Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01977 ATGTTAGGAAAAAGACACGTAAAAGAGTCAGATGTGAAAAATCTATCATATCTCCAAGCTATTATTAAGGAAACTCTACGGTTGTATCCTGCTGCACCACTCTTAGCCCCTCATGAATCCATAGAAGATTGCACGACTGCTGGCTACCACATCTCCAAAGGGACACGCCTGATATTTAATATTCAAAAGCTTCAAAAAGACCCACTTGTTTGGGAGGATCCTTGTGAATTTCGTCCAGAAAGATTTCTAACGACTCAAAAGGATTTTGATGTTAGAGGACAGTCTCCCCAATTGATACCATTTGGAAATGGTCGAAGGATGTGCCCTAGGATCTCTTTTGCCCTCAAAATTATGCATCTTACACTTGCAAACTTTCTTCATGGGTTTGTGATTAATAGGCCATCAGAAGAACTGGTTGACATGGAGGAGAGTGATGGATTGACCAGCCTTAAAAAAGCTCCACTCCAAGTTGTTTTAACTCCACGTCTACCTGCCCATATTTATGAGTAA 510 40.78 MLGKRHVKESDVKNLSYLQAIIKETLRLYPAAPLLAPHESIEDCTTAGYHISKGTRLIFNIQKLQKDPLVWEDPCEFRPERFLTTQKDFDVRGQSPQLIPFGNGRRMCPRISFALKIMHLTLANFLHGFVINRPSEELVDMEESDGLTSLKKAPLQVVLTPRLPAHIYE 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31566581 31569790 - ClCG05G019315.1 Cla05g01977 273467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01977 169 PANTHER CYTOCHROME P450 82C3-RELATED 4 169 - -
Cla05g01977 169 Pfam Cytochrome P450 4 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 SUPERFAMILY Cytochrome P450 4 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 PRINTS E-class P450 group I signature 19 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 PRINTS E-class P450 group I signature 60 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 PRINTS E-class P450 group I signature 98 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 PRINTS E-class P450 group I signature 108 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 PRINTS P450 superfamily signature 20 31 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 PRINTS P450 superfamily signature 99 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 Gene3D Cytochrome P450 1 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01977 169 PANTHER CYTOCHROME P450 4 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01977 Cla-Chr5:31566581 Cla05g01982 Cla-Chr5:31638218 4.10E-82 dispersed
Cla05g01972 Cla-Chr5:31531209 Cla05g01977 Cla-Chr5:31566581 9.31E-73 proximal
Cla05g01977 Cla-Chr5:31566581 Cla05g01978 Cla-Chr5:31571897 9.08E-07 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01977 - - csv:101212976 280.026