Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02089 ATGGAGGTTTTGGGATCTATATTTCTATACATTCCACTATTTGTAATGTTGTATATGTTAACAGGGCAGCTTCTTCACAAGATTAGAAACCTTCCGCCCACACCTTTCCCTTCACTTCCAATCATCGGCCATCTCCATCTCTTGAAGAAACCCATCTACCGGACTTTGGCGGATATCTCAAATCGCTACGGTCCAGTTGTGTTTCTCCGGTTCGGGTCACGCAAAGTTCTCGTGGTGTCGTCTCCTTCCGCGGTCGAAGAATGTCTGACCAAAAACGACGTCATCTTTGCAAATCGCCCTCGTCTCATTATAACCAAGTGGTTCGGATACAACAACACGAATCTCGTATGGTCTTCCTATGGGGACCACTGGCGCAATCTCCGCCGAATCTCCACCGTTGAAGTCTTGTCCACCCATCGCCTTCAAATGCTCTCAACCGTCCGTCTCGAAGAAGTCAAGTCTTTGATTCGGAAGCTCGCGAATGGCGAAAACCAAGTACATAACATGAAGAATGCGTTTTTTGATCTAACTTATAACGTGATGTTGAGGATGCTCGTCGGAAAGCGGTTTTACGGTGAGGATGTGGAAGATGCTGACGAGGCAAAAAGATTTAGAGAGCTACAAGCCGAGTCAACTCAATTGGGTGGTAAATCAAATTTACGAGATTTTATCCCACTCGTATCTTGGCTGGGATTTGGGTCGACTACAGAGAATAAGATAATGAAATGTCACAAGGGAAGAGACGCTTTCATCCAGAATTTGATTGACCAATATAAAAAAAGAGTTGTTGATCAAACTGAAACGGCCAACAATTCATGTGGTGATGGGAGGAAGAAGACGATGATTGAAGTATTATTGGAACTACAAGAGTACGAACCTGAGCAGTATAATGATGAAACTATCAAAGCTCTGTTGTTGGTTTTGTTGGCTGCAGGTACGGAAACAACAGTGACCACAATGGAATGGGCTCTATCTCTTATGTTGAACCATCTCGAAGTTTTAAAGAAATTTCAAATTGAAATTGACAATAAAGTTGGACACGATCGTTTGATTGACGAATCTGACGTGGCTAACCTTCGTAGCCTACGTGGCATCATCAATGAAACCTTACGAATGTACCCTCCAGCTCCATTAATGATACCTCATGAATCATCAAAAGATTGTACTGTTGGAGGGTATCATATCCCACGTGGCACTATGTTGCAGGTGAATTTATGGGCCATTCATAACGACCCTACGATTTGGGCTCACCCAAAAAAGTTTGATCCATGTAGGTTTGAGAGGCTGGGAAGTGAAAAGTACGGGTTCAATCTGATGCCATTCGGGTCGGGTAGAAGAGGGTGTCCAGGAGAGGGATTGGGCCTTCGAGTGATTGGGCTAGTATTGGGCTCGTTGATCCAATGTTTTGAATGGGAACGTCCTAGTGAAGAATTGGTGGATATGAGAGAAGGAAATTCAATCTCTATGTCTAAGGCCCAATACCTGCAAGCTAAATGTTTTAAATTGTCAGTTTTAGCATTTGCTTCCTTTTTAAAAGAAGCAATCATCTTGATAGACGAACAGCCACTGAATCCCATGGCTATGGGAGCTATCTTTCTTTACATTCCACTGTTTCTTGTGTTGTACATATTAACGGACCACTTCCTTCACAACATCAGAAACCTCCCCCCCACCCCTTTTCCATCACTACCCATCCTTGGCCATCTCCACCTTTTGAACAAACCCATATACCGCACTCTATACAACATCTCCAACCGCTATGGTCCGGTCGTGTTCCTTCGATTGGGGTCTCGCTCCGTTTTGATCGTGTCGTCTCCTTCTTTAGCCGAAGAATGTTTGACTAAAAACGATATCGTGTTTGCAAATCGACCTCGTCTCCTCATATCCAAGTGCTTTGGATACAACAGTACGAATATGATTTGGTCATCTTATGGGAACCATTGGCGCAACCTCCGCCGAATCTGTACGGTTGAAATTTTGTCCACTCATCGCCTTCACATGCTTTCTATTATTCGTTTTGAAGAGGTTTGGTCTTTAATTCAACTGCTCATGAAATGTGAAAACCAAATAGTTAACATGAAACATGCTTTTTTCGATCTAACTTTCAATTTAATGTTGAGGATGATCGTTGGAAAACGTTTCTATGGCGACGATGTAGACGATGTCGATGAGGCAAAATTATTTAGGGAGTTACAAGCCGAGTCAATTCGGTTGTCTGGTAAATCATATATAGGGGATTTTATTCCATTAATGGCATGGTTGGGGTTTGGTTCAACTTTGGAGAAAGAGATGATGGATTGTCAAAATAGAAGAGATGCTTTGATGCAAAGTTTAATTGAGCAACATCGTGAAAGAAGAACGACAAAACTCGATGATTCGTTTCGTGATGGAAGGAAGAAGACAATGATTGAAGTATTGTTAGATTTGCAAGAATCCGAACCTGAACAATATACCGATGAAACTATCAGAGCGTTGATTTTACTTATGTTCGTAGCAGGCACAGAAACATCAGGGAGCATAATGGAATGGGCTCTATCTCTTTTGTTAAACCATCCACAAATTTTAAAGAAAGCACAAACTGAGATTGATAATCAAGTTGGCCACCAACGTCTGATTGACGAATCCGACATGGCCCACCTTCCTTACCTACGTGGCATCATCAACGAGACCCTTCGAATGTATCCTCCAGCTCCATTGCTGGCACCTCACGAATCATCAGAGGACTGCTTTGTTGGAGGTTACCATATTCCACGTGGCACTATGTTATACATCAATATATGGGCCATTCAGAACCACCCCGGAATTTGGGCCCACCCAAGAAAATTTGACCCCGACAGATTTAACCAGTTGGACACTGAAAATTACAAGTTCAATTTGATGCCATTTGGGTTGGGGAGGAGGGGATGTCCAGGAGAGGGTCTGGGCCTACGAATGATTGGACTTGTATTGGGCTCATTGATTCAATGCTTTGACTGGGAGCGTCCTAGTGACGAATTAGTGGACATGACTGAAGGGATTGCTGTCACCATGCCTAAAGCCCAACATTTACATGCTAAATGTAGGCCCAGGCCCATAATTGTTAATCTTCTCTCACAAACCAAGTAA 3105 43.03 MEVLGSIFLYIPLFVMLYMLTGQLLHKIRNLPPTPFPSLPIIGHLHLLKKPIYRTLADISNRYGPVVFLRFGSRKVLVVSSPSAVEECLTKNDVIFANRPRLIITKWFGYNNTNLVWSSYGDHWRNLRRISTVEVLSTHRLQMLSTVRLEEVKSLIRKLANGENQVHNMKNAFFDLTYNVMLRMLVGKRFYGEDVEDADEAKRFRELQAESTQLGGKSNLRDFIPLVSWLGFGSTTENKIMKCHKGRDAFIQNLIDQYKKRVVDQTETANNSCGDGRKKTMIEVLLELQEYEPEQYNDETIKALLLVLLAAGTETTVTTMEWALSLMLNHLEVLKKFQIEIDNKVGHDRLIDESDVANLRSLRGIINETLRMYPPAPLMIPHESSKDCTVGGYHIPRGTMLQVNLWAIHNDPTIWAHPKKFDPCRFERLGSEKYGFNLMPFGSGRRGCPGEGLGLRVIGLVLGSLIQCFEWERPSEELVDMREGNSISMSKAQYLQAKCFKLSVLAFASFLKEAIILIDEQPLNPMAMGAIFLYIPLFLVLYILTDHFLHNIRNLPPTPFPSLPILGHLHLLNKPIYRTLYNISNRYGPVVFLRLGSRSVLIVSSPSLAEECLTKNDIVFANRPRLLISKCFGYNSTNMIWSSYGNHWRNLRRICTVEILSTHRLHMLSIIRFEEVWSLIQLLMKCENQIVNMKHAFFDLTFNLMLRMIVGKRFYGDDVDDVDEAKLFRELQAESIRLSGKSYIGDFIPLMAWLGFGSTLEKEMMDCQNRRDALMQSLIEQHRERRTTKLDDSFRDGRKKTMIEVLLDLQESEPEQYTDETIRALILLMFVAGTETSGSIMEWALSLLLNHPQILKKAQTEIDNQVGHQRLIDESDMAHLPYLRGIINETLRMYPPAPLLAPHESSEDCFVGGYHIPRGTMLYINIWAIQNHPGIWAHPRKFDPDRFNQLDTENYKFNLMPFGLGRRGCPGEGLGLRMIGLVLGSLIQCFDWERPSDELVDMTEGIAVTMPKAQHLHAKCRPRPIIVNLLSQTK 1034
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32519023 32526319 + ClCG05G020360.2 Cla05g02089 273579

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02089 1034 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 SUPERFAMILY Cytochrome P450 556 1023 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 Gene3D Cytochrome P450 550 1026 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 962 971 IPR017972 GO:0005506|GO:0016705
Cla05g02089 1034 SUPERFAMILY Cytochrome P450 32 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 Pfam Cytochrome P450 33 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 Pfam Cytochrome P450 557 1013 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PANTHER CYTOCHROME P450 81E8 538 1032 - -
Cla05g02089 1034 PANTHER CYTOCHROME P450 81E8 14 501 - -
Cla05g02089 1034 PRINTS E-class P450 group I signature 584 603 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 608 629 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 700 718 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 821 838 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 841 867 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 884 902 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 925 949 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 959 969 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 PRINTS E-class P450 group I signature 969 992 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02089 1034 Coils Coil 152 172 - -
Cla05g02089 1034 PANTHER CYTOCHROME P450 82C3-RELATED 14 501 - -
Cla05g02089 1034 PANTHER CYTOCHROME P450 82C3-RELATED 538 1032 - -
Cla05g02089 1034 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02089 - - - bhj:120084943 945.651
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02089 Cla-Chr5:32519023 Cla11g01516 Cla-Chr11:28807477 0 dispersed
Cla11g01115 Cla-Chr11:22623108 Cla05g02089 Cla-Chr5:32519023 2.67E-14 dispersed
Cla05g02088 Cla-Chr5:32512220 Cla05g02089 Cla-Chr5:32519023 0 tandem
Cla05g02089 Cla-Chr5:32519023 Cla05g02090 Cla-Chr5:32530433 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g685 . . . . . . . . . . Cma01g01801 . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01505 Csa04g02460 . . . . . . . . . . . . . . . . . . . Bhi09g03251 . . . . . . Cla05g02089 . . . . . . . Csa02g01911 Chy07g00174 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477