Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01799 ATGAAAATCCAAACTTTTCTTTTTCTTCTTCTTTCAACTTGCTGTTTTGCTCAGCTTCACTTCAACTATTACCATAATTCATGTCCAAATGTTGAGTCCATTGTAAGAGATGCAGTGAAACAAAAATTTCAACAAACTTTTGTCACTGCCCCTGCCACTCTAAGGCTCTTCTTTCATGATTGTTTTGTCAGGGGTTGTGATGCTTCTGTGTTGATTCAAACAAACAACCACACTTCAGAGAAAGATAATGCAGAGAATCTTTCACTCGCTGGAGACGGGTTCGACACCGTGATCAAAGCTAAAGCTGCTGTCGATAGCGTGCCGGGATGTAAGAATAAGGTCTCTTGTGCTGACATATTGGCTTTGGCTACTAGAGATGTTGTAGTTTTGACAGGAGGACCGTCGTATGCCGTCGAGTTGGGAAGACGAGACGGGCGGATCTCGACAAGAAAGAGCGTTCGACACCATCTTCCTCAGCCTGATTTTGGATTAAATCAACTCAATGCCATGTTTGCAAAACATGGTCTAACTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATTGGATTCTCACATTGCAAGCATTTCTCCAAAAGGCTATATAGTTTCCACAGCAAAAACAGAATCGACCCGACGTTCAATCCAAAGTACGTTGATGAGCTCAAGAAGGAATGCCCGAGAAACGTCGACCAGAGAATCGCGGTCGACATGGACTCGACATCATCGTTCACATTCGACAACATGTACTTCAAGAATCTACAAATGGGAAAAGGACTGTTCACCTCAGACCAAGTATTGTTCACTGATCCAAGATCAAGAAAAACAGTGAACTTATTTGCTTCCAACAATACAGCTTTTGAGGAGGCATTTGTAGTTGCAATGACAAAGCTTGGGAGAGTTGGAGTCAAAACAAGAAACCAAGGGGAGATTAGAGTTGACTGTTCATCAGTGAACTAA 963 42.37 MKIQTFLFLLLSTCCFAQLHFNYYHNSCPNVESIVRDAVKQKFQQTFVTAPATLRLFFHDCFVRGCDASVLIQTNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPGCKNKVSCADILALATRDVVVLTGGPSYAVELGRRDGRISTRKSVRHHLPQPDFGLNQLNAMFAKHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPKYVDELKKECPRNVDQRIAVDMDSTSSFTFDNMYFKNLQMGKGLFTSDQVLFTDPRSRKTVNLFASNNTAFEEAFVVAMTKLGRVGVKTRNQGEIRVDCSSVN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29898887 29900517 - ClCG05G017560.1 Cla05g01799 273289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01799 320 Gene3D - 22 320 - -
Cla05g01799 320 Gene3D Peroxidase, domain 2 158 299 - -
Cla05g01799 320 PANTHER - 5 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 CDD secretory_peroxidase 18 319 IPR033905 GO:0004601|GO:0042744
Cla05g01799 320 Pfam Peroxidase 35 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 ProSiteProfiles Plant heme peroxidase family profile. 18 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PANTHER PEROXIDASE 5 320 - -
Cla05g01799 320 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 SUPERFAMILY Heme-dependent peroxidases 18 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla05g01799 320 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Cla05g01799 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01701 Cla-Chr1:31950093 Cla05g01799 Cla-Chr5:29898887 1.78E-148 dispersed
Cla05g01799 Cla-Chr5:29898887 Cla11g00913 Cla-Chr11:15495659 1.40E-127 dispersed
Cla05g01799 Cla-Chr5:29898887 Cla02g01190 Cla-Chr2:25463472 3.98E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01799 K00430 - csv:101218982 613.224