Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01986 ATGTCATTGTTACTAAATAACCCAGGTGTCCTTGAAAAGGCACAACAAGAGCTTGACGCAGTGGTGGGGCGAGAGAGGCGAGTGAATGAGTCGGACATAGGCAAGCTTGTTTATTTACAATCCATAATCAAAGAAACGATGCGAATGTACCCAGCAGGGCCTTTACTGGGGCCTCGTGAGTTCTACAAGGACTGTGTGGTGGCTGGCTACTTTGTCCCCAAAGGGACCCAATTGATCCCAAACATTTGGAAGATCCAAACCGATCCACGTGTTTGGCCTAACCCGTTCGAGTTCAAGCCAGAGCGGTTCTTGACGACCCATAAAGACGTTGATTTGAAAGGAAATAATTTCGAGTTGATTCCGTTTGGGAGTGGAAGGAGAGGGTGCCCTGGAGTTGCGTTTGGGCTCCAAATGGTGCATTTCACTTTGGCTGGATTTTTACACTCATTTGATGTAAAAAATCCGAGCAAGGAACCTATTGATATGTCCGAGAATTTCGGATTCGCCAATGAAAAAGTGGTTCCTCTCAATGTTTTGGTCACTTCACGGTTACCTTCTCATCTTCACACCGTCAATTAG 579 46.11 MSLLLNNPGVLEKAQQELDAVVGRERRVNESDIGKLVYLQSIIKETMRMYPAGPLLGPREFYKDCVVAGYFVPKGTQLIPNIWKIQTDPRVWPNPFEFKPERFLTTHKDVDLKGNNFELIPFGSGRRGCPGVAFGLQMVHFTLAGFLHSFDVKNPSKEPIDMSENFGFANEKVVPLNVLVTSRLPSHLHTVN 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31665818 31666396 - ClCG05G019390.2 Cla05g01986 273476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01986 192 PRINTS E-class P450 group I signature 129 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 PRINTS E-class P450 group I signature 119 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 SUPERFAMILY Cytochrome P450 1 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 PRINTS P450 superfamily signature 120 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 122 131 IPR017972 GO:0005506|GO:0016705
Cla05g01986 192 PANTHER CYTOCHROME P450 82A2 1 188 - -
Cla05g01986 192 PANTHER CYTOCHROME P450 82C3-RELATED 1 188 - -
Cla05g01986 192 Pfam Cytochrome P450 3 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01986 192 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01984 Cla-Chr5:31656705 Cla05g01986 Cla-Chr5:31665818 1.01E-112 dispersed
Cla05g01986 Cla-Chr5:31665818 Cla05g01989 Cla-Chr5:31699386 4.22E-67 dispersed
Cla05g01986 Cla-Chr5:31665818 Cla05g01987 Cla-Chr5:31681952 2.56E-77 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01986 - - csv:101213457 362.844