Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02317 ATGAGGACAACAAGAATGCCTACCATTAACCTAGATCAAATTCCAAGTTTTGAAGAACATGGTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGCCTGATTAGAGTTTACGGAAATGGGTATGTGGAAAGACCCCAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCAGAGCTCGGTGTTACTTCTTGGGATGTAGTTGTGGATAAGCTGAACAACCTTTGGGCTCGTTTCTATGTTCCAACACAGTGCCAGGAGAAGCTGCCTCTGATTGTATATTTCCATGGAGGTGGGTTTTGTGTTGGCTCGGCTGCTTGGAGTTGCTACCATGAGTTCCTGGCGAAGCTTTCTGCAAAAGCCTACTGTATAATTATGTCTGTGAATTATCGTTTGGCTCCAGAAAACCCTCTTCCAGCTCCTTATGAAGATGGATTAAAGACCCTTCAATGGTTGAAACAAGTTGCTTTTGTAGGGGCCAAGCAGAATTGGTGGTCAAGATACTGCGACTTTACCAAAATCTACCTTAGTGGTGATAGTGCCGGCGGCAACATAGCCTTCAATGTAGCCGCCAGACTTGGTGGTAAGATGACTGCTACTGGAGCTGTGGTCTTGAAACCGTTAGTTATTAAAGGTAGCATTTTGATACAACCATTTTTCGGCGGAGAGTCAAGGACCAAGTCAGAGAAGTTTCTTGTCCAACCTCCTCGTTCGCCACTGACGCTGGCGGTTTCTGATACGTACTGGCGGTTGGCGTTGCCTTCCGGGACAAACCGTGATCACGCATGGTGCAATCCTTCGGCAAAAGGATTGTTTAAGGTGGAGGATTTGAGGGTTTTGCCTAGTTTGATATGTATATCAGAAATGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGGGCGGGTAAGCTGATCAATTATGTGGTTTATGAAGGAGTTGGGCATGCGTTTCAGGTTCTGAACAAGTCACAACTCTCACAAACTCGGACCCTTGAAATGATTGATCATATCAAGGATTTCTTGTATTACATCTCTTCTCTGACTCGTACCCTTTACAAACCATTGAAATTTTTCGAAGATGGAAAGCAAAAGGAAAATAGTAAAGCTGCATTCCGTGGTGACCCTCCACCGGTGAGATGGAGTCCCATAGGAAGAAATAAAGTGCAACTGATCAAGGGACTAGATTCGATCATGACTATCATCGATCGAGACACTTGTTATTCCAACCGTTAA 1257 44.23 MRTTRMPTINLDQIPSFEEHGNGFDQHDVLVEEIEGLIRVYGNGYVERPQIVPCVSNALPPELGVTSWDVVVDKLNNLWARFYVPTQCQEKLPLIVYFHGGGFCVGSAAWSCYHEFLAKLSAKAYCIIMSVNYRLAPENPLPAPYEDGLKTLQWLKQVAFVGAKQNWWSRYCDFTKIYLSGDSAGGNIAFNVAARLGGKMTATGAVVLKPLVIKGSILIQPFFGGESRTKSEKFLVQPPRSPLTLAVSDTYWRLALPSGTNRDHAWCNPSAKGLFKVEDLRVLPSLICISEMDILKDRNLEFCSALHRAGKLINYVVYEGVGHAFQVLNKSQLSQTRTLEMIDHIKDFLYYISSLTRTLYKPLKFFEDGKQKENSKAAFRGDPPPVRWSPIGRNKVQLIKGLDSIMTIIDRDTCYSNR 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34773229 34774678 - ClCG05G022890.1 Cla05g02317 273807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02317 418 Pfam alpha/beta hydrolase fold 95 326 IPR013094 GO:0016787
Cla05g02317 418 PANTHER CARBOXYLESTERASE 6-RELATED 20 349 - -
Cla05g02317 418 Gene3D alpha/beta hydrolase 38 352 IPR029058 -
Cla05g02317 418 PANTHER ARYLACETAMIDE DEACETYLASE 20 349 - -
Cla05g02317 418 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 177 189 IPR033140 -
Cla05g02317 418 SUPERFAMILY alpha/beta-Hydrolases 30 349 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02317 Cla-Chr5:34773229 Cla07g01541 Cla-Chr7:32629776 2.64E-134 dispersed
Cla06g00022 Cla-Chr6:281828 Cla05g02317 Cla-Chr5:34773229 2.55E-43 dispersed
Cla05g02317 Cla-Chr5:34773229 Cla08g01546 Cla-Chr8:28187132 2.75E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02317 - - csv:101213887 694.886