Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g02205 | ATGGCAAATGCCCAGTCTCCTTCCTTCCCCTCCTCCTCTTCTTCTTCTTCTTTCTTCTGCGGCGCCATTTTTACTGCGCCTCTTTTCGCTCCGACACCGTCCCCGATTCCCACGGGTTCGGCTTTGATTCAAGCAGCTTTGAGAACTTCAGCACTTTTCGTAGACTCGATGGAACAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTAGTTTACAAGGCACGCGATCGTGTCACAAATGAGACTATTGCGTTGAAGAAGATCCGTTTGGAGCAAGAAGATGAGGGAGTGCCAAGCACAGCCATTCGCGAAATTTCACTGTTGAAGGAAATGCAACATGGCAACATTGTAAGGTTACAAGATGTAGTGCATAGCGAGAAGCGGCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCATATGGACTCCTCTCCTGAATTTGCAAAGGATCCACGCCAAATGTTTCTTTATCAAATTCTTCGTGGCATTGCATACTGTCATTCTCATAGAGTTCTTCACCGAGATCTAAAACCCCAAAATCTACTGATTGATCGTCGTACCAATGCCCTGAAGCTTGCTGATTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACCCTTTGGTACCGAGCACCAGAAATATTACTTGGTTCCCGACATTATTCCACCCCCGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTTAATCAGCGGCCATTGTTCCCTGGAGACTCTGAGATTGATGAACTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAATCTGCTTTCCCCAAGTGGCCTCCCAAGGACCTGGCTTCTGTAGTTCCTAATCTTGAAGCCGCTGGCATTGATCTTCTCTCTAAAATGCTTTGCTTGGATCCCACCAAAAGAGTCACTGCCAGGAGTGCCCTCGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA | 1047 | 45.46 | MANAQSPSFPSSSSSSSFFCGAIFTAPLFAPTPSPIPTGSALIQAALRTSALFVDSMEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 33751217 | 33758041 | + | ClCG05G021670.2 | Cla05g02205 | 273695 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g02205 | 348 | Gene3D | Phosphorylase Kinase; domain 1 | 57 | 140 | - | - | |
Cla05g02205 | 348 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 346 | - | - | |
Cla05g02205 | 348 | PANTHER | - | 58 | 345 | - | - | |
Cla05g02205 | 348 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 344 | IPR011009 | - | |
Cla05g02205 | 348 | Pfam | Protein kinase domain | 60 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g02205 | 348 | PANTHER | CELL DIVISION PROTEIN KINASE | 58 | 345 | - | - | |
Cla05g02205 | 348 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 177 | 189 | IPR008271 | GO:0004672|GO:0006468 | |
Cla05g02205 | 348 | SMART | serkin_6 | 60 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g02205 | 348 | CDD | STKc_CDK1_CdkB_like | 60 | 341 | - | - | |
Cla05g02205 | 348 | ProSitePatterns | Protein kinases ATP-binding region signature. | 66 | 89 | IPR017441 | GO:0005524 | |
Cla05g02205 | 348 | ProSiteProfiles | Protein kinase domain profile. | 60 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g02205 | Cla-Chr5:33751217 | Cla11g01852 | Cla-Chr11:32061152 | 1.56E-119 | dispersed | |
Cla06g00228 | Cla-Chr6:2759699 | Cla05g02205 | Cla-Chr5:33751217 | 3.53E-06 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80587 | PF00069 | Pkinase | 3.80E-80 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g02205 | K02206 | - | csv:101217311 | 582.022 |