Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla05g02384 | ATGGGGAAAACCGGGGCCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCATGTTCGAGTTCCTATTCAATCCAAACCGGACTCTGTTTCTGTAAAAACCGGTCCTAACAAGAAGGCTGATGATTCCGTTGATGACATTCAAGTTGGAGCTAAGCCAGTTTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCATTGGGCTCTCTCTCACACTGTCCAAAATCAAGACAACATTCTTCTTCTTCATCTCACTAAGCCTTCAACGTCAAAAGGAGAAGGACTGAGTAAGGAGACAGCACCGAGAGCTTATGAATTGGTTCATTCCATGAGAACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAAGTTGCGGTGGTGGAAGGAGGGAAGGAGAAAGGGGCAGTGATAGTGGAAGAAGCGAGAAAGCGAGGGGTGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGGTGTGGGCAGGCCACCGGTGGGGCGGCGGAGGCGGCGGTGGCGGTGGCGGTGTGGTGGAGTATTGTATACAAAATGCGAGCTGTATGGCGATTGCGGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA | 702 | 49.57 | MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGPNKKADDSVDDIQVGAKPVLGIGRKIMIVVDSTIEAEGALHWALSHTVQNQDNILLLHLTKPSTSKGEGLSKETAPRAYELVHSMRTLCQLKRPEVETEVAVVEGGKEKGAVIVEEARKRGVSLLVLGQKKRSTTWRLLMVWAGHRWGGGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35389710 | 35390636 | - | ClCG05G023590.1 | Cla05g02384 | 273874 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla05g02384 | 233 | CDD | USP_Like | 61 | 209 | - | - | |
| Cla05g02384 | 233 | Pfam | Universal stress protein family | 60 | 210 | IPR006016 | - | |
| Cla05g02384 | 233 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 233 | - | - | |
| Cla05g02384 | 233 | Gene3D | HUPs | 59 | 217 | IPR014729 | - | |
| Cla05g02384 | 233 | MobiDBLite | consensus disorder prediction | 25 | 45 | - | - | |
| Cla05g02384 | 233 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 60 | 213 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla04g01112 | Cla-Chr4:26343060 | Cla05g02384 | Cla-Chr5:35389710 | 5.25E-08 | dispersed | |
| Cla05g02384 | Cla-Chr5:35389710 | Cla08g00585 | Cla-Chr8:17672212 | 1.92E-25 | dispersed | |
| Cla05g00402 | Cla-Chr5:3651768 | Cla05g02384 | Cla-Chr5:35389710 | 6.48E-20 | transposed | |
| Cla04g01137 | Cla-Chr4:26564300 | Cla05g02384 | Cla-Chr5:35389710 | 2.42E-31 | wgd | |
| Cla05g02384 | Cla-Chr5:35389710 | Cla06g01526 | Cla-Chr6:28811165 | 3.70E-20 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla05g02384 | - | - | cmos:111458216 | 370.933 |