Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01759 ATGTTTAATAAAGATCAATCAACAATGTCCGCCTCGAACATGGCGGCATCTCTAAGCTCTTGGTCCCACGCGCTCGTCAGAATCTCCCCTTACACCTTCTCCGCCATCGGCATTGCCATAGCCATCGGCGTCTCTGTCCTCGGAGCCGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATCAAAGCTCCGCGTGAGAAAGCCGAAGCCTATTTCGATTCTTCTTACTCCAAGTTTACATTTCCTCAGATGTATGTGGAGTTCGATGGAGTATACGCTAATTGTTCAGTATTGCTCTTCACCATCATTCTACAAACAAAACTGGAAACTGTTTCACCATCTCAAATTTATGCTCCTGAGTCTCTAAGAGCAGGATATTCAATTTTTGCTTCTGGGATTATCGTTGGCTTTGCCAATCTTGTTTGCGGGTTGTGTGTAGGGATTATTGGCAGCAGTTGTGCATTATCTGATGCCCAAAACTCATCTCTTTTTGTAAAGATTCTCGTGATCGAGATTTTTGGAAGCGCGCTCGGTTTATTTGGTATAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGAAAAGGCAGTTTAG 612 44.77 MFNKDQSTMSASNMAASLSSWSHALVRISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPREKAEAYFDSSYSKFTFPQMYVEFDGVYANCSVLLFTIILQTKLETVSPSQIYAPESLRAGYSIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGIIVGIIMSAQATWPEKAV 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29416695 29424195 + ClCG05G017160.2 Cla05g01759 273249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01759 203 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 14 200 - -
Cla05g01759 203 SUPERFAMILY F1F0 ATP synthase subunit C 125 193 IPR035921 -
Cla05g01759 203 SUPERFAMILY F1F0 ATP synthase subunit C 29 70 IPR035921 -
Cla05g01759 203 Pfam ATP synthase subunit C 36 96 IPR002379 GO:0015078|GO:0033177|GO:1902600
Cla05g01759 203 Pfam ATP synthase subunit C 133 192 IPR002379 GO:0015078|GO:0033177|GO:1902600
Cla05g01759 203 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 14 200 - -
Cla05g01759 203 CDD ATP-synt_Vo_c_ATP6F_rpt2 128 192 - -
Cla05g01759 203 Gene3D - 31 198 IPR035921 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01759 Cla-Chr5:29416695 Cla11g01536 Cla-Chr11:29002462 9.90E-14 dispersed
Cla05g01759 Cla-Chr5:29416695 Cla08g01299 Cla-Chr8:25908834 3.23E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01759 K03661 - csv:101205012 257.684