Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g01997 ATGGCGGTTGTCACTGATCCTCTTGCTTCCATGCAGCTTCTCGCCAATACCCTTCAGGCTCCGCCCTATGCGGCAGCCGCCGTTCTGGGTGGCGTCTCTTTAATGCTTTCGGTGTTTCTTGTCGCTGATTGTAGAAAGAAACGTCGGAAATTTCTCCCTCCAGTGCCGGGTAATTATCGGCTTGTTGTCACTCTGTTTTCAATCATGGTGGAACTGATCGATTACTCGATTCCGGGGGTGCCGCTGTTGGGAAATCTGTTGCAGTTGAAGGAGAAGAAGCCTCACATGACGTTTGCACGGTGGGCCGAGACGTACGGTCCGGTTTATTCCATAAGAACCGGCGCTTCCACTGTGATTGTTCTCAACACCGCCGAAGTTGCCAAAGAGGCTATGGTGACGAGATACGCTTCTATTTCTAGTAGAAAGCTAAGCAAAGCCCTCACCATCTTGACTGCTGATAAATGCATGGTTGCTATGAGTGATTACAATGACTTTCACAAGATGGTGAAGAGATACATATTGGCGAATGTCTTGGGGGCTAATGCTCAGAAGAAACACAGACAAAGGAGAGACACCATGATAGAGAATATTTCTAGGGAGTTGTTTGCTCATCTGAAGGATTTTCCATCAGAAACTGTTAATTTTCGAAAAATCTTCGAAGCAGAACTCTTTCGACTGGCTCTTAAAGAAACACTTGGGAAAGATGTTGAGTCGATATATGTCGATGGGCTCGGTACCACACTGCCAAGGGAAGTTCTGTTTAGGGTTTTAGTGATAGATCCAATGGAGGGTGCAATTGAGGTTGATTGGAGGGATTTCTTCCCATATCTGAGATGGATTCCCAACAAGAGTGTGGAGAATAGAATAAAGAATATGGATTTTCGAAGGCGAATGACAATGAAAAGCCTACTTGAGGAGCAGAAGAAACGAATTGCAGCAGGGGAGGAAACGAATTGCTATGCTGATTTCCTGTTATCTGAAGCAAAAACACTTACAGAGGATCAGATATCGATGTTACTTTGGGAGACGATCATTGAAACCTCAGACACGACTCTGGTTGACTATCTGTATCAGCATATACTGAATGTCTGTGGATCTGCAAAGCTTACTGAAGAAAACCTGTCACAGCTTCCATATTTAACTGCTGTTTTTCATGAAACTCTTCGGAGGCATAGTCCAGTCCCGGTCGTCCCATTGCGATATGCACATGAAGATACCCAGTTAGGTGGGTACTTTGTTCCTGCAGGGAGTGAGATCGCTGTGAACATTTACGCGTGCAACATGGACAAGAATCATTGGGAAAGCCCTGAGGAATGGAAGCCAGAGAGGTTTCTGGATGAGAAGTATGATCCAATGGATCTCCACAAAACCATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGTGCTCTTAAGGCAATGCTGATAGCTTGCACAACCATTGGAAGGATGGTTCAAGAGTTTGAGTGGAGGCTAAGGGACGGGGAAGAGGACAAAGTGGACACTCTCGGCCTCACGGCTCGCAAGCTCCAGCCTCTGCACGTAGTCGTAAAGCCAAGAATCAACTAA 1569 46.4 MAVVTDPLASMQLLANTLQAPPYAAAAVLGGVSLMLSVFLVADCRKKRRKFLPPVPGNYRLVVTLFSIMVELIDYSIPGVPLLGNLLQLKEKKPHMTFARWAETYGPVYSIRTGASTVIVLNTAEVAKEAMVTRYASISSRKLSKALTILTADKCMVAMSDYNDFHKMVKRYILANVLGANAQKKHRQRRDTMIENISRELFAHLKDFPSETVNFRKIFEAELFRLALKETLGKDVESIYVDGLGTTLPREVLFRVLVIDPMEGAIEVDWRDFFPYLRWIPNKSVENRIKNMDFRRRMTMKSLLEEQKKRIAAGEETNCYADFLLSEAKTLTEDQISMLLWETIIETSDTTLVDYLYQHILNVCGSAKLTEENLSQLPYLTAVFHETLRRHSPVPVVPLRYAHEDTQLGGYFVPAGSEIAVNIYACNMDKNHWESPEEWKPERFLDEKYDPMDLHKTMAFGGGKRVCAGALKAMLIACTTIGRMVQEFEWRLRDGEEDKVDTLGLTARKLQPLHVVVKPRIN 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31746588 31748846 + ClCG05G019490.1 Cla05g01997 273487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g01997 522 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 24 520 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Cla05g01997 522 SUPERFAMILY Cytochrome P450 78 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 PRINTS E-class P450 group I signature 126 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Cla05g01997 522 Pfam Cytochrome P450 79 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g01997 522 Gene3D Cytochrome P450 75 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01997 Cla-Chr5:31746588 Cla10g01561 Cla-Chr10:31014768 5.71E-52 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g01997 K04122 - csv:101209283 918.302