Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02275 ATGGCAAAATTTCCTTCAATTTCCCTTTTTTTTCTCCTCTGCAACTTATGCCTTTCCAGGGCTTCTTTGAATGAAGAGGGCAATGCCCTTTTATCATTCAAACAATCCATTACTGAAGACCCAGAGGGGTGTTTCAGCAACTGGAATTCTTCCGATGAAACCCCATGTGGTTGGAATGGAGTTACATGCAAGGATCTAAGAGTTGTTTCTCTTAGTATTCCTAAGAAGAAACTTAATGGGGTTATTCCTTCTTCTCTGGGGTTTCTGTCTGAGCTTCGTCATGTGAATCTCAGGAGTAATAAGCTCCATGGAACCTTGCCAATGGAGCTTTTTCAAGCTAATGGAATTCAAAGTTTGGTGCTTTATGGAAATTCCTTCACTGGGTCTCTTCCAAATGAGATTGGTAAGCTAAAAAACCTTCAAATCTTGGATTTGTCTCGGAATTTCTTTAATGGGTCCTTGCCTGTTTCCTTAATGCAATGCACAAGGTTGAGAGTTCTTGATCTTGGTCAGAACAATTTTTCCAATTCTCTGCCTACTGGGTTTGGTTCCAATTTGAATTTCTTGGAAACATTGGATCTTTCTTACAATAAGTTTAATGGTTCAATTCCAATGGATATCGGTAATTTGTCTAGCTTACAAGGCACTGTTGATTTCTCACATAATTTGTTTTCTGGCTCTATCCCAGCCAGCCTGGGAAACCTTCCTGAAAAAGTTTATATTGATCTTACTTATAATAATTTGAGTGGTTCAATACCCCAGAATGGTGCTCTTATGAACAGAGGGCCAACTGCTTTTATTGGGAATCCTGGCCTTTGTGGGCCGCCGTTGAAGAACCCATGTTCTTCTGAAACTCCGGGCGCAAGTTCCCCGTCCTCGTTCCCATTTTTCCCAGACAATTATCCACCTGGGAGTTCTGAGGGTAATGGTAATAAGTATGACAAAGGAGGGCTGAGTAAGAGCACTTTGGTTGCAATAATCATCGGTGACATTGTCGGTATTTGCCTGATCGGGTTGCTGTTTTCATATTGCTATTCGAGGTTTTGCACTCATAGAAATGGGAAGAAGGCAGACCAATCTAATTATGGATTTGAGAAGGGTGGAAAAGGAAGAAAAGATTGTCTCTGCTTTCAAAAGGGTGAATCCGAGAACGTTTCGGAGCATATCGAGCAGTTTGATTTGGTACCTCTGGATTCACAAGTGACGTTTGATCTCGATGAACTTCTCAAGGCATCGGCATTTGTTTTGGGAAAAAGTGGTATCGGAATCGTGTATAAAGTTGTGCTTGAAGATGGACTCACTTTAGCTGTGAGAAGATTGGGTGAAGGAGGTTCTCAAAGATTAAAAGAATTTCAAACTGAAGTTGAAGCAATTGGGAAGTTGAGGCATCCGAATGTAGTTAGCCTTAGAGCATATTATTGGTCTGTTGATGAGAAACTGCTTATTTATGATTACATACCAAATGGGAACCTTGCATCTGCTATTCATGGAAAGCCCGGAACAACATCGTTTACACCGTTAGCGTGGTCTGTTCGGTTTAAAATCATGAAAGGCATTGCGAAAGGGTTGGTTTACTTGCACGAGTTTAGCCCGAAAAAGTATGTTCATGGTAATTTGAAAACAAACAACATACTTCTTGGACACGACATGACACCGCATATTTCTAATTTTGGGCTTGCCCGCCTTGTTAACATTGCTGGAGGATCGCCAACTGTGCGATCAAGTCATATAGCAGAGGAAAAACCACAAGAGAAACAACTAAAGTCTGCCACCTCTGAAGCTAGTACATTCAGTTCTAGCATGAGTACTTACTACCAAGCACCAGAAGCGTTCAAAGTCGTGAAGCCATCACAGAAATGGGACGTTTACTCGTATGGTGTGATATTACTTGAAATGATCACCGGAAGGTTGCCTATAGTTCAGGTGGGAGCGTCGGAAATGGATCTTGTTCAATGGATTCAACTCTGCATTGAGGAAAAGAAGCCGCTTTCAGATGTAATAGACCCATCTTTGGCTCCGGACGACGATGCAGACGAGGAGATTATTGCAGTTTTGAAGATAGCATTAGCTTGTGTTCAAAATAGTCCAGAAAGAAGACCTGCAATGAGACATGTTTGTGATGGATTGAGCAGGTTGGGTGTCACTCCAAACTGA 2154 41.64 MAKFPSISLFFLLCNLCLSRASLNEEGNALLSFKQSITEDPEGCFSNWNSSDETPCGWNGVTCKDLRVVSLSIPKKKLNGVIPSSLGFLSELRHVNLRSNKLHGTLPMELFQANGIQSLVLYGNSFTGSLPNEIGKLKNLQILDLSRNFFNGSLPVSLMQCTRLRVLDLGQNNFSNSLPTGFGSNLNFLETLDLSYNKFNGSIPMDIGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSETPGASSPSSFPFFPDNYPPGSSEGNGNKYDKGGLSKSTLVAIIIGDIVGICLIGLLFSYCYSRFCTHRNGKKADQSNYGFEKGGKGRKDCLCFQKGESENVSEHIEQFDLVPLDSQVTFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRLKEFQTEVEAIGKLRHPNVVSLRAYYWSVDEKLLIYDYIPNGNLASAIHGKPGTTSFTPLAWSVRFKIMKGIAKGLVYLHEFSPKKYVHGNLKTNNILLGHDMTPHISNFGLARLVNIAGGSPTVRSSHIAEEKPQEKQLKSATSEASTFSSSMSTYYQAPEAFKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGASEMDLVQWIQLCIEEKKPLSDVIDPSLAPDDDADEEIIAVLKIALACVQNSPERRPAMRHVCDGLSRLGVTPN 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34394583 34397262 - ClCG05G022470.1 Cla05g02275 273765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02275 717 Pfam Protein kinase domain 416 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla05g02275 717 Gene3D Transferase(Phosphotransferase) domain 1 486 715 - -
Cla05g02275 717 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 713 - -
Cla05g02275 717 SUPERFAMILY L domain-like 25 278 - -
Cla05g02275 717 SUPERFAMILY Protein kinase-like (PK-like) 415 707 IPR011009 -
Cla05g02275 717 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 7 713 - -
Cla05g02275 717 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Cla05g02275 717 PANTHER OS05G0588300 PROTEIN 17 714 - -
Cla05g02275 717 Gene3D Ribonuclease Inhibitor 181 283 IPR032675 -
Cla05g02275 717 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Cla05g02275 717 MobiDBLite consensus disorder prediction 278 313 - -
Cla05g02275 717 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 17 714 - -
Cla05g02275 717 ProSiteProfiles Protein kinase domain profile. 410 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla05g02275 717 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Cla05g02275 717 CDD STKc_IRAK 416 712 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g00577 Cla05g02275 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02275 Cla-Chr5:34394583 Cla11g00735 Cla-Chr11:10497198 0 dispersed
Cla05g01097 Cla-Chr5:11361460 Cla05g02275 Cla-Chr5:34394583 4.56E-140 transposed
Cla01g00577 Cla-Chr1:6507054 Cla05g02275 Cla-Chr5:34394583 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80589 PF00069 Pkinase 2.30E-29 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02275 - - csv:101215811 1321.22