Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02423 ATGACGAGAGCTTTTAGAAGACGGACTTCGTATTCAAGGCCTACAGATCGCCTCCGATTCCAGGCATCGGCGGACGGTGCTACGAAATCTGGATTCATCAGAGATATGAAGCTGAAGGAGATCTTGACTACTTTGCTTATAGGCCTTCCCTTGGTTGTTTTTGTTGTTTTGGTTCTTAGGAATCCAGCGGTGGATCTCTCTCTGGGTTTTGCGGAAGCCAGAGCATTGGGAAGAGTGGCCACTAATGGCGGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTCGACTTTCCAATAGAGACAAACTTATTGGAGGTCTTCTCCTTCCTGGATTTGATGAAGGATCATGCTTAAGCAGATATCAATCCAGTTTATATCGAAGAACTTCAACCCACAAACCTTCTCCTTACCTCCTCTCGAAGCTTAGAGACTACGAAGCACTTCATCGACAGTGTGGTCCCCATACGAAACCATACGATGAAGCAGTAGAGCAACTCAGATCTGGCAGTAGTGTTAGTTTGTCAGAGTGTAAATATGTTGTGTGGATATCTTATAGTGGCTTGGGAAACAAGATACTCACTTTGGCTTCTGCATTTCTTTATGCCCTCCTTACCAATCGTGTCTTGCTTGTTGATCCAGGGAAGGATATGGCTGATCTATTTTGTGAGCCTTTCCCAGAAAAATCTTGGTTGCTACCAAATGACTTCCCCTTGGTGGATCAATTCAGCCATTTTGATTCGAAATTTCCTAATTGTCTTGGAAATATGCTTAAGATGAACACTCTAAACACGTCAACAGAATCACTCCCATCCTATCTATACCTACATTTGGTCCATGATTATGATGATCACGACAAGCTCTTCTTCTGTGATCAAGAACAGTCTCTTTTGGGCAGGATCCCTTGGCTAATACTGAAGACAGATAACTACTTTGTTCCATCTCTCTTCTTGATCCCATCGTTTGAGCACGAACTCAGTAACTTGTTCCCCCAAAAAGACACCGTCTTCCATCATCTGGGCCGGTATCTTTTCCACCCATCGAACCATGTTTGGGGACTAATAACGAGATACTACGAAGCATATCTATCAAGTGCTGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCGAGAGTGAACCGGGGCCATTTGAACATATAATGGATCAGATTTTAGGCTGTACTCTTAAGGAGAAGTTACTGCCTGAGGTAGACAAGGAAGGCTTCTCTTCTGTTCCTTTGGAACGCCCAAGTGTAAAAGCTGTTTTGATGACATCTTTAAGTTCTGGATATTATGAAAAATTGAGAAGCTTGTACTGGGAATACCCGACCACAAGTGGAGAGGTCATTGCAGTTTATCAGCCGAGCTACGAAATGTATCAGCAGACAGAGAAGAAGACTCACAATAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTTTGAGCGATGTGTTGGTGACCAGTGCATGGTCAACATTCGGGTATGTGGCTCAAGGACTCGGCGGATCGAAGCCATGGATTCTTTACAAGGCTGAGAACATGACCACGCCCGATCCACCATGTCGTAGGGCAATGTCAATGGAGCCTTGCTTTCATGCTCCTCCATTCTATGACTGCAAGGCAAAGAAAGGAATAGATACTGGTGAAGTTGTTCCACATGTAAGACATTGTGAAGACATGAACTGGGGGCTTAAGCTTGTTCACCATGAGGATTTATAA 1716 43.88 MTRAFRRRTSYSRPTDRLRFQASADGATKSGFIRDMKLKEILTTLLIGLPLVVFVVLVLRNPAVDLSLGFAEARALGRVATNGGSESSGSENGFSRLSNRDKLIGGLLLPGFDEGSCLSRYQSSLYRRTSTHKPSPYLLSKLRDYEALHRQCGPHTKPYDEAVEQLRSGSSVSLSECKYVVWISYSGLGNKILTLASAFLYALLTNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLVDQFSHFDSKFPNCLGNMLKMNTLNTSTESLPSYLYLHLVHDYDDHDKLFFCDQEQSLLGRIPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDTVFHHLGRYLFHPSNHVWGLITRYYEAYLSSADERIGIQVRVFESEPGPFEHIMDQILGCTLKEKLLPEVDKEGFSSVPLERPSVKAVLMTSLSSGYYEKLRSLYWEYPTTSGEVIAVYQPSYEMYQQTEKKTHNRKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTTPDPPCRRAMSMEPCFHAPPFYDCKAKKGIDTGEVVPHVRHCEDMNWGLKLVHHEDL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35747848 35750839 + ClCG05G024070.1 Cla05g02423 273913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02423 571 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 6 570 - -
Cla05g02423 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 570 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla05g02423 571 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla05g02423 571 Gene3D - 174 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01024 Cla-Chr7:26648898 Cla05g02423 Cla-Chr5:35747848 0 transposed
Cla04g01186 Cla-Chr4:27032300 Cla05g02423 Cla-Chr5:35747848 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02423 K13681 - csv:101216541 1048.88