Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01791 ATGCCTCGCAAGGTGAGCCACGGGTTAGATTACGATGAAGATTACGATGAAGATTACGATGAGTACGACGATTACGATTATTACGATAACGATTTCGATGCAGAAGAAAAGGTAACAGAAAAAACACCTGAGACTAAGGAAGAAAGAAAGGAGCATAAGCTTTGGCGATGCCCGATTTGCACTTACGACAATGAAGACAGTTTTTCTGTCTGTGATATATGTGGGGTTCTGCGCAACCCTTTGGTCAACAACAGAAATACTCCTGATGATGGAACAGTTGAGAACATCTGCAAAGACTCTGGAGTATCCAAAATGGCCAAGTCTCTCTTTGCATCGTTGCCAAATCAGATACCCAAAAGGGCTGTAAATTTTCAAGAGCAGGACGATAAAATTGTGGAAGAAAGAGAAGAGAACATCCACAAGATTGGAAATATCCGGGGCCATTTGCATGAATTCCATAATGCTTTTAGTACCTGTAGTCATTTCCGTACTAATATAGTTCATGATGGCATTAGATTTCTAACCTCGCTCATGTGGAATGATACAGTCCCCTTCAAGTTTGACATTCCTTCCCCAGATGATGTGGTTTCTAATGGATTGCGTTCCTCGAAAGTTGGTTTAAAAGTCAGCCACAACAACTTCAACTCTTCAATATTATCTTCAGACATCACCAAGAAATCTGCAAATAATGCAGCATTGACTTCAAAAAGTGCACACAGCTCATCTACTGTATTGCCAACGAGCAAATCAGGCAGTATAGGAGATACACAGTTGAGTACCAAAAGTTCAGACAAATCAGGGATATCAATTGGTAAAAGTACAATGGTTAATGAAGAACACAGTGCATCAATTAGTGTAACAAAAAATTTACAACCACGTGATAACCGGTCGTCAAGCACTTCCACATCAAAGTCAGCAGGCAAATTTGGCAGCATGGATGAGAGCCCCAACCCTTCTGTCGAGCAGGAAAAGCCCCAAAGTCTTGCCGGTGGTTTGAACAACATGGTTCTAAATGTCAAATCTGCCTATGCAAATTATATTAGTGGGCTAGGAAAAACGTCAAATGCGCAGTATAAGCATGATAAATGGATGCTACCTGATAAAGCTGTAGACACGCTGACTCAGCTGAATCTTGCTATAGTTGGTCATGTTGATTCTGGAAAATCTACACTCTCAGGAAGACTGCTGCACCTATTGGGACGTGTATCCCAAAAGGAAATGCACAAATATGAAAAAGAGGCGAAGTCCCTGGGCAAGGGTTCCTTTGCTTATGCCTGGGCACTGGATGAGAGTGCAGAAGAAAGAGAGAGAGGAATAACTATGACTGTTGGTGTTGCTTATTTTGATTCTAAAAGATATCATGTTGTTGTGCTCGATTCCCCAGGCCATAAAGATTTTGTTCCAAACCTGATATCTGGGGCCACACAAGCTGATGCCGCGGTTCTTGTTATAGATGCATCTGTTGGTGCATTTGAGGCTGGTATGGATGGTTCAAAGGGGCAAACAAGGGAACATGTGCAATTAATCAGGAGCTTTGGTGTAGATCAGATTATTGTTGCAGTTAACAAAATGGATGTGGTGGAGTACTCCAAAGATCGATATGAATTTATTAAGCTGCAACTTGGAACCTTTATTCGTTCATGTGGTTATAAAGATTCATCATTGTCTTGGATTCCATTGAGTGCCATGGCAAATCAGAATCTAGTGACTGCCCCTTCTGATGTTCAATTTTTGTCCTGGTATCGTGGACCTAATCTTTTGGAGGCGATTGATTCCCTTCAACCACCCACTCGAGAATTCTGTAAGCCACTGCTTATGCCGATATGTGATGTAGTTAGATCACTTTCACTGGGACAAGTGTCTGCCTGTGGCAAACTGGAAGCTGGAGCTCTCCAATCTGGATCTAAGGTTCTTATCATGCCATCTGGAGATAAAGCAACCGTCCGCACTTTAGAACGCAATTCTCAGGCTTGCAAAATAGCAAGAGCGGGGGACAATGTGACTGTTTCTCTACAAGGAGTTGAAGCAAGTAGCGTGATGGCTGGGGGCGTCCTATGCCATCCTGATTTTCCTGTTGCTGTTGCAAGACATTTGGAATTGAAGATTCTCACCTTGGAATTTGCAACACCGATATTAATAGGATCTCAGTTGGAAATTCATATACACCACATGAAGGAGGCTGCTAGAGTTTCAAGGATAGTGTCATTACTCGATTCCAAGACGGGAAAGGTCACGAAGAAGGCACCGCGTTGTCTCAGTGCTAAACAAAGTGCAGTGATTGAGGTCGTTTTACAAAGCCCAGTTTGTGTTGAAGCATTCTCAACTAGTCGAGCTCTCGGGCGGGTATTTTTGAGAGCGATGGGTAGAACCATAGCTGTCGGCATTGTAACCCAACTAATTGGAGATCCTGAATAA 2415 42.65 MPRKVSHGLDYDEDYDEDYDEYDDYDYYDNDFDAEEKVTEKTPETKEERKEHKLWRCPICTYDNEDSFSVCDICGVLRNPLVNNRNTPDDGTVENICKDSGVSKMAKSLFASLPNQIPKRAVNFQEQDDKIVEEREENIHKIGNIRGHLHEFHNAFSTCSHFRTNIVHDGIRFLTSLMWNDTVPFKFDIPSPDDVVSNGLRSSKVGLKVSHNNFNSSILSSDITKKSANNAALTSKSAHSSSTVLPTSKSGSIGDTQLSTKSSDKSGISIGKSTMVNEEHSASISVTKNLQPRDNRSSSTSTSKSAGKFGSMDESPNPSVEQEKPQSLAGGLNNMVLNVKSAYANYISGLGKTSNAQYKHDKWMLPDKAVDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSLGKGSFAYAWALDESAEERERGITMTVGVAYFDSKRYHVVVLDSPGHKDFVPNLISGATQADAAVLVIDASVGAFEAGMDGSKGQTREHVQLIRSFGVDQIIVAVNKMDVVEYSKDRYEFIKLQLGTFIRSCGYKDSSLSWIPLSAMANQNLVTAPSDVQFLSWYRGPNLLEAIDSLQPPTREFCKPLLMPICDVVRSLSLGQVSACGKLEAGALQSGSKVLIMPSGDKATVRTLERNSQACKIARAGDNVTVSLQGVEASSVMAGGVLCHPDFPVAVARHLELKILTLEFATPILIGSQLEIHIHHMKEAARVSRIVSLLDSKTGKVTKKAPRCLSAKQSAVIEVVLQSPVCVEAFSTSRALGRVFLRAMGRTIAVGIVTQLIGDPE 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29796490 29804288 + ClCG05G017490.2 Cla05g01791 273281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01791 804 Gene3D Translation factors 694 801 - -
Cla05g01791 804 CDD EF1_alpha 377 596 - -
Cla05g01791 804 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 697 800 IPR009001 -
Cla05g01791 804 Pfam Elongation factor Tu C-terminal domain 702 799 IPR004160 -
Cla05g01791 804 PANTHER TRANSLATION FACTOR 55 802 - -
Cla05g01791 804 ProSitePatterns Zinc finger RanBP2-type signature. 55 74 IPR001876 -
Cla05g01791 804 MobiDBLite consensus disorder prediction 234 326 - -
Cla05g01791 804 CDD HBS1_C_III 691 799 - -
Cla05g01791 804 Pfam Elongation factor Tu domain 2 624 686 IPR004161 GO:0005525
Cla05g01791 804 Pfam Elongation factor Tu GTP binding domain 376 593 IPR000795 GO:0003924|GO:0005525
Cla05g01791 804 PANTHER OS04G0595300 PROTEIN 55 802 - -
Cla05g01791 804 SUPERFAMILY Translation proteins 595 690 IPR009000 -
Cla05g01791 804 SUPERFAMILY Ran binding protein zinc finger-like 51 78 IPR036443 -
Cla05g01791 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 612 IPR027417 -
Cla05g01791 804 Gene3D - 367 597 IPR027417 -
Cla05g01791 804 Gene3D Translation factors 601 690 - -
Cla05g01791 804 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 373 604 IPR000795 GO:0003924|GO:0005525
Cla05g01791 804 PRINTS GTP-binding elongation factor signature 436 444 IPR000795 GO:0003924|GO:0005525
Cla05g01791 804 PRINTS GTP-binding elongation factor signature 472 483 IPR000795 GO:0003924|GO:0005525
Cla05g01791 804 PRINTS GTP-binding elongation factor signature 517 526 IPR000795 GO:0003924|GO:0005525
Cla05g01791 804 PRINTS GTP-binding elongation factor signature 377 390 IPR000795 GO:0003924|GO:0005525
Cla05g01791 804 PRINTS GTP-binding elongation factor signature 456 466 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01791 Cla-Chr5:29796490 Cla09g01994 Cla-Chr9:37509304 4.67E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01791 K14416 - csv:101219939 1337.4