Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02200 ATGGAACTCCCTTTCTCCACATCCCACATCTCAATGGCTTCTTTCTCTTCTTCATCCACTTTCTTCCTCATTGCCTTTTTCCTCTCCGGTTTAATCTTCTTCCTCACCAGAACACTCATAAAAAACCGCCCCAAACTCCCTCCTGGACCGCTCGGTTGGCCCATCGTCGGCAACCTCTTCCAAGTCGCCCGGTCCAAAAAACCCTTCTTCGAATACATCGAAGATCAACGCCGAATTTACGGCCCAATTTTTACCCTCAAAATGGGCACTACAACAATGGTTGTATTAAGCGATTCGAATCTCGTTCACGAAGCTCTAATTAAAACGGGGGCAGTTTTTGCTGACCGGCCCAGAGAAAATCCTACCCGGATTATATTCAGCAGCAATAAATTTTCAGTCAATTCGGCGGTTTACGGCCCTATATGGCGGACCCTCCGCCGCAACATGGTGGAAAATATGCTCAGCTCCGGCAAGGTAAAGGAGTTTCATGGCGTGAGAGAAAAAGCAATGGAAAAATTCGTGAAGCGGTTACGAGATGAAGCAAAGGCTAATAACGGCGTCGTTTTGGTACTTAAAAACGCGCGTTTTGCGGTGTTTTGGATTCTGTTGACAATGTGTTTCGGATTCGAGATGGAAGAAGAAACGGTTGAGAAAATGGACGAGATTCTCAAATCCGTTTTGATCACACTCGAACCAAGAATCGACGATTATTTCCCGATTTTAACTCCTTTTTTCTCTAGAGAAAAAAATCGAGCGAATCTCGTTCGGAAAAAACAAGTCGAATTCGTCATTGAGTTAATTAATCGGCGGCGGCGGGCGCTGGAGAATCCGGCGTCCGACGGCACTGCGACGTCATTTTCGTACCTAGACACGCTTTTCGATTTGAAAATCGACGGCCGCGGTGGCAGAGGGAAATCGTCGGCAACGGACGAGGAATTGGTGACACTTTGTTCGGAGTTTTTGAACGGCGGGACGGACACGACGGCGACGGTGATAGAGTGGGGGATGGCGGAATTGATAGGGAATCCGGAAGTTCAGAGGAAAGTTGTGGAAGAAATTAAAGAGACGGTTGGTGAGAGAAAAGTAGAAGAAAAAGACATAGAGAAAATGGTATATTTACAAGCGGTTGTGAAAGAAGTGCTGCGGAAACATCCTCCGACGTTCTTTGTTTTGACGCACTCCGTGACGGAGCCGGCGAAATTGGCAGGATACGACATCCCGAAAGACACGAACGTGGAATTCTTCCTACCCGCCATCGGAAGGGATCCGAAGCTGTGGAAGAATCCAGAGAAATTCGAACCGGAAAGATTTTACTCCGGCAAGGAAGAAGCCGACATTACTGGCGTCACTGGCGTCAGAATGATGCCGTTCGGCGTAGGGCGGCGGATCTGCCCGGGCTTGGGATTGGCCACCGTCCACATTCATTTAATGCTTGCCAGAATGCTGCAGGAATTTGAATGGACCGCCTATCCGCCGTCCAGCTCCGTCGACTTTTCATGGAAGATGGAGTTCACCGTCGTCATGAAGAATCCTCTTAGAGCTATTGTCAAATCAAGGGTTTAA 1563 48.24 MELPFSTSHISMASFSSSSTFFLIAFFLSGLIFFLTRTLIKNRPKLPPGPLGWPIVGNLFQVARSKKPFFEYIEDQRRIYGPIFTLKMGTTTMVVLSDSNLVHEALIKTGAVFADRPRENPTRIIFSSNKFSVNSAVYGPIWRTLRRNMVENMLSSGKVKEFHGVREKAMEKFVKRLRDEAKANNGVVLVLKNARFAVFWILLTMCFGFEMEEETVEKMDEILKSVLITLEPRIDDYFPILTPFFSREKNRANLVRKKQVEFVIELINRRRRALENPASDGTATSFSYLDTLFDLKIDGRGGRGKSSATDEELVTLCSEFLNGGTDTTATVIEWGMAELIGNPEVQRKVVEEIKETVGERKVEEKDIEKMVYLQAVVKEVLRKHPPTFFVLTHSVTEPAKLAGYDIPKDTNVEFFLPAIGRDPKLWKNPEKFEPERFYSGKEEADITGVTGVRMMPFGVGRRICPGLGLATVHIHLMLARMLQEFEWTAYPPSSSVDFSWKMEFTVVMKNPLRAIVKSRV 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33704012 33706652 + ClCG05G021600.2 Cla05g02200 273690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02200 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Cla05g02200 520 SUPERFAMILY Cytochrome P450 47 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PANTHER CYTOCHROME P450 77A4 16 518 - -
Cla05g02200 520 Pfam Cytochrome P450 47 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 Gene3D Cytochrome P450 39 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02200 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 518 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02154 Cla-Chr1:35685221 Cla05g02200 Cla-Chr5:33704012 4.23E-146 dispersed
Cla05g02200 Cla-Chr5:33704012 Cla09g01651 Cla-Chr9:33018725 4.12E-119 dispersed
Cla06g00142 Cla-Chr6:1619095 Cla05g02200 Cla-Chr5:33704012 2.23E-107 transposed
Cla05g02200 Cla-Chr5:33704012 Cla08g00822 Cla-Chr8:20641581 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02200 K21995 - csv:101217068 882.863