Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02393 ATCTTTGTTATTTCCCCATTGTTTGACCATATAACCAAAGTGGAGTTACACACTTGTAAGTTAAAGCATAGTAAAGAAGGGGCTATAGCATGTATGGTATTGTCCCTCTTCTTTTTGGGAACCTTCCCTGCTCTTTTAAGTCTACTTGAACGGCGAGGGCGTCTTCCTCAGCATACTTTTCTTGATTACTCCATAACAAATTATTTAGCTGCTGTAATTTTTGCGCTGACACTTGGTCAGTTTGGAAATAGCTCACCAGATAGACCAAATTTTATCCAACAGCTTTCTCAGGTGCAGGATAATTGGGCTTCTGTTATATTTGCTATGGCTGGTGGTGCAGCGCTGAGTATTGGAAATCTTTCTTCTCAATATGCTTTGGCATTTGTTGGTTTGTCAGTTACAGAAGTGCTCAATTGTAGCATAATAGTAGTTTTAGGCTCAACCATGAACTATTTTCTTGATGGCAAAATTAATAGAGCGGAGATTCTTTTCCCCGGCATTGCTTGCTTTTTGATTGCGGTTTTTCTTGGCTCTGCTGTTCACTTATCCAACACAGCTGATGACAAAATAAAGTTGGAAAGCTTGTCCATCGATTCAAAAAAGGAGTCCAAGGCAATTGCTGTCTCTCCAATATCAGGTCAGGTTGAATCAGCGGACCTGGAGAATGCCGATTGTTCCTCGCGAAATGCAGAAGCTGGAACTGCAGACTTTCTTGTTCAAGTTGAAAGCAGAAGGTCCATCAAGGTGTCTGGTAAGAGCACACTAGTTGGACTGTGCATAATTTTCTTTGCTGGTGTTTCCCTTTCACTCTTCTCACCTGCATTCAATTTGGCTACAAATGATCAATGGCACACTCTAAAGGAAGGCATCCCACACTTGTCTGTCTATACTGCATTTTTCTACTTCTCGACCTCTTTTTTCGTCTTGGCCGTCGTTCTTAACATCATCCTCCTTTACCGCCCTATACTGAACTTACCCAAAACATCATTCAAGGCTTATCTGAATGATTGGGATGGTAGAGGATGGGCCTTTTTGGCTGGATTTTTGTGTGGATTTGGCAATGGTTTGGAGTTCATGGGTGGTCAAGCTGCTGGATATGCAGCAGCAGATTCTGTGGAGGCATTTCCACTGGTGAGCACAATTTGGGGTGTTGTTCTGTTTGGAGAATACCGAAGATCGTCAAGAAAAACTCACGTTCTGCTAGTGAGCATGTTGTTTATGTTCACAGTAGCTGTTGTTAGTAAAGGTGGTGCTATAGCATGTATGCTTTTTGCGCTTTTCTTTTTGGGAACATGGCCTGCACTCTTGACTCTCCTCGAACGACGGGGGCGTCTTCCTCAGCATACTTACCTCGATTACTCCATAACAAATTTATTGGCTGCTGTAATTATTGCTTTTACATTTGGTCAGATTGGACAGAGCTCAGATGATAATCCAAATTTTATTCAACAACTTTATCAGGAGAATTGGCCTTCTGTCTTGTTTGCAATGGCAGGTGGTATAGTTCTAAGTCTTGGGAATCTTTCTACTCAGTATGCTTTTGCCTTTGTTGGTTTATCAGTTACCGAAGTGATCACTGCAAGTATAACAGTTGTTATAGGTACAACCGTAAACTACTTTCTCGACGACAAAATTAATAGAGCCGAGGTACTTTTCCCTGGTGTTGCTTGCTTTTTGATTGCTGTATGTCTTGGCTCTGCTGTTCACTCATCCAACACGGCTGATAACAAAGCGAAACTGGAAAAATTGTCTGCCGATACAGAAAAAGGGTTGAAGACAATTAATGCAGCTTCATTTTCAATCAAAGACTTGGAAAGTGTCGATTATTTTTCACTAAATGCAAAAGCTGGGACTGCAGACTTTTTGGTTGAACTTGAGAAGAGAAGATCCATTAAGGTGTTTGGTAAGAGCACATTCATTGGACTGTTCTTAACTTTCTTTGCTGGTGTTTGCTTTTCTCTCTTCTCACCGGCATTCAATTTGGCCACGAACGATCAATGGCACGCTCTAAAGGAAGGCGTCCCCCACTTGGATGTTTACACCGCATTTTTCTACTTCTCAATCTCTTGTTTTGTCTTAGCTGTCATTCTTAACGTTGTCTTCCTTTACCGCCCCATACTTAACTTGCCCAAAACAACATTCAAGGCTTATCTAAATGACTGGAATGGTAGAGGATGGGCCTTGTTGGCTGGATTATTGTGTGGATTTGGCAATGGCCTGCAGTTCATGGGTGAATACCGTAGATCGTCCAAGAAAACATATGCTTTGCTCATCAGCATGTTGTTTACGTTTATGGTTGCTGTTGGTGTTCTAATGGCTTCAGCAGGACATCGAAAGCAA 2340 41.75 IFVISPLFDHITKVELHTCKLKHSKEGAIACMVLSLFFLGTFPALLSLLERRGRLPQHTFLDYSITNYLAAVIFALTLGQFGNSSPDRPNFIQQLSQVQDNWASVIFAMAGGAALSIGNLSSQYALAFVGLSVTEVLNCSIIVVLGSTMNYFLDGKINRAEILFPGIACFLIAVFLGSAVHLSNTADDKIKLESLSIDSKKESKAIAVSPISGQVESADLENADCSSRNAEAGTADFLVQVESRRSIKVSGKSTLVGLCIIFFAGVSLSLFSPAFNLATNDQWHTLKEGIPHLSVYTAFFYFSTSFFVLAVVLNIILLYRPILNLPKTSFKAYLNDWDGRGWAFLAGFLCGFGNGLEFMGGQAAGYAAADSVEAFPLVSTIWGVVLFGEYRRSSRKTHVLLVSMLFMFTVAVVSKGGAIACMLFALFFLGTWPALLTLLERRGRLPQHTYLDYSITNLLAAVIIAFTFGQIGQSSDDNPNFIQQLYQENWPSVLFAMAGGIVLSLGNLSTQYAFAFVGLSVTEVITASITVVIGTTVNYFLDDKINRAEVLFPGVACFLIAVCLGSAVHSSNTADNKAKLEKLSADTEKGLKTINAASFSIKDLESVDYFSLNAKAGTADFLVELEKRRSIKVFGKSTFIGLFLTFFAGVCFSLFSPAFNLATNDQWHALKEGVPHLDVYTAFFYFSISCFVLAVILNVVFLYRPILNLPKTTFKAYLNDWNGRGWALLAGLLCGFGNGLQFMGEYRRSSKKTYALLISMLFTFMVAVGVLMASAGHRKQ 780
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35472487 35481333 - ClCG05G023720.1 Cla05g02393 273883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02393 780 Pfam Ureide permease 59 413 IPR009834 GO:0016021|GO:0071705
Cla05g02393 780 Pfam Ureide permease 449 744 IPR009834 GO:0016021|GO:0071705
Cla05g02393 780 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 744 777 IPR030189 GO:0016021|GO:0022857|GO:0071705
Cla05g02393 780 PANTHER BNAC09G21970D PROTEIN 2 412 - -
Cla05g02393 780 PANTHER BNAC09G21970D PROTEIN 744 777 - -
Cla05g02393 780 PANTHER BNAC09G21970D PROTEIN 413 744 - -
Cla05g02393 780 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 413 744 IPR030189 GO:0016021|GO:0022857|GO:0071705
Cla05g02393 780 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 2 412 IPR030189 GO:0016021|GO:0022857|GO:0071705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02393 Cla-Chr5:35472487 Cla09g00818 Cla-Chr9:8368862 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02393 - - soe:110791637 976.852