Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g01958 | ATGTATATTCTTGTGGTTTTAGGTCTTGTTTTTGTCGGAATCGTCTTCAAATTTGTGTACGCCAATTTATGGGTTCCGTGGAGAATTCAAACCCACTTCAAAAACCAAGGGATAACAGGGCCTTCCTACCGTCCGATCATCGGTAACGCCACCGATATCCGCCGTCTGTACAAGGAGGCGAATGCGAAACCAATTCCGCTGACCCACAATATAGTGTGTCGGGTGCTGCCTTATATTCACCGGTGGTCCGAGGAGTACGGGAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGGTTGGCGATATCCGACCCAGAAATGATTAAGGAGGTGCTTACCAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACCCCGGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTTGGACTCGAGGGCGAACAATGGGTCGTCCACCGGAGAATCGCAAATCAGGCTTTCACTATCGACCGTGTGAAGGGGTGGTTACCAGAGATTGCGTTGAGTGTTTGTAATGTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAGGGAGGAGTTTGAATTAGATGTCCATAAACAACTTCGTCTCCTCACAGCAGACGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTACAGATTTTTGCCTACCAAGGGGAATAGAGAGAGGGAGAGGCTGGAAAAAGAAACTCGTGCATCAATAAAAGCACTAGTCGAAAGTGAGAAAAATAGCAAAGAAAGGGAAGACTCAACAAATCTACTCAGCCTCTTACTGTCATCTTACAAGAACCAAAATGGGGAAATAGAAAAACTTGGAGTGGAGGAAGTTGTAAATGAATGCAAGACATTCTACTTTGCAGGGATGGAAACAACTGCCAATCTTTTAACTTGGGCCCTTTTACTACTAGCACAGCATCAAGAATGGCAAGATCGAGCTCGACAAGAAGTCATCAATGTTTGCGGCCACAAGACACCGCCCGTGGCCGATAATCTAACTGAACTTAAACTAGTGGGTATGATAGTCAATGAAACACTTCGACTTTATCCTCCTGCGGTGATGATGATGCGACGGACAACAAAACGGTTGACACTAGGAAAGGTCGACGTGCCAGAAGGCACACAACTTCAACTTTCAATTGCTGCAATCCACCATGACACAGAGCTTTGGGGAGAAGATGCGAGCAGCTTCAACCCTATGAGATTTAGTGAGCCTAGGAAGCATCTAGCTTCATTTTTGCCATTTGGATTGGGTCCAAGAATTTGTGTAGGGCAACATTTGGCTCTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAGCGATTCTCTTTTACGATTTCTCCAACCTACACGCATGCCCCTATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAACTCCTTGTTAGGAGCTTATGGAATTGA | 1518 | 44.86 | MYILVVLGLVFVGIVFKFVYANLWVPWRIQTHFKNQGITGPSYRPIIGNATDIRRLYKEANAKPIPLTHNIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVVHRRIANQAFTIDRVKGWLPEIALSVCNVLEKWEEMKGGREEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERERLEKETRASIKALVESEKNSKEREDSTNLLSLLLSSYKNQNGEIEKLGVEEVVNECKTFYFAGMETTANLLTWALLLLAQHQEWQDRARQEVINVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKRLTLGKVDVPEGTQLQLSIAAIHHDTELWGEDASSFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYTHAPMMFVSLNPQFGVQLLVRSLWN | 505 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 31393896 | 31395931 | + | ClCG05G019156.1 | Cla05g01958 | 273448 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g01958 | 505 | PANTHER | CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 | 5 | 498 | - | - | |
Cla05g01958 | 505 | SUPERFAMILY | Cytochrome P450 | 36 | 501 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | Pfam | Cytochrome P450 | 79 | 483 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 5 | 498 | - | - | |
Cla05g01958 | 505 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | E-class P450 group I signature | 107 | 128 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | E-class P450 group I signature | 199 | 217 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | Gene3D | Cytochrome P450 | 27 | 499 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g01958 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g01956 | Cla-Chr5:31380569 | Cla05g01958 | Cla-Chr5:31393896 | 0 | dispersed | |
Cla05g01958 | Cla-Chr5:31393896 | Cla06g01075 | Cla-Chr6:23355972 | 3.83E-143 | dispersed | |
Cla05g01957 | Cla-Chr5:31385796 | Cla05g01958 | Cla-Chr5:31393896 | 0 | tandem | |
Cla05g01958 | Cla-Chr5:31393896 | Cla05g01959 | Cla-Chr5:31398839 | 4.08E-28 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g01958 | - | - | csv:101210785 | 899.812 |