Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02006 ATGGCTTCCTCTGTCTCATCTTCAGTTAGCAAGGAATTCCCCCAAGTAGTTAATCAACAGGAGAAAATCACCGCACCCTATGGCTCATGGAAGTCTCCGATCACCGCTGACGTTGTGTCCGGCGCCTCCAAACGAATCGGAGGTGCTGCCGTTGATGGTTCTGGTCGCCTTATCTGGCTTGAATCACGGCCGTCTGAATCTGGGCGGGAAGTTCTTGTCAAGGAACCGATGAAGCTGGGCGATGAGATTATTGATATTACTCCAAAGGAGTTCTCAGTTCGGACCACTGCACATGAGTACGGTGGTGGTGCTTTCATGGTATCTGGGGACACTGTAGTCTTCTCTAATTTCGAGGACCAGAGATTATATAAGCAATCATTTGCGTCTTCTATGATGCCAGATTCTTCTCCCCGACCCCTTACTCCAGATTATGGTGGACCGTTAGTCAGTTATGCTGATGGAGTGTTTGATTTACGTCTCAATCGTTATATCGCTGTACGGGAAGATCGGCGCAATATTAGCTCAAGTCCAACCGCGACCATTGTATCTATAGGACTTGAAGGGAAAGCTATAGAAGATCCAGAGGTACTTCTTGAGGGAAGTGACTTTTATGCTTTTCCCCGAGTGGATGCTGAAGGGAAACGGATTGCATGGATCCAATGGCATCACCCTAACATGTCATGGGATAAATCAGAGCTTTGGGTTGGTTACTTCTCTGAGAATGGTGAAATCGAAAAGTGTGTCTGTGTTGCTGGTTGTGATCCGGACCTAGTGGAGTCACCTACTGAGCCTAAGTGGTCCTCTGAGGGAGAACTTTATTTTGTTACTGATAGGAAAAATGGGTTCTGGAATCTATACAAATGGTTTGAGGCAGATAATGAGGTGTCTCCAGTTTATTCTTTGAATGCGGAGTTTTCGCGACCATGTTGGGTTTTTGGCATAAACTCTTACGGTTTCTTACCTGGCAATCGAGGAGAAAACTATATACTTTGCAGCTATAGGCAGCATGGGAGGTCATATCTTGGTGTTCTGGGTGATGGACAAAGCTCTCCATCTCTTCTTGATATTCCCTTATCAGATATTGATAATATTACTATTGGGAACCATTGCTTTTATGTGGAGGGAGCGTCACCCTTTCATCCACCATCAATTGCTAAGGTTACTCTAGACGCTGAAAACTTGAAAGTAGTTGAATTCACTATTATCTGGTCGTCATCGCCTGATATTTTGACTTATAAGTCATACTTCAGCTCTCCAAAGTTAATTGAATTTGCAACAGAAGTGCCTGGTGAAAAGGCTTATGCCTATTTTTATCCACCATTCAATCCCATTTACTATTCTAGCGAGGACGAAAAGCCTCCATTGTTGTTGGAAAGCCATGGAGGTCCGACGGATGAATCACGTGGAATATTAAATCTAAGAGTTCAGTATTGGACTAGTCGAGGATGGGCATTTGTCAGTGTCAACTATGGAGGAAGCTCTGGTTATGGGAGGGACTATCGAGAAAGGCTTTTGAGGAATTGGGGCATTGTTGATGTCAATGACTGTTGCAGTTGTGCACGATATTTGGTCCATTCGGGAGTAGTTGATGCAGAAAGATTATGCATTTCTGGGGAATCTGCTGGAGGATACACTGTCCTAGCTGCTCTAGCTTTCAGAGATACATTCAAGGCAGGAGCTTCCTTGTATGGTATAGCTGACTTGCAGATGTTGCGTGCTGGAATGCACAAATTTGAATCTTATTATATTGATAATCTTGTTGGAGGTGAAAGAGAATATTATGAAAGGTCGCCAATTAATTTTGTTGAAAAATTTTCTTGTCCATTAATCTTGTTCCAGGGATTGGATGACAAAGTTGTGCCACCTACTCAAGCCCGTAAGATCTACGAAGCACTGAAAGAGAAGGGCCTCCCTGTTGCTTTAATTGAATTCGAAGGAGAACAACACGGCTTTCGCAAGGCCGAGAATATAAAATTTACGCTGGAACAACAAATGCTGTTCTTTGCAAGATTGGTCGGACGCTTTGAGCCGGGCAACAGGGTCGCTTCAATGAGTCTCTATGCTCTATTAGGACTTGTTCGCTTTTCTGCTCCATCGTCTTTTCTTATTTCCAATTTCAACTCCTTAAATAGAGCATTTATCAACCGAGTCTCCACTCGAACGCAGTTTCCAAGCTACACCACCATGGCTTCATCCATGTCTTCATCCATGTCTTCTTCGCCTAACACCAACAAAGACGTCTCAGAAGTAGCACAGCAGCTCCCCAAAATCACTGCGCCGTACGGCTCCTGGAAGTCGCCAATCACTGCTGACGTTGTTACTGGTGCCTCCAAGCGACTTGGTGGTACTGCTGTCGACGGTAATGGACACCTTATCTGGCTCGAATCCCGGCCTACCGAATCCGGGAGAGGAGTGCTTGTTAAGGAATCGGAAAATCCAGGGGATGAGCCTAGTGATATTACTCCAAAGGACTTTTCAGTGCGGAACACGACGCAGGAATACGGCGGTGGTGCGTTCACGGTGGCCGGAGACATCGTTGTCTTTTCGAATTACAAGGACCAAAGACTTTACAAGCAGTCTTTAAATTCAGATTCGCCTCCGGAAGCACTTACTCCCGATTACGGTGGACGATCAGTTAGTTATGCAGATGGGGTGTTCGATTCTCGTTTTAATCGTTTTATTACCGTCCAGGAAGATGGACGTCAAAGTAGCTTGAATCCAATCACCACAATTGTGTCAGTGGAACTTGACGGCAAGGTTATTAATGAACCGAAGGTCTTAGTTGGAGGAAATGATTTCTATGCCTTCCCACGATTGGATCCCAAAGGGGAACGGATTGCATGGATTGAATGGGGTCATCCTAACATGCCTTGGGATAAATCTGAGCTCTGGGTTGGGTACCTTTCTGAGAATGGAGAGGTCTATAAACGAGTCTGTGTTGCTGGTGGTGATCCGAAGCTTGTTGAATCTCCTACTGAACCGAAGTGGTCTGCTCAGGGAGAACTATTCTTTATTACAGATAGACAAAGTGGGTTTTGGAATCTCTATAAATGGTTTGAGGCTGGCAATGAGGTGGCTCCAATATATTCTTTAAACGCTGAATTTTCCCGACCCTTGTGGATTTTTGGCACAAACTCTTATGAATTCTCAAGGACCGGTATTGGGAAAAACATCATAGTCTGCAGCTACAGACAGCGTGGGCGATCATATCTTGGAGTTCTGGATGAGGCGCAAAGCTCACTATCCTTGCTTGATATCCCATTTACGGATATTGAAAATATTTTTGAGGCTGGCAATGAGGTGGCTCCAATATATTCTTTAAACGCTGAATTTTCCCGACCCTTGTGGATTTTTGGCACAAACTCTTATGAATTCTCAAGGACCGGTATTGGGAAAAACATCATAGTCTGCAGCTACAGACAGCGTGGGCGATCATATCTTGGAGTTCTGGATGAGGCGCAAAGCTCACTATCCTTGCTTGATATCCCATTTACGGATATTGAAAATATTGCTCTGGGAAGTCAATGTATATATGTGGAAGGATCATCAGCACTTCATCCATCATCTATTGCCAAGGTGACCCTGATTGAAAGAACCTTGGAAGTAGTAGGCTTCACTATTATCTGGTCATCTTCGCCGGATATTTTGAAATTTAAGTCGTACTTCAGTCTTCCTGAGTTTATTGAATTTCCATCTGAAGTTCCTGGCCGAAAGGCTTATGCTTACTTTTATCCACCGTCCAATCCTATATATCAGGCTAGTCAGGATGAAAAGCCCCCACTGTTGTTGAAAAGCCATGGAGGTCCAACTGCTGAAACACGTGGAAATTTAAATCCTAGCATTCAATATTGGACTAGTCGAGGCTGGGGTTACGTTGATGTCAATTATGGTGGTAGCACTGGTTATGGGAGAGAGTACCGAGAAAGGCTTTTGGGGCAGTGGGGAATTGTTGATGTGGACTCTGGAAAGGTTGATGGAGAACGATTGTGCATCACAGGGGGCTCTGCTGGGGGATATACCACCTTAGCTGCTCTTGCTTTTAAAGATATATTTAAGGCAGGAGCTTCCTTGTATGGGATAGCTGACTTACGCTTGTTGAGAGCAGATACGCACAAGTTTGAATCTCATTATATTGACAATCTTGTTGGGAATGAAGAAGATTACTTCGAGAGGTCACCAATCAATTTTGTTGACAAATTTTCTTGCCCTATAATCCTATTCCAGGGATTGGAGGACAAAGTCGTACTACCTAATCAAGCTCGTAAGATATATCATGCATTGAAGGATAAGGGCTTGCCAGTTGCTTTGGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCAGAAAATATCAAATTTACACTGGAACAACAAATGATGTTCTTTGCACGATTAGTAGGACGCTTCCAAGTTGCAGACGGGCTAGAGAAGAAAATTCAATACTTGTTTTGTATTACGGGGAATGGTTACAGAACTGTTAAGCATTTGAGCGATCTGAAGATGGACAATATTGACAGAGAAGCAATTCCAATTCAGACCAAGCTAGAATTGCCGGTATGTTACTCGAATGAAGGAAGATGA 4584 44.0 MASSVSSSVSKEFPQVVNQQEKITAPYGSWKSPITADVVSGASKRIGGAAVDGSGRLIWLESRPSESGREVLVKEPMKLGDEIIDITPKEFSVRTTAHEYGGGAFMVSGDTVVFSNFEDQRLYKQSFASSMMPDSSPRPLTPDYGGPLVSYADGVFDLRLNRYIAVREDRRNISSSPTATIVSIGLEGKAIEDPEVLLEGSDFYAFPRVDAEGKRIAWIQWHHPNMSWDKSELWVGYFSENGEIEKCVCVAGCDPDLVESPTEPKWSSEGELYFVTDRKNGFWNLYKWFEADNEVSPVYSLNAEFSRPCWVFGINSYGFLPGNRGENYILCSYRQHGRSYLGVLGDGQSSPSLLDIPLSDIDNITIGNHCFYVEGASPFHPPSIAKVTLDAENLKVVEFTIIWSSSPDILTYKSYFSSPKLIEFATEVPGEKAYAYFYPPFNPIYYSSEDEKPPLLLESHGGPTDESRGILNLRVQYWTSRGWAFVSVNYGGSSGYGRDYRERLLRNWGIVDVNDCCSCARYLVHSGVVDAERLCISGESAGGYTVLAALAFRDTFKAGASLYGIADLQMLRAGMHKFESYYIDNLVGGEREYYERSPINFVEKFSCPLILFQGLDDKVVPPTQARKIYEALKEKGLPVALIEFEGEQHGFRKAENIKFTLEQQMLFFARLVGRFEPGNRVASMSLYALLGLVRFSAPSSFLISNFNSLNRAFINRVSTRTQFPSYTTMASSMSSSMSSSPNTNKDVSEVAQQLPKITAPYGSWKSPITADVVTGASKRLGGTAVDGNGHLIWLESRPTESGRGVLVKESENPGDEPSDITPKDFSVRNTTQEYGGGAFTVAGDIVVFSNYKDQRLYKQSLNSDSPPEALTPDYGGRSVSYADGVFDSRFNRFITVQEDGRQSSLNPITTIVSVELDGKVINEPKVLVGGNDFYAFPRLDPKGERIAWIEWGHPNMPWDKSELWVGYLSENGEVYKRVCVAGGDPKLVESPTEPKWSAQGELFFITDRQSGFWNLYKWFEAGNEVAPIYSLNAEFSRPLWIFGTNSYEFSRTGIGKNIIVCSYRQRGRSYLGVLDEAQSSLSLLDIPFTDIENIFEAGNEVAPIYSLNAEFSRPLWIFGTNSYEFSRTGIGKNIIVCSYRQRGRSYLGVLDEAQSSLSLLDIPFTDIENIALGSQCIYVEGSSALHPSSIAKVTLIERTLEVVGFTIIWSSSPDILKFKSYFSLPEFIEFPSEVPGRKAYAYFYPPSNPIYQASQDEKPPLLLKSHGGPTAETRGNLNPSIQYWTSRGWGYVDVNYGGSTGYGREYRERLLGQWGIVDVDSGKVDGERLCITGGSAGGYTTLAALAFKDIFKAGASLYGIADLRLLRADTHKFESHYIDNLVGNEEDYFERSPINFVDKFSCPIILFQGLEDKVVLPNQARKIYHALKDKGLPVALVEYEGEQHGFRKAENIKFTLEQQMMFFARLVGRFQVADGLEKKIQYLFCITGNGYRTVKHLSDLKMDNIDREAIPIQTKLELPVCYSNEGR 1527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31849056 31872034 + ClCG05G019590.1 Cla05g02006 273496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02006 1527 SUPERFAMILY DPP6 N-terminal domain-like 836 1064 - -
Cla05g02006 1527 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 755 1094 - -
Cla05g02006 1527 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 18 681 - -
Cla05g02006 1527 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 1096 1476 - -
Cla05g02006 1527 Pfam Prolyl oligopeptidase family 1280 1467 IPR001375 GO:0006508|GO:0008236
Cla05g02006 1527 Pfam Prolyl oligopeptidase family 473 672 IPR001375 GO:0006508|GO:0008236
Cla05g02006 1527 SUPERFAMILY alpha/beta-Hydrolases 428 671 IPR029058 -
Cla05g02006 1527 MobiDBLite consensus disorder prediction 802 826 - -
Cla05g02006 1527 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 18 681 - -
Cla05g02006 1527 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 1096 1476 - -
Cla05g02006 1527 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 755 1094 - -
Cla05g02006 1527 SUPERFAMILY DPP6 N-terminal domain-like 99 326 - -
Cla05g02006 1527 Gene3D alpha/beta hydrolase 411 676 IPR029058 -
Cla05g02006 1527 Gene3D alpha/beta hydrolase 1218 1473 IPR029058 -
Cla05g02006 1527 SUPERFAMILY alpha/beta-Hydrolases 1225 1466 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00044 Cla-Chr1:326959 Cla05g02006 Cla-Chr5:31849056 2.73E-11 dispersed
Cla01g01910 Cla-Chr1:33819012 Cla05g02006 Cla-Chr5:31849056 4.59E-06 dispersed
Cla05g02006 Cla-Chr5:31849056 Cla06g00623 Cla-Chr6:7610775 9.97E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02006 - - csv:101221995 1204.12