Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g01695 | ATGACGGTTGAACCTAGACTCGATGACCCAATTGACCAATTTCCCACTGGAATGCGTGTTCTCGCTGTTGACGACGATCCCACTTGTCTTTTGATCTTGGAGACTTTGCTTCGTCGTTGCCAGTATCATGTCACTACAACTAATCAGGCTATTATGGCACTCAAGTTGCTGAGGGAGAACAAGAACAAGTTTGATGTGGTTATCAGTGATGTTCACATGCCTGACATGGATGGATTTAAGCTGCTGGAGCTTGTTGGGCTGGAGATGGACCTGCCTGTTATTATGCTTTCTGCAAATGGAGATCCCAAACTTGTTATGAAAGGAATTACTCATGGAGCATGTGATTACTTGTTGAAACCTGTTCGCATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATCAGAAGAAAGAAATTTGATCCAAAGGACCGAATGAATTCTGGCAATCAGGACAGGCCTGATTCTGAAACTGGCGAAGAAGCAGCAGATCCAAATGGGAAATTTAATAAAAAAAGGAAGGACCAGAACTATAACGAAGATGATGACCAGGACTATGGGCAAGAGAACGATGACTCATCGACCCAGAAGAAGCCTCGTGTTGTTTGGTCCGTGGAGCTGCATAGGAAGTTTGTAAATGCTGTCAACCAGTTAGGCATAGACAAGGCAGTGCCTAAAAAGATTTTGGACTTGATGAATGTCGAAAAGCTCACAAGAGAAAATGTAGCTAGCCATCTCCAGAAATACAGGCTTTATCTAAAGAGAATCAGCTGTGTGGCAAACCAGCAAGCTAACATGGTGACTGCATTGAGCAGCGCAGATCCTTCTTATTTGAGAATTGGTTCCCTTAGCGGAATTGGGAATTTCCATTCTTTGACTGGACCTCCACAGTTTCCTAACACTGCTTATAGATCTATCCCAACCACCGGGATGCTTGGTCGATTGAATTCTCCTGCTTGTATGGGTATGCATGGCCTTTCTTCCCCGGGAACAGTCCAACTCAGTAATTTGAACAATTCAAGCAATGATCAGACTACATTTCAGCCAATCATGCTTTCTGGAAACCGTAGTGGGAATATTTTCCGGGGAATGCCTGAGCCATCGGAAATCGATCAACTACAACATGTTAAACATGGGACTCATGCGGACAGTCTCTCTTCTGCTTTTGATGAGAGAACAGTATTTCCTGCTTCCATTGGCCTCCCAAATGCAAACATGTCTTCCGGTACTCTAAGTAATCCTCTTTTAGGATTAACTAATGATCCCTTGATTTCAGAAGTCCAGCATCATGAAGTGAATGGTGGTAGAAAATTTGGAACTCCATCTTCCATTTCGGTAGTATCTTCAAATTCAGATAGCTCACGTCCTTCACTAGATAATGTTAGATGCACCGGTGACAATTGGTCGAATGCTGTTCATTCATCTAGGGTGCACTTGAATACAATTCCATCGAGCAACCTTTCTAATGTTGCTACTTCCTACCATAGTCAGTTGAGAGACAATACTACCAGTGCATTGCATATAGGAAATTGTCTTTCTGACATCTCTTCTATTACTTCAATATCTACTCAGTCCCATGATTCAAGAATAGATTCTCAACGTCAAGCAGCCACAACAAGCAACAGGTTTGATCAAATGATCTCAAAGGTTCCTGTTCAAGATTGGAATGATCATAAAGAGGATTCCTATTACCACACAACTATGGCCTGTAGCTCATCAAATTCTTTGATACCAGTGAATGGTGCTGCAGAGACTTTGCCCAAACGCTTGGAAAATCAGAACATAATCTTCTCCAGCAGCAAGGATTTTAATGTGACTAGTCAAGCAAATGTTCTTGATCATGCAATGGTTGAACATGATCAATTCAAGAAATCAACCATGGAGACATCACTCATGTTGAAACAAGGGTACCTGTATGATCATCAGCAAAAGATGCAATCTAGACTATCATCAAGTAACTGCGGCTCCTTGGAAGACATAGCATGTGCGATGATGAAACAGGAACAAGATGATGGAAAATTATTGGAAGGAGACTTTGGATGTGATAATTATCCCATCGGAACATGCATGTGA | 2070 | 42.03 | MTVEPRLDDPIDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAIMALKLLRENKNKFDVVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKDRMNSGNQDRPDSETGEEAADPNGKFNKKRKDQNYNEDDDQDYGQENDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLSGIGNFHSLTGPPQFPNTAYRSIPTTGMLGRLNSPACMGMHGLSSPGTVQLSNLNNSSNDQTTFQPIMLSGNRSGNIFRGMPEPSEIDQLQHVKHGTHADSLSSAFDERTVFPASIGLPNANMSSGTLSNPLLGLTNDPLISEVQHHEVNGGRKFGTPSSISVVSSNSDSSRPSLDNVRCTGDNWSNAVHSSRVHLNTIPSSNLSNVATSYHSQLRDNTTSALHIGNCLSDISSITSISTQSHDSRIDSQRQAATTSNRFDQMISKVPVQDWNDHKEDSYYHTTMACSSSNSLIPVNGAAETLPKRLENQNIIFSSSKDFNVTSQANVLDHAMVEHDQFKKSTMETSLMLKQGYLYDHQQKMQSRLSSSNCGSLEDIACAMMKQEQDDGKLLEGDFGCDNYPIGTCM | 689 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 28690664 | 28696043 | - | ClCG05G016480.1 | Cla05g01695 | 273185 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g01695 | 689 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 1 | 664 | IPR045279 | GO:0009736 | |
Cla05g01695 | 689 | PIRSF | RR_ARR_type-B | 1 | 689 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Cla05g01695 | 689 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 194 | 253 | IPR017930 | - | |
Cla05g01695 | 689 | MobiDBLite | consensus disorder prediction | 437 | 457 | - | - | |
Cla05g01695 | 689 | MobiDBLite | consensus disorder prediction | 141 | 180 | - | - | |
Cla05g01695 | 689 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 197 | 250 | IPR006447 | GO:0003677 | |
Cla05g01695 | 689 | CDD | REC_typeB_ARR-like | 20 | 134 | - | - | |
Cla05g01695 | 689 | Gene3D | - | 193 | 256 | - | - | |
Cla05g01695 | 689 | SUPERFAMILY | CheY-like | 16 | 142 | IPR011006 | - | |
Cla05g01695 | 689 | SUPERFAMILY | Homeodomain-like | 194 | 254 | IPR009057 | - | |
Cla05g01695 | 689 | MobiDBLite | consensus disorder prediction | 432 | 457 | - | - | |
Cla05g01695 | 689 | Pfam | Myb-like DNA-binding domain | 199 | 249 | IPR001005 | - | |
Cla05g01695 | 689 | ProSiteProfiles | Response regulatory domain profile. | 19 | 134 | IPR001789 | GO:0000160 | |
Cla05g01695 | 689 | Pfam | Response regulator receiver domain | 20 | 128 | IPR001789 | GO:0000160 | |
Cla05g01695 | 689 | MobiDBLite | consensus disorder prediction | 141 | 196 | - | - | |
Cla05g01695 | 689 | Gene3D | - | 17 | 152 | - | - | |
Cla05g01695 | 689 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 1 | 664 | - | - | |
Cla05g01695 | 689 | SMART | REC_2 | 18 | 130 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00679 | Cla-Chr5:6321293 | Cla05g01695 | Cla-Chr5:28690664 | 1.45E-111 | dispersed | |
Cla05g01695 | Cla-Chr5:28690664 | Cla06g00448 | Cla-Chr6:5465586 | 1.46E-109 | dispersed | |
Cla10g01569 | Cla-Chr10:31101821 | Cla05g01695 | Cla-Chr5:28690664 | 7.86E-25 | dispersed | |
Cla11g00324 | Cla-Chr11:3670474 | Cla05g01695 | Cla-Chr5:28690664 | 1.68E-137 | wgd | |
Cla05g01695 | Cla-Chr5:28690664 | Cla06g01213 | Cla-Chr6:25304932 | 2.46E-179 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61107 | PF00072 | Response_reg | 8.90E-23 | CL0304 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g01695 | - | K14491 | csv:101215220 | 1269.99 |