Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02395 ATGGCTTCGATCACAGCCGTAATTCAGTCTCCAATTCATCGGTTACCTTCCTTTCGATTGTCGTCTCCTAATAGAACAGTTCCCGCCAATTATTTCGTTCTTCAATGTCGATCACTTGCTTCTAAAGCTTTGAACTCGCCGTTTTCACCGTTGACGGAGAATCGAACTGTTTCGCCATCGGTGGAACTATCTAGCAAGGCTATTGGGCTCTTAAGTTCTAGACAACCGTTAAAGTCTCGAAGTGTAGTTCGTCTGCCGGTGGTGAGGGCGGCTGCAGCTGAAGCCGACGGAGCTTCCGATGGGTTGAATAGCCCTTCGAAGAGCTTTGCTGCAAGATTCCCAGCACTCATTACTGGTTTCTACTTCTTTATGTGGTACTTTTTAAATGTTATCTTCAACATACTCAACAAAAAAGTTTACAATTATTTTCCATATCCATACTTTGTCTCTGTCATACATCTTCTTGTTGGAGCTGGATATTGTCTCATTTCTTGGGCTGTAGGTCTCCCAAAACGTGCCCCGATAGATAAGGAGCTCTTGCTATTATTGACTCCAGTTTCGCTATGTCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTGTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAATGCTGCTGCTTCTCAATTTGTTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCTGTTGTTTTAGGTGTGTCAATGGCATCACTAACGGAACTTTCCTTCAATTGGACTGGCTTTGTGAGTGCAATGATTTCAAACGTTGCATTTACCTATAGAAGTATCTATTCGAAGAAAGCAATGACAGGAATGGACAGCACAAACGTGTATGCATACACCACAATAATCGCTCTTTTGTTTTGCATTCCTCCTGCAGTTATGATTGAGGGACCGCAGTTGCTGCAGCATGGTTTTAAGGATGCCATTGCCAAAGTGGGTCTACAAAAGTTCCTGTCTGACCTTTTCTGGATCGGCATGTTTTATCATCTATACAATCAGCTTGCTGCTAATACTCTTGAACGTGTTGCACCATTAACACACGCTGTAGGAAATGTATTGAAGCGAGTTTTTGTGATTGGATTCTCCATTGTTGTTTTTGGCAATAAGATTTCAACTCAAACTGGAATTGGTACTGCTATAGCAATTGCTGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAACAAAAACGGGTTAGCTTTTATGCTCTTTCTAATCATATCCAACTACTTCAAACTCACATTTTTTTGGCTAGTCTGTTTAATTCATAG 1323 41.87 MASITAVIQSPIHRLPSFRLSSPNRTVPANYFVLQCRSLASKALNSPFSPLTENRTVSPSVELSSKAIGLLSSRQPLKSRSVVRLPVVRAAAAEADGASDGLNSPSKSFAARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGAGYCLISWAVGLPKRAPIDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNVAFTYRSIYSKKAMTGMDSTNVYAYTTIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLAANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRVSFYALSNHIQLLQTHIFLASLFNS 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35508534 35512784 - ClCG05G023740.2 Cla05g02395 273885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02395 440 PANTHER TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC-LIKE ISOFORM X1 57 412 - -
Cla05g02395 440 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 116 414 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cla05g02395 440 PANTHER SOLUTE CARRIER FAMILY 35 57 412 - -
Cla05g02395 440 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 253 - -
Cla05g02395 440 SUPERFAMILY Multidrug resistance efflux transporter EmrE 298 405 - -
Cla05g02395 440 Pfam Triose-phosphate Transporter family 118 404 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02275 Cla-Chr1:36648025 Cla05g02395 Cla-Chr5:35508534 2.10E-117 dispersed
Cla05g01512 Cla-Chr5:24598117 Cla05g02395 Cla-Chr5:35508534 6.01E-11 dispersed
Cla05g02395 Cla-Chr5:35508534 Cla09g01867 Cla-Chr9:36382530 1.05E-64 dispersed
Cla05g02395 Cla-Chr5:35508534 Cla10g00522 Cla-Chr10:6894821 2.82E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02395 K15283 - csv:101221040 683.715