Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02022 ATGCTCCGTGCTTGGGCAAGAAGTCGGCGTTCTCATCGTTTAATTCATCTTCGTCGTTTCTCATCGTCGTCTTCATCTTCTTCCTCATCTTCTACTGCACAAAAATCAACCGAGGGATCGAACAATCTCCAGAATTCGCATTTAGTCTCACCCCCGACTCCGATTTTGCACCGCCCACAGAACAGTTTGTTGCCCAGTGCATCGCCCGCTTCTTTTTCTCGCAGTTCGATTATAACTGCCTCCGCTGCTGTTGTTTCTGCTTTAGTCGCTTCTATTGCTCTTCTTACCTCTGACAGTCGGTCTGATCACCCCGGGGAGAGTTATAATCCCTTGTATGATGGGATTGAAGGGGCGGCTCAGAGATCTAGCGATTCATTTAAGAAGATTTTTCATCACATTAAACAAACTGGCGTGGCCGCCTCGGTTCTCTGGCAGTCGTTAAGGTCGGTGATGTCGTCGGCCAATCATGAGGTCCGGTCCGGTTTTGAACTCAGGGTAGCGGCATTGCTGGCCGATATTGCTGCAGCCAATGCCAGCCGCAGGGCAGCGATTGTCGGGGCCGGAGACGGTGCTGTGGTGGACTGGTTGCTCGAGTCGGTGGCGGTTCCTCGGGATGGATGTGGAACTCAGGCAGAGTCCGCCAGAGCGCTGGCCTACTTGATTGCTGATCCTGACGTCTCTGCTTCCGTCCTTGGGAGGCCTCGTGCTGTGCCAAATCTTTTGAGATTCATCTTCTCGTGTCAGCCTCGGCGAACGAAGCAGAATGTAAAATATTGTTCTCAGGATTTTGTTGATATTTCCCCCCTTAAGTCTTGTTTTCCCATTGATTTTTGTCACATTTTTGTGGGACAGCATCCAAGACGTAGTTCATTCGATATTTCTGATTCTTTGAAAGGTAGGAGCATGCTTGTGGCTGCCATCATGGATATTGTAACGTCCAATTGTGATAGGTTAGAGAAGCTGGCTTTTGAGCCATCATTGCCTGCACATGCCGAAACTAGAGATATTGCAGCAGCTATTCAAGTTATTGAGGAAGGTGGTTTGGAATTTGATGAACCAAATGGCGGTGAAGATGAAGATGGTGGAAGAGGACTCAAAGGAATAGGAATTAAGATTCTTGGAGGCACTACTGTTTTGGGACTTTCGAGAATAAGTGGGTTTGTGAAGTTGGCGTATTCTGATGCTGGTCATGTAGAACTGGTAAAAAATACACCTAAAAGTTCAGTATCAGAAAAGCATGATAGCTCACTCGTAGCTAATTCTTCTGTTGTTCCTGGTCTGTGGGATGATTTGCATTGTGAGCATGTTGCTGTACCTTTTGCCGCTTGGGCGTTGGCAAATTGGTCAATGGCATCAGAACTGAATAGATTGCACATCCATGAACTAGATCAAGATGGACATGCTGTTATGACTGCTTTAATGGCACCTGAAAGGTCAGTGAAATGGCATGGAAGTTTGGTAGCTAGGCTTTTACTAGAGGACCGTAATCTCCCCTTAAATGATTATGTTTCTGATTGGAGCTCAAGCCTTCTTTCTACTGTTTCTCATGCAAGTAAAAATGATGACATCCCTTTGGCTCAGGCTGCTTTGTCTGCTTTTTTGGCTTCTGTTGAACGGTTCCCTGAGGCACAAAAGAAAATAATGGAGAGGGGTCTGCATCTAATGAGAGATGCTGCTATACGGACCCAAAAACATGGAGAGGTTCAAGAAGCATTAGCAAAGGCATTAGAGTTACTCAGCACTGGATGGATGCATCTATCAGCTGAAGAGAGTCAGAGATGGTCTGCTATACTACTTCAATGGGTCTTTGGCAAATTTTCCTCTGAATCTTTGAGGTCTTCTGCAACTAAAATTTTATCTTGCATTCTTGAAGACTACGGACCAAGCTCCATACCTATTTCTCAAGGATGGCTGGCTATACTGCTGACTGAAATACTAGGTTCTACTAAGAAGCCTGCAGTGAATGGAGCTATGCAGCTTAAAAATGACAAAGTGAAGACTAAGATTGAGCAGTCGAACATTGTTTTTGCCAGTCAAGTTGCTAGTCAGTTAGCAGGTGCTGTTGTTAACCTGGCGGTACACCAGTTTGGTGCAACTACTGATTCATTAGATACCTCTCCGTTGGCAGATTTACTTTCATGTGAACCTTTTGTAGCACCTTTAAAGAATATAAAAAAAGAGAATAGTCCAAAGTTTGATGCAGCTGATTCTGCAATGGCAACGTTAAAGGGGATTAAAGCACTGACTGAAGTTTGTGCAGATGATTCTTCATGTCAGAGCAGAATAGCTGATTTTGGCATTCTCTTTTTGCTGAGACGCCTTTTGTTATGCGATGATTATGAGAAGCTGGCAGCCATGGAAGCATATGATGCATCTAGAGCTCTTGAGGCTCAGGAACGTGTTTCAAATGCATCTGGGGAACCATCACTTTCAGAGAAGAAGAATGACTCATCTAGTGTCCGAGTACCCCCCACGGCTCACATCCGTAGGCATGCTGCTCGGCTTTTAACCATCCTCTCACTTCTAGAGAAAGTCCAGAAGGAGATTCTCTCTGATGAAGAATTTTGTAGATGGCTCGAGGACTGTGCCAATGGGGCCATTCCTGGTTGCCATGATGCTAAATTGCAAAGTTATGCTAGAGCCACACTGTTAAATATATTTTGTATTAACCATAGAGCTTCTGAAAATGCTTCTACCTCTGATACTGAGTCTACAAACAGGAAGAAGAATTGCCCCCGTTATGATGATATGATTTTTTTAATAAATCCCGAACTTCCTCACTGGAAGGTTCATGAAGAAAAGGTGCAGGACACTGTTCAAAAGGATGAATCTTCTCTTTCACAGGCTAATTTCATTGATATTGATGGTGTAGCTGTGGCAAGGCATGGAAATGATGATAATTCTTCATCTCATGAGAATGATTCTAGGCAAGACTCTCCCTTGGTAGATGTGGTTTTCATTCATGGCCTCCGAGGTGGACCTTACAAGTCCTGGCGCATATCTGAGGACAAATCCTCAACAAAATCTGGACTGGTAGAGAAGATTGATCAGGAGGCAGGGAAACTAGGGACGTTTTGGCCGGGTGAATGGCTTTCATCCGACTTCCCAAGGGCTCGTATGTTTACCCTTAAATACAAGACAAATCTCACTCAGTGGTCTGGGGCTAGCCTTCCTCTTCAGGAAGTCAGCTCCATGCTACTGGATAAGCTTGTTGCTGCTGGAATTGGGGATCGACCTGTTGTATTTGTTACTCACAGCATGGGAGGGCTAGTTGTCAAGCAAATGTTGTATAAAGCCCAGACAGAAAATATTGATAAACTTGTGAAGAATACTGTGGGAGTTGTCTTCTATAGCTGCCCACATTTTGGAAGCAAACTAGCAGACATGCCTTGGCGAATGGGTCTTGTATTCCGCCCTGCCCCTACTATAGGAGAGCTGAGGAGTGGGTCTCCTAGATTGGTGGAGCTGAATGATTTTCTCCGTCACCTCCATAAGAAAGGACTACTTGAGACGAAGGTGACCCCAATTGTTGAAGGTTATGGAGGATGGGCTTTCCGAGTGGAAATTGTTCCTATTGAATCTGCATATCCTGGCTTTGGCGAACTAGTTGTTTTAGAATCAACGGATCACATAAATTCGTGTAAGCCCCTCAGCCGCACTGACCCTTCATACACCGAGACATTGGAATTTTTGCAGAAGTTGAAATCTCGCTATGCTTAG 3720 44.97 MLRAWARSRRSHRLIHLRRFSSSSSSSSSSSTAQKSTEGSNNLQNSHLVSPPTPILHRPQNSLLPSASPASFSRSSIITASAAVVSALVASIALLTSDSRSDHPGESYNPLYDGIEGAAQRSSDSFKKIFHHIKQTGVAASVLWQSLRSVMSSANHEVRSGFELRVAALLADIAAANASRRAAIVGAGDGAVVDWLLESVAVPRDGCGTQAESARALAYLIADPDVSASVLGRPRAVPNLLRFIFSCQPRRTKQNVKYCSQDFVDISPLKSCFPIDFCHIFVGQHPRRSSFDISDSLKGRSMLVAAIMDIVTSNCDRLEKLAFEPSLPAHAETRDIAAAIQVIEEGGLEFDEPNGGEDEDGGRGLKGIGIKILGGTTVLGLSRISGFVKLAYSDAGHVELVKNTPKSSVSEKHDSSLVANSSVVPGLWDDLHCEHVAVPFAAWALANWSMASELNRLHIHELDQDGHAVMTALMAPERSVKWHGSLVARLLLEDRNLPLNDYVSDWSSSLLSTVSHASKNDDIPLAQAALSAFLASVERFPEAQKKIMERGLHLMRDAAIRTQKHGEVQEALAKALELLSTGWMHLSAEESQRWSAILLQWVFGKFSSESLRSSATKILSCILEDYGPSSIPISQGWLAILLTEILGSTKKPAVNGAMQLKNDKVKTKIEQSNIVFASQVASQLAGAVVNLAVHQFGATTDSLDTSPLADLLSCEPFVAPLKNIKKENSPKFDAADSAMATLKGIKALTEVCADDSSCQSRIADFGILFLLRRLLLCDDYEKLAAMEAYDASRALEAQERVSNASGEPSLSEKKNDSSSVRVPPTAHIRRHAARLLTILSLLEKVQKEILSDEEFCRWLEDCANGAIPGCHDAKLQSYARATLLNIFCINHRASENASTSDTESTNRKKNCPRYDDMIFLINPELPHWKVHEEKVQDTVQKDESSLSQANFIDIDGVAVARHGNDDNSSSHENDSRQDSPLVDVVFIHGLRGGPYKSWRISEDKSSTKSGLVEKIDQEAGKLGTFWPGEWLSSDFPRARMFTLKYKTNLTQWSGASLPLQEVSSMLLDKLVAAGIGDRPVVFVTHSMGGLVVKQMLYKAQTENIDKLVKNTVGVVFYSCPHFGSKLADMPWRMGLVFRPAPTIGELRSGSPRLVELNDFLRHLHKKGLLETKVTPIVEGYGGWAFRVEIVPIESAYPGFGELVVLESTDHINSCKPLSRTDPSYTETLEFLQKLKSRYA 1239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31969351 31981662 - ClCG05G019730.2 Cla05g02022 273512

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02022 1239 MobiDBLite consensus disorder prediction 17 62 - -
Cla05g02022 1239 SUPERFAMILY alpha/beta-Hydrolases 979 1234 IPR029058 -
Cla05g02022 1239 Gene3D alpha/beta hydrolase 983 1168 IPR029058 -
Cla05g02022 1239 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 267 - -
Cla05g02022 1239 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 284 1237 - -
Cla05g02022 1239 MobiDBLite consensus disorder prediction 800 822 - -
Cla05g02022 1239 MobiDBLite consensus disorder prediction 18 62 - -
Cla05g02022 1239 MobiDBLite consensus disorder prediction 800 823 - -
Cla05g02022 1239 SUPERFAMILY ARM repeat 439 886 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02022 K23504 SERAC1; protein SERAC1 - csv:101222471 2036.54
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g809 . Blo12g00948 . Bda03g00222 . Bpe04g00189 Bma04g00176 . . . . Cma09g00214 . . . Cpe06g00149 . . . . . . . . . . . . . . . . . . Cone20ag0175 Lsi04g01580 Csa04g02389 . . . . . . . . . . . . Cmo09g00207 . . . Car09g00182 . . Bhi09g03347 . . . . . . Cla05g02022 Cam05g2172 Cec05g2188 Cco05g2236 Clacu05g2165 Cmu05g2033 Cre05g2161 . . Chy07g00115 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005432 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5 2 1 39