Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02344 ATGCGATCGCCTCAGATCCTACCTATCACCCAGCCCCCTTCGTTGTCTCCATTTTCCTCCGGGGGCTCCGCCGCAAATTCGATTATGGCAACCACATCTACTGCCATAGACATAATGTTGCTTAAAGAAGACGATGAACAGACGACTGGAGTTCTTGTTTCTCCGTTGTTCGAGGATGATAAGACGATAGCTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCCTCCTCCACATCCAGTTCCTCCTCAGGAAGCTGTATGTACAAGCAGAAGCGGAGGCGAGTTAAGAGCGAAGACCTTTTGTCCTTTCTCTCCGGTGATGTCCGCCACCAGACTGTTGATCATGATGTCGAGAATGTCGATGTTGAGAGAGCTGAGAGATTTCTACTGACTCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCGAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGTGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAATATTAGAGAATTTGGAGGCGATCCAAACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAATATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCACATATAGCTGCCTGCACACTTTTGGAGCACGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATCTGGTAGACTACTTTCACTCTCGAGGTCTATCTCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCTTGGAAGAACCCAACATAGGACCAGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGGCTCTTCAAAGCGTTGGAGTGAAAGCCGAAACATTTTTCTATGAAGGAAAGACGCATACAGATGTATTTGTTCAGGATCCGTTGAGGGGTGGGAGAGATCAGATGTTTGAAGATCTTGTTGCGATCATCCATGCCAATGATGCAGAAGCATTGGCGAAAGATGCGGTGGCACCTCCAAGAAGACGCTTTGTACCTGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1542 43.32 MRSPQILPITQPPSLSPFSSGGSAANSIMATTSTAIDIMLLKEDDEQTTGVLVSPLFEDDKTIAHKPLLPRTSSYASSTSSSSSGSCMYKQKRRRVKSEDLLSFLSGDVRHQTVDHDVENVDVERAERFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGPAVSILPPIILFHGTADYSIPSDASKTFAEALQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEFMLMLARSVSPF 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35026993 35030863 - ClCG05G023180.1 Cla05g02344 273834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02344 513 PANTHER ARYLACETAMIDE DEACETYLASE 278 503 - -
Cla05g02344 513 PANTHER ARYLACETAMIDE DEACETYLASE 113 279 - -
Cla05g02344 513 SUPERFAMILY alpha/beta-Hydrolases 180 459 IPR029058 -
Cla05g02344 513 ProSitePatterns Carboxylesterases type-B serine active site. 306 321 IPR019826 -
Cla05g02344 513 Pfam BD-FAE 283 437 - -
Cla05g02344 513 Pfam BD-FAE 193 278 - -
Cla05g02344 513 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 278 503 - -
Cla05g02344 513 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 113 279 - -
Cla05g02344 513 Gene3D alpha/beta hydrolase 279 462 IPR029058 -
Cla05g02344 513 Gene3D alpha/beta hydrolase 173 278 IPR029058 -
Cla05g02344 513 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01271 Cla-Chr5:15034291 Cla05g02344 Cla-Chr5:35026993 1.32E-149 dispersed
Cla05g02344 Cla-Chr5:35026993 Cla06g00814 Cla-Chr6:11574799 8.74E-165 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02344 K15889 - csv:101206426 864.759