Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01840 ATGATACCGAGAAAAATGGATGATTTTTTGGCGAGTGTGCCTGTGGGAGTGGGTGCAATATTGTTCACGACTTTGTGCGTCGTGGGAGGTGGGTTGGTTTATTTCTATGGACCGTACTGGGGAGTGAGAAGGGTGCCTGGTCCACCAGCTATCCCGCTGGTCGGACACCTTCCCTTGCTGGCTAAGTACGGTCCAGACGTTTTCTCTGTTCTCGCCTCCCAATATGGTCCTATCTTCAGGTTCCATATGGGTAGGCAGCCATTGATAATTATAGCAGACCCTGAGCTTTGTAAAGAAGTCGGTATCAAGAAATTCAAGGACATCCCAAACAGAAGTGTCCCTTCTCCAATATCAGCTTCCCCGCTTCATCAGAAAGGTCTTTTCTTCACAAGGGATGCAAGATGGTCGACAATGCGAAACACCATACTATCGGTCTATCAGCCCTCTCATCTAACGAGCCTAGTACCTACTATGCAATCAATCATTGAAACTGCAACTCAAAATCTCCATTCCTCTGTCGAGGAAGATATCTCTTTCTCCAATCTCTCCCTCAAATTGACCACTGATGTGATCGGAACAGCAGCCTTTGGTGTCAACTTTGGGCTCTCTAATCCACAAGCAACCAAAACCTGTGGTACCAATGGCAATGACAGCAAAAATGAAGTTTCGGACTTCATCAATCAACATATCTACTCTACAACGCAGCTCAAGATGGATTTGTCGGGTTCCTTCTCAATCATTTTGGGACTACTTATCCCTATACTCCAAGAACCATTTAGACAAGTCCTGAAGAGAATACCATTCACCATGGACTGGAAAGTTGACCGGACAAATCAGAAGTTGAGTGGTCGGCTTAATGAGATTGTTGAAAAGAGAATGAAGTGTAACGATCGAGGTTCAAAAGACTTCTTATCACTCATTTTGAGAGCAAGAGAATCAGAGACGGTGTCACGGAATGTATTTACTCCAGACTACATCAGTGCAGTGACGTACGAACACCTACTTGCTGGATCAGCTACTTCAGCATTCACGCTGTCTTCTGTTGTATACTTAGTTGCTGGACATCCAGAAGTCGAGAAGAAGTTGCTTGAAGAGATTGACAACTTTGGTCCATCAGATCAGATACCAACAGCTAATGATCTTCAGCAGAAGTTTCCATATCTTGATCAGGTGATTAAAGAGGCTATGAGATTCTACACTGTTTCCCCTCTAGTAGCTAGGGAGACATCTAAAGATGTAGAGATTGGTGGATATCTTCTTCCAAAGGGGACATGGGTTTGGTTAGCACTTGGAGTTCTTGCCAAGGATCCAAAGAACTTTCCAGAACCAGATAAATTTAAGCCAGAGAGGTTTGATCCGAATGAGGAAGAGGAGAAACAAAGGCATCCCTATGCTTTAATCCCATTTGGAATTGGTCCTCGAGCATGCATTGGTCAAAAATTCGCCCTTCAGGAATTGAAGCTCTCTCTGATCCATTTGTATAGGAAGTTTGTATTTCGGCATTCCCTCTCCATGGAACAACCTCTTGAACTTGAGTATGGTGTCATTCTCAACTTCAAGAATGGTGTCAAGCTCAGAGTGATAAACCCATGCCCCGACACGGGAGTTGTGGACGTGCAGATTGAAGATGAAGCAGAGCTTTCATCATACCAGAAATCAGAACTTGGGCTAGAACAAGAACGAGTTTGCCCACTTGAGGGAGGTTTAGCAGAAATCCTAGTTGATACATTGTTCTTCCTAACTTTCACCAAGCTTGGTTCAGAACTTTTGGAATGTTTAGACACAACAGACTCTACACAGCTCTTTGAAGGCGGAGTGACCTCAAATGATTCAGTGCGAGATTGTTCCATCAACCTCGTCTCCCATGGCTTTGCTGCCATCCATCTCTCCAACCAACTCCATCCCGAATTGTTCTTGTCAAACTCCTTGCTTCAAGAGATCAGCTTTGCTGCGATGTTCATTAAGCAATTGCTGCACGGCCTGCCCCTCGACCGACATTCTCACACGACGTGCCCTGACTCGAGCTTGAACTCGAACCAGAGCCTGCATGCATCTCAGTGTAACAGCTGCCTGCTTCCTCACCAAACGACCCCTCACCAGAGCTTGAAGCCTCACCACTCCCTTCAAGGCCCTAAGAGCCCTCCTAGACTGCAAAAATGTCCATTACCAAATCAGTAA 2178 45.36 MIPRKMDDFLASVPVGVGAILFTTLCVVGGGLVYFYGPYWGVRRVPGPPAIPLVGHLPLLAKYGPDVFSVLASQYGPIFRFHMGRQPLIIIADPELCKEVGIKKFKDIPNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLTSLVPTMQSIIETATQNLHSSVEEDISFSNLSLKLTTDVIGTAAFGVNFGLSNPQATKTCGTNGNDSKNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLIPILQEPFRQVLKRIPFTMDWKVDRTNQKLSGRLNEIVEKRMKCNDRGSKDFLSLILRARESETVSRNVFTPDYISAVTYEHLLAGSATSAFTLSSVVYLVAGHPEVEKKLLEEIDNFGPSDQIPTANDLQQKFPYLDQVIKEAMRFYTVSPLVARETSKDVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPNEEEEKQRHPYALIPFGIGPRACIGQKFALQELKLSLIHLYRKFVFRHSLSMEQPLELEYGVILNFKNGVKLRVINPCPDTGVVDVQIEDEAELSSYQKSELGLEQERVCPLEGGLAEILVDTLFFLTFTKLGSELLECLDTTDSTQLFEGGVTSNDSVRDCSINLVSHGFAAIHLSNQLHPELFLSNSLLQEISFAAMFIKQLLHGLPLDRHSHTTCPDSSLNSNQSLHASQCNSCLLPHQTTPHQSLKPHHSLQGPKSPPRLQKCPLPNQ 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30291502 30297027 + ClCG05G017960.2 Cla05g01840 273330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01840 725 Gene3D Cytochrome P450 36 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 MobiDBLite consensus disorder prediction 696 725 - -
Cla05g01840 725 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Cla05g01840 725 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PANTHER THROMBOXANE-A SYNTHASE 15 529 - -
Cla05g01840 725 Pfam Cytochrome P450 46 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01840 725 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 529 - -
Cla05g01840 725 SUPERFAMILY Cytochrome P450 38 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01840 Cla-Chr5:30291502 Cla05g01983 Cla-Chr5:31648354 3.37E-34 dispersed
Cla05g01840 Cla-Chr5:30291502 Cla11g00257 Cla-Chr11:2992425 2.51E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01840 K20771 - csv:101209772 987.252