Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02084 ATGGAACCTCATACAATTCCTTGGCTCTCTCGTTTTCTCATCTCATTCTCTCTTTTCTTCACGCTCATTCTTCTTTCCAAGCTCAGAAAAGTAAACCACAGGAAACTTCCACCAAGCCCACCTTCCCTTCCGGTCATCGGTCACCTTCATCTCCTCAAAGACCCTTTCCACCGAGTGCTGCACCATCTCTCCAACGAATACGGTCCAATTCTATCCCTTTCAATCGGCTCCCGTCCGGTGGTGGTTGTCTCCTCCCCCACCGTTGTCCGTGAGTGCTTCACCAAAAACGACATCGTATTCGCCAATCGCCCTCGCTTACTTTCAGGGAAGTACATCAATTACAACTACACCGCAGTGGGATTCGCCCCCTATGGCCAGCACTGGCGCAACATGCGCCGCATAGCCACGACTGAGCTACTCTCCAACCACCGCCTCAACACGTATCTCAACACTCGAGTGGAAGAACTAAAGTTTTGGGAACTATCTTTCAACGTGGTGATGAGGATGATTAGTGGGAAACGGTATTTTGGTGTGGAAGTGGAGAATGTGGAGGAAGCCTTGGAGTTTAGGGAGATTATGAAGGAGCTTCTTGAATTGAGTGGGGTGACGAATGCAGCGGATTTTTTGCCCATTTTGAGAGTGTTTGATTTTCAAGGACTTGAGAAGAGGATGTTGAAAGCGAGTGGGCGAGCTGATGTTTTCCTACAAAAACTCATTGATGAACACAGGGAAAGGAGAGTTTCACGTTGGCCGGAGGACAAACATGGAAAAACCATGATTCAAACTCTGCTCTCCTTGCAAGAATCTCAACCCCATTATTACTCCGATGATATAATCAAGGGTCATCTTCTGACGATGTTGGCTGCGGGTACTGATACAACTTCAGGAACAATAGAATGGGCGATGTCGCTACTTTTGAATCATCCAACGGTGATGAAGAAAGCTTGGATTGAGATAAGAGAAAGGGTTGGGGAGAATCGGATGGTGGAGGAAGGCGATGTAAGTAACCTCAAATATGTGGAAGCCATAATCTACGAGACTCTTCGACTGTTTCCAGCAGCTCCACTGTTGGTCCCACATGAATGTTCTGAAGATTGTAGAATTGAAGGATTTGAGGTAGCCAAAGGAACAATGTTGTTGGTGAATGCATGGGCCATTCATAGGGACTCCAAAGTGTGGGAACATCCCACCAGCTTCCAACCAGAGAGGTTTCTAAATTGGGAAGGCGTTGAATCCTACAAGTGGATACCTTTTGGAATGGGGAGGAGGGCTTGCCCAGGGGCTGCCCTTGCCCAACGAGTCGTGGGATTAACATTGGCCACTTTGATTCAGTGCTTTGAGTGGGACAAGGTTGATGAGCAACAAATAGACTTGTCTGAAGGAAGTGGAATAACTATGCCTAAAGCCAAAGCTTTGGAGGCAATGTGTAAACCTCGTACCTCCATGCTTCATTTACTGGCTCATCTTTGA 1470 47.21 MEPHTIPWLSRFLISFSLFFTLILLSKLRKVNHRKLPPSPPSLPVIGHLHLLKDPFHRVLHHLSNEYGPILSLSIGSRPVVVVSSPTVVRECFTKNDIVFANRPRLLSGKYINYNYTAVGFAPYGQHWRNMRRIATTELLSNHRLNTYLNTRVEELKFWELSFNVVMRMISGKRYFGVEVENVEEALEFREIMKELLELSGVTNAADFLPILRVFDFQGLEKRMLKASGRADVFLQKLIDEHRERRVSRWPEDKHGKTMIQTLLSLQESQPHYYSDDIIKGHLLTMLAAGTDTTSGTIEWAMSLLLNHPTVMKKAWIEIRERVGENRMVEEGDVSNLKYVEAIIYETLRLFPAAPLLVPHECSEDCRIEGFEVAKGTMLLVNAWAIHRDSKVWEHPTSFQPERFLNWEGVESYKWIPFGMGRRACPGAALAQRVVGLTLATLIQCFEWDKVDEQQIDLSEGSGITMPKAKALEAMCKPRTSMLHLLAHL 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32494952 32497069 - ClCG05G020310.2 Cla05g02084 273574

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02084 489 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 13 482 - -
Cla05g02084 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Cla05g02084 489 Gene3D Cytochrome P450 23 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 482 - -
Cla05g02084 489 SUPERFAMILY Cytochrome P450 37 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 Pfam Cytochrome P450 37 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02084 489 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02084 K13260 CYP81E; isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] - csv:101207002 816.609
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02084 Cla-Chr5:32494952 Cla01g01676 Cla-Chr1:31686953 1.21E-162 dispersed
Cla05g02084 Cla-Chr5:32494952 Cla05g02088 Cla-Chr5:32512220 9.01E-165 proximal
Cla01g01675 Cla-Chr1:31678165 Cla05g02084 Cla-Chr5:32494952 1.20E-166 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g697 Blo01g01506 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Car09g00223 . . Bhi09g03264 . . . . . . Cla05g02084 . . . . . . . . Chy07g00168 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477