGAGGTATCTTCAATATGTATCAAGAAGAAATGTGGCCTCAGAATGGCCTCCTCTTGACAGGGCTCTTACTCTAGACTGCATAATTATTAGATTTATTCCTAATATGGATGGGGAGGGTGGTTGCCGCCCAATATTTAGAATATACGGACAGGATCCCTTTATGGCTGCTGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGGCAGTATAAGCAGGTAGATTGTGAACTAGTTAAAATTGATATCCATTGCCATATCCAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGAAAGGGAGGAGATGATGTTTCGAGTTATGTTTAACACAGCATTTATAAGGTCAAATATTTTAATGCTTAACCGTGATGACATTGATATTTTATGGCACGCAAAGGATCAATTTCCAAAGGATTTCAGAGCAGAGGTTCTTTTTTCAGAGATGGATGCTTCCGCATCACTTATTTCAGTTGAGTTGCCAAATATTGAGGAGAAAGATGGTCTTCCAATTGAAGCATTTGCTAGAGTTCAAGAGATCTTTAGCAATGTGGACTGGCTAAGCCCAAAGGCAGATGCAGCTCTTAATGTGCTTCAGAAAATAACAGCTTCAAATTTACTTCAAGAGAAACTGGTTAGTTCCGGCTCTTTAGATAGAAACCAGTTGCTCGACTTATCTGTTGAAAAACTAATCTTGGAATCAGAGACATCTGAAGACAATATTGGAAGTCCCCGATTGAAGATACAGACAAAAAAATCTCAGCCTTCTTCCGAACTATCTCAGGCTGCAGGTTCAGAGAGATCAAAGATTGATCCCTCAGAATTGCAGGTTGCTCTCCAACTACCACCTCAGTCTAAAATCATCACCCAAAGAATACCTCAACCTTCATTGTCTACGCCGGCCTCCTTCCGTAGTTCTATGCAAGGTTCACCTCGCCCTATATTAAGATATCACAGTGCACCCTCAGCTCTTGGCATTACAGCTTTATTACAAGATCATTCCAATTTTAGTGGTAAAGAAGTCATACATCCAGCGACAATATCTTCACCATCATCTGCTTTCTTGAGTTCAAGTGGTCTAGATTCACTTAAAGATATTCAACCTTGTATGCTTCCTATTTTGCCTCTCCCGCTAGCAATAGAGCCAAGATCTACATCAGAAAATTCTTCGACCACTGCGTCAACTTCAACCTCTCCCGATCCATTGTCACTTCACCAACTTTCTTTGAAACCTATTAAATCTTCAATTTCTCAACCTCCTCAAGCCACATCACGGGTGAGAAGTCAATTATCACCGTCTTCATTACAACCAACTTCTACCTCTTTTCCTGAGGAGTCCCCACCCTCCTTCAATGAGAGCGAAGCTTCAAGAACCTCTTCCTCTTGTTTGTTAATATCATCTCCATCTTCTTGTACTAAGGAATCATTTTCCATCTCCACCCCTCCCCCTCCCCCTCCCCCCCCTCCTCCTCTTCCCCATCTTGATTCACCTTTGGCTTTAGTAACTTCTCCGTCTTCTAGTAGGGAAAACAGTATTTTCCCATCCTCACCACAACCTCCTTCTACAACACTACTGTTATCCTCTACAAATACATCAATTCCATCTGTTCCTCAATTTTCTTCATCTGATGATTGTCTAGTTTCTTCTCAGTCACCTAAAAAGAACTTGACGAGTGTCTCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCATGTTGTAGCCCTAACTTGGGCGCTAGTGTTGCCTCGCCAACACCAGTGCCCCCACCCCCACCTCCACCTCCTTCATGGAAGGATGCTACAGACACATTCATGCTTGATCCCCCACCTCCACCTCCAGCCCCACCCTTGCCTCCATCTTCTTTCAGTTCAACATCTACTTGTGACTCTAGTATCACGCCTTTAGGGCCACCACCGCCACCACCACCTCCTCCTAGTCATGCACCACAAGATTTTGCCACTGTAGTTAGGAACTTGATGGCTGTATCTGGCCCTCCACCTCCCCCACCTCCCCCACCTCCTCCATCTCATTCTTCTCTAGATCCTAATACTGTATCTTCAGTACCGCCGCCGCCACTCCCTCCTAGTCTTGCACCAAATGTTTCTACAACAACTGTTAACTTGACACATGTCTCTGGCCCCCCTCCTCCTCCTCCACCACCTTTTGCAAATTCTGGTCCCACCTTATGTCCAGGTGCTGTAACGTCAGCTCCTCCTGCTCCGCCTCCTCCAGGTTTCTCAATGAAGGGTTCTGCAACACATGCTCCACCTGCACCCCCTCCTCCAGGTCTCAGTGGTAATAAACTCTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCATTAATAACAGCAACATACCTTCTGTTCCTGGACCACCTTCCAGCGCTCTATTCAATGCCAAGGGACGGGGCCTTGGACGTTTGAACTCCAAAAACCAGTCTCAACCTAAAAGGTCCAATTTGAAGCCATATCATTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCTTATGGGCAGAGACACAAAAGACTGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCCGAACTTGAAAGTCTTTTCTCTGCAGCTGCACCAAATTCAGACTCCGGAGGTTCGGGTGGAAATTCAAATCGCCGAGCCTCAGGGCCAAAATCAGATAAAGTTCATTTGATTGAACTTCGACGGGCCTATAATTGTGAAATTATGCTTTCTAAAGTTAAGATTCCTTTGCCGGATATGATGTGTTCAGTCCTTGCATTGGATGATTCGGCATTAGATGTGGATCAGGTTGAGAACCTAATCAAGTTTTGTCCAACAAAGGAAGAGATGGAATTACTTAAGGGGTACAATGGGGATAAGGACAACTTGGGAAAATGTGAACAATTCTTTTTAGAGTTGATGAAAGTCCCACGAGTAGAGTCCAAGCTAAGGGTTTTTTCTTTCAAGATACAATTCCGATTGCAGGCCTGTGACCTTAGAAATAGTCTGAATACTATCAATTCGGCATCTGAAGAGGCAAGTGGTATCAGAAGTTCGGTAAAGTTGAAAAGGGTAATGCAAACGATCCTTTCATTGGGTAATGCTTTGAACCACGGAACGGCCAGAGGTTCTGCTATTGGATTTCGACTTGATAGTCTCCTCAAACTCACTGATACACGAGCCAGAAACAATAAGATGACTCTCATGCATTATCTATGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTTCCAAAGGACCTTGTTAGTTTGGAAGCTTCTACAAAGATACAACTGAAATACTTGGCAGAGGAAATGCAAGCCATAAGCAAAGGGCTTGAGAAGGTCGTTCAGGAATTGGCTAATTCAGAGAACGATGGGCTCGTTTCAGGAACTTTTTGCCGGACTTTAAAAGACTTTCTTTCTCATGCTGAGGCCGAAGTGAGGTCTCTTGCCTCTCTTTATTCTAATGTGGGTAGAAATGCTGATGCATTGGCTCTCTATTTCGGCGAAGATCCAGCACGTTGCCCTTTTGAGCAAGTTGTTTCTACACTGTTCAATTTCGTGAGGATGTTTGTACGAGCGCATGAAGAAAACTGTAAGCAACTTGATTATGAAAAGAAGAAAGCACAGAAGGAAGCTGCAGAAAAGGAGAAGTTGAAACTCAATACCACAAAGAAGGAGTCAGGATTCTTGATGCAGACTCCGACCTAG 4362 44.06 MALFRKFFYRKPPDGLLEISERVYDTANSGLNSPKHSVRYIDKPVNVSAVFDCCFTTEVLEEDEYKVYIGGIVGQLRESLTDASFMVFNFREGENHSLVTNILSVYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVASEWPPLDRALTLDCIIIRFIPNMDGEGGCRPIFRIYGQDPFMAADRTSKVLFSTPKKSKLVRQYKQVDCELVKIDIHCHIQGDVVLECISLDNDLEREEMMFRVMFNTAFIRSNILMLNRDDIDILWHAKDQFPKDFRAEVLFSEMDASASLISVELPNIEEKDGLPIEAFARVQEIFSNVDWLSPKADAALNVLQKITASNLLQEKLVSSGSLDRNQLLDLSVEKLILESETSEDNIGSPRLKIQTKKSQPSSELSQAAGSERSKIDPSELQVALQLPPQSKIITQRIPQPSLSTPASFRSSMQGSPRPILRYHSAPSALGITALLQDHSNFSGKEVIHPATISSPSSAFLSSSGLDSLKDIQPCMLPILPLPLAIEPRSTSENSSTTASTSTSPDPLSLHQLSLKPIKSSISQPPQATSRVRSQLSPSSLQPTSTSFPEESPPSFNESEASRTSSSCLLISSPSSCTKESFSISTPPPPPPPPPPLPHLDSPLALVTSPSSSRENSIFPSSPQPPSTTLLLSSTNTSIPSVPQFSSSDDCLVSSQSPKKNLTSVSPPPPPPPPPPPPPPCCSPNLGASVASPTPVPPPPPPPPSWKDATDTFMLDPPPPPPAPPLPPSSFSSTSTCDSSITPLGPPPPPPPPPSHAPQDFATVVRNLMAVSGPPPPPPPPPPPSHSSLDPNTVSSVPPPPLPPSLAPNVSTTTVNLTHVSGPPPPPPPPFANSGPTLCPGAVTSAPPAPPPPGFSMKGSATHAPPAPPPPGLSGNKLSNVNGTSSQSHVGINNSNIPSVPGPPSSALFNAKGRGLGRLNSKNQSQPKRSNLKPYHWLKLTRAMQGSLWAETQKTDEASKAPEFDMSELESLFSAAAPNSDSGGSGGNSNRRASGPKSDKVHLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDDSALDVDQVENLIKFCPTKEEMELLKGYNGDKDNLGKCEQFFLELMKVPRVESKLRVFSFKIQFRLQACDLRNSLNTINSASEEASGIRSSVKLKRVMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGLVSGTFCRTLKDFLSHAEAEVRSLASLYSNVGRNADALALYFGEDPARCPFEQVVSTLFNFVRMFVRAHEENCKQLDYEKKKAQKEAAEKEKLKLNTTKKESGFLMQTPT 1453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28487074 28501201 + ClCG05G016340.1 Cla05g01683 273173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01683 1453 MobiDBLite consensus disorder prediction 822 837 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 1084 1102 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 928 943 - -
Cla05g01683 1453 SUPERFAMILY Formin homology 2 domain (FH2 domain) 956 1428 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 1084 1106 - -
Cla05g01683 1453 Gene3D - 221 366 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 771 792 - -
Cla05g01683 1453 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 99 212 IPR029021 -
Cla05g01683 1453 SMART PTEN_C2_2 222 362 IPR014020 -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 879 915 - -
Cla05g01683 1453 Gene3D Formin, FH2 domain 1024 1419 IPR042201 -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 983 1011 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 850 866 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 692 709 - -
Cla05g01683 1453 ProSiteProfiles C2 tensin-type domain profile. 224 363 IPR014020 -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 713 770 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 1025 1039 - -
Cla05g01683 1453 Coils Coil 1409 1444 - -
Cla05g01683 1453 SMART it6_source 695 1453 IPR015425 -
Cla05g01683 1453 Pfam C2 domain of PTEN tumour-suppressor protein 225 362 IPR014020 -
Cla05g01683 1453 PANTHER FORMIN-J 845 1445 - -
Cla05g01683 1453 PANTHER FORMIN-J 1 770 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 462 481 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 799 815 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 596 691 - -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 596 1045 - -
Cla05g01683 1453 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1030 1434 IPR015425 -
Cla05g01683 1453 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 226 363 IPR035892 -
Cla05g01683 1453 MobiDBLite consensus disorder prediction 462 486 - -
Cla05g01683 1453 Pfam Formin Homology 2 Domain 1032 1408 IPR015425 -
Cla05g01683 1453 Gene3D Protein tyrosine phosphatase superfamily 31 216 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01683 Cla-Chr5:28487074 Cla06g01570 Cla-Chr6:29256796 2.89E-20 dispersed
Cla05g01683 Cla-Chr5:28487074 Cla06g01227 Cla-Chr6:25525775 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01683 - - csv:101214019 2129.75