Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02221 ATGAGCTCACATCAAAACCTTTCCCTTTCTCTAATTTCAATGTCTTCTCTAATTTCAAGGCTTTTATTTCTCAATTTCTGCTTCTCTATACTCTTTTTCAGCTCAAATTCACAAGATAATGACTCTCAAAAGACATATATTGTTTATATGGGAAGTCATCCAAAAGGGAAGGTTTCAACTTCATCTCACCATATAAGATTGCTAAAAGAAACCATTGGCAGTACTTTTCCTCCACATTCTTTACTCCATAGCTACAAGAGAAGCTTCAATGGATTTGTGGCGAAGCTGACTGAAGCTGAAGCAAAAAAGGTTTCAGAAATGGAAGGGGTAATATCAGTTTTCCCAAATGGGAAAAAACAACTCCACACAACAAGATCTTGGGACTTCATGGGTTTCTCCGAACAAGTGAAGAGAGTTCCGGCGGTGGAAAGCAACGTCATTGTCGGAGTATTCGACAGCGGAATTTGGCCGGAATCTCCTAGTTTTCACCACACAGGATACGGTCCGCCGCCACCCAAGTGGAAGGGCAGTTGTGAAGTCTCCGCCAATTTCTCTTGCAACAATAAAATCATCGGAGCTCGTTCATATCGTAGTGACGGTAAACATCCAGAAGGTGACATCAAAGGTCCAAGAGATTCGGATGGCCACGGGACTCACACAGCATCAATTGTAGCTGGAGGGTTGGTTCGACAAGCGAGCATGTTGGGACTCGCCCTTGGCACAATAAGGGGTGGAGTCCCATCAGCACGCATTGCCGCATACAAAGTATGTTGGTCTGATGGCTGCACCGACGCTGACATTCTCGCCGCATTTGATGATGCCATTGCTGACGGTGTCGATATCATCTCCGGTTCTCTTGGAGGATCAAGGGTCAAAGATTACTTCAACGACTCCATAGCCATTGGATCCTTCCATGCAATGAAGAAGGGAATTCTTTCGTCATTGGCCGTTGGAAATAACGGCCCCGATTTTACAAGCATTGTGAACTTCTCTCCGTGGTCGTTGTCGGTGGCGGCTACCACCACTGATCGAAAATTCGAAACTAAAATTAAGCTTGGAGATGGAAGAGAATTCAATGGAGTCAGCATCAATACATTTGATATAAATGGAAAACAAATTCCATTGGTTTACGCCGGAGATATTCCTAAAGCTCCCTTTGACAGCTCCGTGTCAAGGATGTGCTTTGAGAATACAGTAGACTTGGAGTTGGTAAAGGGTAAAATTGTAGTATGCGATTCATTAGCCGTTCCAGAAGGAGTTGTGGCCGTAAAAGGTGCGGTGGGTATTATAATGCAAGACGATTCTTCACAAGATGATACCAACTCTTTTCCATTGCCTGCTTCTCATCTTGGCCCAAAGCCTGGTGCTCTCATTCTCTCTTATATCAACTCAACCAACAGCCTTCCAACAGCAACTATAATGAAGAGCACAGAAAGGAAACGTAAAAGAGCTCCTTTTGTTGCATCTTTTTCTTCAAGAGGTCCAAACCCAATAACCCCCAACATTCTCAAGCCGGATTTATGTGGTCCAGGAGTGGAAATTCTTGCAGCTTGGCCTGCAACGGCTTCACCTTCGGGAGCTGAAGAAGATAGTAGAAGAGTTGTTTATAACATCCTTTCCGGAACTTCAATGGCTTGCCCACATGTCACTGCAGCAGCTGCTTATGTTAAGTCCTTTCATCCTACTTGGTCTCCTGCTGCCCTTAAATCTGCCCTTATCACTACAGCATTTCCAATGAGCCTTAAACGTAATCCAGACAGAGAGTTTGGACATGGTGCCGGACACATAAATCCACTAGGCGCAGTGCATCCTGGATTAATCTACAATGCTTCTGAGATTGACTATGTAAAGTTTTTGTGCGGCCAAGGTTATACCACCGAGTTGCTCCAACGAGTCTCGGAAGACAACAACACTTGTCTTTCGAACAATTCCGACACAGTATTCGACCTTAACTATCCTTCCTTTGCTCTTTCCACAAATATCTCGAAACCAATTAACCAAGTTTACAAAAGGAGTGTCACCAATGTTGGATCAAAAAATGCAACATATAAAGCCACCATAATTAATCCATGGAATAATCTTGAGATCAAAGTAAAGCCTTTTATTCTTTCATTCAAGAATTTGGGAGAGGAGCAAAGCTTTGAGCTTACAATTAAAGGAAGAATTAGTAAAAATATTCAATCAGCTTCTTTGGTATGGGATGATGGGAAACACAAAGTGAGGAGTCCAATAACAGTATTTGATGCTAATATTCACTCTTCTTAA 2265 42.91 MSSHQNLSLSLISMSSLISRLLFLNFCFSILFFSSNSQDNDSQKTYIVYMGSHPKGKVSTSSHHIRLLKETIGSTFPPHSLLHSYKRSFNGFVAKLTEAEAKKVSEMEGVISVFPNGKKQLHTTRSWDFMGFSEQVKRVPAVESNVIVGVFDSGIWPESPSFHHTGYGPPPPKWKGSCEVSANFSCNNKIIGARSYRSDGKHPEGDIKGPRDSDGHGTHTASIVAGGLVRQASMLGLALGTIRGGVPSARIAAYKVCWSDGCTDADILAAFDDAIADGVDIISGSLGGSRVKDYFNDSIAIGSFHAMKKGILSSLAVGNNGPDFTSIVNFSPWSLSVAATTTDRKFETKIKLGDGREFNGVSINTFDINGKQIPLVYAGDIPKAPFDSSVSRMCFENTVDLELVKGKIVVCDSLAVPEGVVAVKGAVGIIMQDDSSQDDTNSFPLPASHLGPKPGALILSYINSTNSLPTATIMKSTERKRKRAPFVASFSSRGPNPITPNILKPDLCGPGVEILAAWPATASPSGAEEDSRRVVYNILSGTSMACPHVTAAAAYVKSFHPTWSPAALKSALITTAFPMSLKRNPDREFGHGAGHINPLGAVHPGLIYNASEIDYVKFLCGQGYTTELLQRVSEDNNTCLSNNSDTVFDLNYPSFALSTNISKPINQVYKRSVTNVGSKNATYKATIINPWNNLEIKVKPFILSFKNLGEEQSFELTIKGRISKNIQSASLVWDDGKHKVRSPITVFDANIHSS 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33880920 33888407 + ClCG05G021860.2 Cla05g02221 273711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02221 754 Pfam Fibronectin type-III domain 649 746 IPR041469 -
Cla05g02221 754 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Cla05g02221 754 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 122 IPR037045 -
Cla05g02221 754 PANTHER PUTATIVE-RELATED 33 747 - -
Cla05g02221 754 ProSiteProfiles Serine proteases, subtilase domain profile. 126 602 - -
Cla05g02221 754 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 747 IPR045051 -
Cla05g02221 754 Gene3D - 619 748 - -
Cla05g02221 754 CDD Peptidases_S8_3 119 576 IPR034197 -
Cla05g02221 754 Gene3D Peptidase S8/S53 domain 145 615 IPR036852 GO:0004252|GO:0006508
Cla05g02221 754 Pfam Subtilase family 144 592 IPR000209 GO:0006508|GO:0008236
Cla05g02221 754 Pfam Peptidase inhibitor I9 45 121 IPR010259 -
Cla05g02221 754 Gene3D - 343 480 - -
Cla05g02221 754 SUPERFAMILY Subtilisin-like 121 606 IPR036852 GO:0004252|GO:0006508
Cla05g02221 754 MobiDBLite consensus disorder prediction 195 220 - -
Cla05g02221 754 CDD PA_subtilisin_like 350 473 - -
Cla05g02221 754 MobiDBLite consensus disorder prediction 195 215 - -
Cla05g02221 754 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Cla05g02221 754 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Cla05g02221 754 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00097 Cla-Chr1:875191 Cla05g02221 Cla-Chr5:33880920 0 dispersed
Cla05g02221 Cla-Chr5:33880920 Cla07g00342 Cla-Chr7:4091437 0 dispersed
Cla05g02221 Cla-Chr5:33880920 Cla04g00975 Cla-Chr4:24875088 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02221 - - csv:101203698 1327.38