Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g02353 | ATGGCGGCCGTATCACCGGCGCCTAATTCATCTCCGTCGCCGGCTTCTCCCTCCCCTCCATCTCCGCCGCCTCCGGTCGCATCTAATTCCCCACCTAGTACTCCGTCACTGTCGCCGCCGCAACAATCGCCTCCTCCGAATCCGTCTGACTCCGCGACTCCCACTTCATCTCCTCCTCCGCCGTCTCGTCAACCATCTGCTGCTTCACCTCCACCTGCATCTGAAACTCCGCCGCCATCAACACCCGCATTGTCTCCTCCGCCGGCAACTCCACCATCAACTCCGTCCAATGCTCCACCCCCATCAACACCGGACCCTCCACCACCATCAGCAACCCCACCAGTAAGCTCCACTCCACCAACGCCATCTAATTCCCCACCAAATTCATCTCCACCTCCTGCAGCACAGCCTCCTCAATCCCCTCCACAATCATCAAAACCACCTGAAAACCCCCCTCCGCTGCCGCCGCCACCACCACAAGCAAACCCGCCGGATAATCCAGCGCCGCCGCCACAGCCCACAAACCCACCTGGGAATTCACCTCCTACGCCACCATCAGCACTGCCTCCAGCTACCTCACCTCCTTCCCCAGCATCCATACCTCCAAGAAATTCACCTCCACCCCCAAGGCTTACTCCACCTCCCGGTGAGCCCTCACTTTCAAGTCCTCCTCCCAGGTCATCACCGCCCCCATCTCCTCCACCACCGCCGCCGTCACATCTTTCTCCTCCATTACCGTCTAAACCCCCAACATTGCCGTCAGGAAATCGTACGGACGATGGTTCTGGTCCTATTGATGGAGGAGCAAACTCGAAATCCAACAGCAATGGAGGGATCAGTAGTGGGGGTGTGATCGCCATTGGAGTAGTGGCAGGAATTATAGTGCTTTCCATAATTGGGTTTGTTGTTTGGTACATCAGGAGGCCAAGGAAAAATGATTCTGGGCGTGGAGGTTACATTATGCCATCCTCTCTGGGCTCCTCTCCTAAGTCGGAAACATCCCTTATGAAGGTCCATTCCACAGTTCATCAAGACATACATGCCAGTGGCAGTGGCAGTGGCAGTGGCAGTGGTGGAATATACACTCCAAAAGAGCTTGGTGGGTTGGGCAGTTCGAGGCCATTGTTTACATACGAAGAACTCTTCAAAGCAACAGATGCATTTTCTACTCAGAACCTTTTAGGAGAAGGAGGATTTGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGTGGTTGCAGTGAAGGAGCTAAAGATTGGTGGTGGTCAGGGTGAGCTGGAATTCAAAGCTGAAGTTGAGATTATTGGTCGTGTACACCATCGCCATTTGGTTTCTCTTGTGGGCTATTGTATTTCAGAGCATCAAAGGTTGCTGGTCTATGATTATGTCCCTAACAATTCCCTTTACTACCATCTTCATCTCAAAGGGGATGGCGAGCTCGTTCTGGAATGGACAAAGCGCATTAAGATCGCAGCTGGTGCAGCTCGGGGAGTTGCTTATCTTCATGAAGACTGCCACCCTCGAATTATCCACCGTGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCTGACTTTGGGCTTGCTAGATTAGCTCTCGATGAACAAACTCATATAACAACCCGTGTTGTGGGAACTTTTGGATATGTTGCCCCTGAATATGCATCGAGTGGAAAGTTAACTGAGAGGTCAGATGTATATTCTTTTGGAGTTGTACTTCTTGAGCTGATTACTGGTCGAAAGGCTGTGGACGCATCCCAACCAATGGGGAATGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAAAAATTGGTGGACCCAAGGCTTGAAAGGAACTACGTCGAGAGTGAAATGTTGGGGATGATAGGAATAGCTGCTGCTTGCGTGCGGCACGCGTCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGCCACAGCAGATTTAAGTAATGGAATGAGATTCGGGGAGAGTCAAGCTTTCGACTCCGGTCAACAATCTGCTGAAATTAGATTTTTCCGAATGCTGGCCTTCGGTAACCAAGATTACAGTTCAGACTTTTATAGCCAAGGTAGCTCAAATGCCTGA | 2154 | 50.88 | MAAVSPAPNSSPSPASPSPPSPPPPVASNSPPSTPSLSPPQQSPPPNPSDSATPTSSPPPPSRQPSAASPPPASETPPPSTPALSPPPATPPSTPSNAPPPSTPDPPPPSATPPVSSTPPTPSNSPPNSSPPPAAQPPQSPPQSSKPPENPPPLPPPPPQANPPDNPAPPPQPTNPPGNSPPTPPSALPPATSPPSPASIPPRNSPPPPRLTPPPGEPSLSSPPPRSSPPPSPPPPPPSHLSPPLPSKPPTLPSGNRTDDGSGPIDGGANSKSNSNGGISSGGVIAIGVVAGIIVLSIIGFVVWYIRRPRKNDSGRGGYIMPSSLGSSPKSETSLMKVHSTVHQDIHASGSGSGSGSGGIYTPKELGGLGSSRPLFTYEELFKATDAFSTQNLLGEGGFGSVYKGYLPDGRVVAVKELKIGGGQGELEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSLYYHLHLKGDGELVLEWTKRIKIAAGAARGVAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLARLALDEQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGNESLVEWARPLLNHALDSQDFEKLVDPRLERNYVESEMLGMIGIAAACVRHASAKRPQMGQVVRAFDSLATADLSNGMRFGESQAFDSGQQSAEIRFFRMLAFGNQDYSSDFYSQGSSNA | 717 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 35102124 | 35105835 | - | ClCG05G023260.2 | Cla05g02353 | 273843 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g02353 | 717 | Pfam | Protein kinase domain | 389 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g02353 | 717 | ProSitePatterns | Protein kinases ATP-binding region signature. | 394 | 416 | IPR017441 | GO:0005524 | |
Cla05g02353 | 717 | ProSiteProfiles | Protein kinase domain profile. | 388 | 666 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g02353 | 717 | SUPERFAMILY | Protein kinase-like (PK-like) | 371 | 661 | IPR011009 | - | |
Cla05g02353 | 717 | MobiDBLite | consensus disorder prediction | 10 | 251 | - | - | |
Cla05g02353 | 717 | Gene3D | Phosphorylase Kinase; domain 1 | 365 | 463 | - | - | |
Cla05g02353 | 717 | CDD | STKc_IRAK | 394 | 666 | - | - | |
Cla05g02353 | 717 | MobiDBLite | consensus disorder prediction | 1 | 277 | - | - | |
Cla05g02353 | 717 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 119 | 710 | - | - | |
Cla05g02353 | 717 | Gene3D | Transferase(Phosphotransferase) domain 1 | 464 | 680 | - | - | |
Cla05g02353 | 717 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 510 | 522 | IPR008271 | GO:0004672|GO:0006468 | |
Cla05g02353 | 717 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 119 | 710 | - | - | |
Cla05g02353 | 717 | SMART | serkin_6 | 388 | 667 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g02353 | Cla-Chr5:35102124 | Cla05g02542 | Cla-Chr5:36770135 | 5.54E-167 | dispersed | |
Cla07g01184 | Cla-Chr7:28822190 | Cla05g02353 | Cla-Chr5:35102124 | 2.21E-92 | dispersed | |
Cla07g01267 | Cla-Chr7:29757223 | Cla05g02353 | Cla-Chr5:35102124 | 1.76E-61 | dispersed | |
Cla01g00772 | Cla-Chr1:9015042 | Cla05g02353 | Cla-Chr5:35102124 | 5.37E-60 | transposed | |
Cla01g02279 | Cla-Chr1:36666684 | Cla05g02353 | Cla-Chr5:35102124 | 5.25E-50 | transposed | |
Cla02g02181 | Cla-Chr2:36930009 | Cla05g02353 | Cla-Chr5:35102124 | 7.35E-33 | transposed | |
Cla03g00394 | Cla-Chr3:4515225 | Cla05g02353 | Cla-Chr5:35102124 | 7.72E-63 | transposed | |
Cla05g00833 | Cla-Chr5:8234347 | Cla05g02353 | Cla-Chr5:35102124 | 5.71E-88 | transposed | |
Cla08g01146 | Cla-Chr8:24215393 | Cla05g02353 | Cla-Chr5:35102124 | 5.04E-56 | transposed | |
Cla02g00209 | Cla-Chr2:2179462 | Cla05g02353 | Cla-Chr5:35102124 | 1.77E-71 | transposed | |
Cla11g00502 | Cla-Chr11:5689932 | Cla05g02353 | Cla-Chr5:35102124 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80592 | PF00069 | Pkinase | 3.40E-43 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g02353 | - | - | cmo:103489228 | 842.032 |