Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02115 ATGAAACTTTCAGGGTGTGGTGGGCATACACCACAATGCAGCATACTCTTTAAGGGATGGATAGTAGCACTCACCATGCCCACCGCCGTCTTCCGCGTCTCTGTTCTGTTCGTCTCTGTTTTTCAAATCATCTCCGCCGCCGGGTCGTCGCGCTGGACGGTGGAGTATCTGCCGGGATTTGCAGGCCGTCTCCCATTCGAACTGGAAACAGGATATGTGGGTGTTGGGGATTTGGAGGAAGTGCAATTGTTTTATTATTTTGTGAAATCGGAAGGAAATCCAAAGACGGATCCTCTGCTTTTTTGGCTCACCGGAGGCCCCGGTTGCTCTGCTTTAACTGCACTTGCCTTTGAAGTTGGTCCCATAAATTTTAAGATTGAGCGATACAATGGGAGCTTACCTAAAATAATCTTGAACCCTTATTCGTGGACGAAGAAATCCAGTATAATAATGGTAGATTTGCCGGTGGGAACAGGGTTTTCATATGGTAAAACTCCACAATCTCTTAAGACTGGAGATTTTAATCAAGTTCATCATTCTATTCAATTTTTTAAAAAGTGGTTGACTAATCATCCAGAATTTATATCTAATCCATTTTATGTGGGTGGAGATTCATACTCGGGTATTATCATTCCGGTTATTGCTCAAGAAATTTTGGAAGAAAATAAGTATGCTCCCTATGTAAATCTTCAGGGATACATATTGGGAAATCCAGTCACCATTCGCGACACGTATCAAAATTTTGCAATTCCTTTTGCTCATAAAATGACTCTTATCTCTGATGAGTTATTTGAGTCATTGACCTCTAGTTGCAAGGGAGAATATATAAATATTGATCCGAGCAATGTGGATTGTTTAAGACATTATAATACGTACCAAAAGTGTGTTTCAAAGATAGAAAAGTCAAGTATTTTGTTGCCAAAATGTTCGTTTCATTCTCCAAAGAAACAAAAAGATGCATTTGATCGAAGATCTCTTTACAATACCCCCAAAGTGCTTCTTGATCCCGAGCCAGCACTTCCTTCTCTTGATTGTCCTACCTATAAATTCCTACTTTCATTTTATTGGGCAAACAATAATCAAGTTCGGAAATCACTCCACATACGAGAGGGAAGCATTGGAGAATGGACAAGATGTAGAGATCGGCAAAATTACAACTTTGATGTTGAGAGTGCTTTTCCTTATCATGTCAACCTTAGTTCGAAAGGTTACAAGTCTTTGATTTATAGTGGGGATCATGATATGATTGTATCGCATTTGGACACTCAAGCATGGATTAAATCTTTAAATTATTCCATTGTTGAGGATTGGAGACCTTGGTTTATTGCAGATCAAGTAGCTGGATATACAAGAAGCTATGCAAATAAGATGACATTTGCCACTATAAAAGGTGGAGGGCACACGGCAGAATATACACAAAAAGAATGCAGTGTACCGGAGCCAATGATCCTCCTCCGCCTCTCTGTTTTCGCTGTTGTTCTTTTTCAGATATCCTCCGCCGTGGGCGCCGGCACAAGGTCTTACTGGACGGTGAAGTCCTTGCCGGGATTGTCGGGGCCTCTGCCTTTCGAGCTGGAAACAGGATACGTAGGAGTGGGAAATTCGGAGGAATTTCAGCTGTTTTATTATTTTATCAAATCTTATGGAAATCCCAAAACGGATCCTCTGATTTTGTGGCTCACTGGAGGCCCCCGTTGCTCTACTCTCTCTGGAATTGCCTTTGAAAGTGGTCCAATAAATTTTGAGGGAGAACCTAAAAATGGGAGCATTCCTCAAATAATCTTGAACCCTTACTCATGGACCAAGAAATCCAGTATAATATATATAGACTTACCGGTTGGCACGGGTTTTTCATATGCTAAAACTTCAAAAGATCATAAATCAGGAGATTATGAACAAGTTCACCATTCCCTTCAATTTTTGAGAAAGTGGTTGGTCAATCATCCAGAATTTATATCAAATCCATTCTATGTTGCTGGAGATTCTTACGCTGGTATGATTATTCCAGTTGTTGTTAAAGAAATTTTAGAAGGAAATGATAAACATATTTTTCCATTCATAAATTTTCAGGGATACATATTGGGAAATCCTATCACTACCCCTCATTCAAATAAAAATTTTGAAATCCCATTTGCTCATAACATGGCCCTCATCTCGGATGAATTGTTTGAGTCGTTGAAAACTAGTTGCCAAGGAGAATACGTGAACATCGATCCAAATAACGTGGAGTGCTTAAGACATCATGATATGTTTAAAAAGTGTACTTCTACCGTTCTAGATGGATGTATTTTATGGCCCAAGTGTTCATCTTTGAAAGAACCAGATGTGTCTGAACCAAATATGTTTGATACTCATAGATCTCTCTACAACGTTCCTGTTGATCGTAGATGTCGTGTGTATGACTACCTTCTTGCTTATTATTGGGCTAACAATGACCAAGTTCGAAAAGCACTTCATATACGTGAGGGAAGCATTGGAGAATGGATTAGATGTCGTGATAGAGATCATTACAATGTTGAGCATGATAGTGTTTTTCCTTATCACGTGAACCTTAGTTCTAAAGGTTATCGATCACTAGTCTATAGCGGAGACCATGATATGATAGTATCGCATATGGACACTCAAGCATGGATCAAATCTCTAAATTATTCTATAGTAGATGATTGGAGGCCATGGTACATCGATGATGAAGTTGCCGGTCCTCTCCGCCAACTCTTGGTGGACGGTGAAGTTTCTTCCTGGATTTTCAGGTCCTCTTCCTTTCGTACTCGAAACTGGGAAATCCTCAAAAAGATCCTCTCCTTTTGTGGCACACCGGCGGCCCCGGTTGCTCCGTGGTTGGTCGAGTATCATCCAGAATTTATATCTAATCCATTCTATGTTGGTGGAGACTCATATTCTGGTCTTATTGTTCCCGTTGTTACTCATGAAATATTAGAAGGAAATAAACGTGTTTTGCCATTAGTAAATCTTCAGGGATACATATTGGGAAATCCTATCACTATCCGTAATTCACATAAAAATTTTGCAATCCCTTTTGCTCATAGAATGACACTCATCTCTGATGAATTATTCGAGTCTTTGACGACTAGTTGCAATGGAGAGTATGTGAACATTGATCCTACTAATGTTGAGTGCTTGAGACATTATGATACCTACGAAAAGAGTGTTTCAAAAATTTACGATGGGAATATTTTGTTGCCAAAATGTCCCTCGGCATCTTGGAAATTACAAGATATGTCTGCTCGAAGATCTCTCTACAAAACTCCCAAAGTACTCCGTGATCTAAAGCTACCACTTCCAACTCTTGGCTGTCCTACATATAAATACTTACTTTCTCACTACTGGGCTAACGATAATCAAGTTCGAAAAGCGCTTCACATTCAAGAGAGAAGCATTGGAGAATGGACAAGATGTCAGTATAGAGATGATTACAGTTTTGATATTGACAGTTCATTGCCGTATCATGTGAACCTTAGCTCTAAAGGTTATCGATCTTTAATCTATAGTGGAGATCACGATATGGTGGTGTCTCATTTAGACACTCAAGCATGGATTAAATCTTTAAATTATTCCATTGTTGATGACTGGAGGCCATGGTTCGTCATGGATCAAGTAGCGGGATACACGAGAACCTTTGCAAATAAGATGACATTTGCAACAATAAAGGGTGGAGGGCATACAGCAGAATACACACGACAAGAATGTAGCATCATTTTCAATAGATGGATAACTAATAAATCA 3744 39.53 MKLSGCGGHTPQCSILFKGWIVALTMPTAVFRVSVLFVSVFQIISAAGSSRWTVEYLPGFAGRLPFELETGYVGVGDLEEVQLFYYFVKSEGNPKTDPLLFWLTGGPGCSALTALAFEVGPINFKIERYNGSLPKIILNPYSWTKKSSIIMVDLPVGTGFSYGKTPQSLKTGDFNQVHHSIQFFKKWLTNHPEFISNPFYVGGDSYSGIIIPVIAQEILEENKYAPYVNLQGYILGNPVTIRDTYQNFAIPFAHKMTLISDELFESLTSSCKGEYINIDPSNVDCLRHYNTYQKCVSKIEKSSILLPKCSFHSPKKQKDAFDRRSLYNTPKVLLDPEPALPSLDCPTYKFLLSFYWANNNQVRKSLHIREGSIGEWTRCRDRQNYNFDVESAFPYHVNLSSKGYKSLIYSGDHDMIVSHLDTQAWIKSLNYSIVEDWRPWFIADQVAGYTRSYANKMTFATIKGGGHTAEYTQKECSVPEPMILLRLSVFAVVLFQISSAVGAGTRSYWTVKSLPGLSGPLPFELETGYVGVGNSEEFQLFYYFIKSYGNPKTDPLILWLTGGPRCSTLSGIAFESGPINFEGEPKNGSIPQIILNPYSWTKKSSIIYIDLPVGTGFSYAKTSKDHKSGDYEQVHHSLQFLRKWLVNHPEFISNPFYVAGDSYAGMIIPVVVKEILEGNDKHIFPFINFQGYILGNPITTPHSNKNFEIPFAHNMALISDELFESLKTSCQGEYVNIDPNNVECLRHHDMFKKCTSTVLDGCILWPKCSSLKEPDVSEPNMFDTHRSLYNVPVDRRCRVYDYLLAYYWANNDQVRKALHIREGSIGEWIRCRDRDHYNVEHDSVFPYHVNLSSKGYRSLVYSGDHDMIVSHMDTQAWIKSLNYSIVDDWRPWYIDDEVAGPLRQLLVDGEVSSWIFRSSSFRTRNWEILKKILSFCGTPAAPVAPWLVEYHPEFISNPFYVGGDSYSGLIVPVVTHEILEGNKRVLPLVNLQGYILGNPITIRNSHKNFAIPFAHRMTLISDELFESLTTSCNGEYVNIDPTNVECLRHYDTYEKSVSKIYDGNILLPKCPSASWKLQDMSARRSLYKTPKVLRDLKLPLPTLGCPTYKYLLSHYWANDNQVRKALHIQERSIGEWTRCQYRDDYSFDIDSSLPYHVNLSSKGYRSLIYSGDHDMVVSHLDTQAWIKSLNYSIVDDWRPWFVMDQVAGYTRTFANKMTFATIKGGGHTAEYTRQECSIIFNRWITNKS 1248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32729523 32761902 - ClCG05G020700.1 Cla05g02115 273605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02115 1248 Gene3D alpha/beta hydrolase 54 478 IPR029058 -
Cla05g02115 1248 Gene3D alpha/beta hydrolase 517 918 IPR029058 -
Cla05g02115 1248 Gene3D alpha/beta hydrolase 919 1248 IPR029058 -
Cla05g02115 1248 PRINTS Carboxypeptidase C serine protease (S10) family signature 609 619 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 PRINTS Carboxypeptidase C serine protease (S10) family signature 1217 1230 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 PRINTS Carboxypeptidase C serine protease (S10) family signature 644 669 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 PRINTS Carboxypeptidase C serine protease (S10) family signature 596 608 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 505 900 - -
Cla05g02115 1248 SUPERFAMILY alpha/beta-Hydrolases 948 1247 IPR029058 -
Cla05g02115 1248 SUPERFAMILY alpha/beta-Hydrolases 510 904 IPR029058 -
Cla05g02115 1248 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 505 900 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 475 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 SUPERFAMILY alpha/beta-Hydrolases 54 475 IPR029058 -
Cla05g02115 1248 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 946 1247 - -
Cla05g02115 1248 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 45 475 - -
Cla05g02115 1248 Pfam Serine carboxypeptidase 946 1246 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 Pfam Serine carboxypeptidase 515 903 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 Pfam Serine carboxypeptidase 58 475 IPR001563 GO:0004185|GO:0006508
Cla05g02115 1248 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 946 1247 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02115 Cla-Chr5:32729523 Cla05g02666 Cla-Chr5:37847105 7.03E-87 dispersed
Cla05g02115 Cla-Chr5:32729523 Cla05g02116 Cla-Chr5:32762058 5.10E-12 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02115 K16296 - sly:101252581 925.235