Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02507 ATGGATTTGCTGCTTCACCTTCAGCTTCAACCATGGCAGCTTCATCTCTTCCTTTTCTTCCTTTCTGTTTCCCCTGTTTGTTATTGCCAACTCAGTCCCCCTCAAAATATCGAAACCTTCTACCCTTCCCCATTTATTCCTCAACCACCGTCGCCAATTTCGCCGTCGTCTTCACTTGACCATCCGCCGTCGTCCACGTCAACCAAGACCATCGCCACGGCGGTGGCTGTCACTGCAGTGGGTGTGGCTCTGCTTTCCACGTTGTTCTTCTTCTTAATACAGAGATATGTGATCGGAAGAAAACGAAAAACAGAGGAGGCAAATTCAGGGACCGGTCCGGGTTTGGTCTCGCAGCCGGCGGCTGCTCAGAATGAATTTTCACGTGTTGATGGGAATCTTAAAGGGTTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGAGACTTGAAAGAAAGAAATCCAAGAATAGCTTTGATCGGAGTGACGGAGAAAGAAATGTTAAGGAAAATCGAAGCAAAAAGTCAGAGTCTGTTCAAGAAATTCCTCTACTTCGAGGAAAATCTTCAACTTCACATGTTAAAATTGCACCGGAAGATGAAGAATCCAGTCGGAATACATCTCCTCCGCCCCCTCCACCGCCCCAGATTAACAACCCTCCGCCATTTACTGGGAATTCTGATCAGTCAGTTGGAAAACCATCGAGTAGTTCAAATCTTTCATTAACAGCACCACCGCAACCGGCGGCAATTCCAGTACCTCCGTCACAATCTCTCATGGCTGTTCCCAACAATAAGAGCTCTGTTCCGCCACCGCCCCCACCGATTCCAGCAAAGACCAATTCAAGTCTGCCGCCGCCGCCACCTCCCATTCCGGCCAAGACCAATTCAAGACCGCCGCCACCACCTATTCAATCCAAGACCAATTCAGCAGCTCCACCTCCCCCTCCTATACCGGCCAAGGCAAATCCGGCAGCACCAGCGCCGCCACCGCCCAAGGCCGGCGGTTCAAAATTGCCCTTAAGGCCTGCACCTCAAAAAGAGGGTAATAAGTCCTCTAGAGAGGGTTCTTCATCAGCCGACAATGGTCAGGTTAAAATGAAGCCCCTGCATTGGGATAAAGTGAACACTGCAAATGCCGATCATTCCATGGTTTGGGACAAAATGAGCGCCGGTTCTTTCAAATTTGATGGGGATCTTATGGAAGCTCTGTTTGGATATGTCGCAACCAACCGGAAATCCCCACGGAGTGAAGCTAGTTCTACAGCAAACGCCGTTGGCCGAAACTCAGGGCCGTCGCAAACTTTCATTCTTGAACCGAAAAAATCTCAGAACATAGCCATTGTGGTCAAGTCCTTGACTATTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGTCAAGGACTCGAAACAGAGATTCTTGAAAAACTCACAAGAATTGCTCTGACTCAAGAAGAAATTTCCCAAATTCTTGCTTACAAAGGAGACCCCCAGCAGCTTGCTGATGCTGAATCTTTCCTTTACCATCTTCTCAAATCGGTTCCATCTGCCTTTGCTCGTTTCAATGCCATGCTTTTCCGACTGAATTTCACTTCGGAGATTCTCCATCTCAAGGAATCTCTAGAAACTCTGGAGTCCGCCTGCAAGCAGCTTAGAACTCGAGGGCTGTTTTTAAAATTGCTTGAAGCAATTCTCAAAGCTGGGAATCGGCTAAATGCAGGAACTGCAAGAGGAAATGCCAGAGCTTTCAACCTTACAGCTCTTCGGAAGCTCTCTGATGTTCGAAGCACTGATGGGAAAACCACTTTGCTTCACTTTGTAGTGCAAGAAGTGATCAGGGCAGAAGGGAAAAAGTGTGTTTTAAACAAGAACAAGAGCTTGAGCCGTAATAGCAGCCATAGCAGTGACAACAGCTTTAGCAGCTTCGAAAATTCGACTGCGAAGGAGGACAGAGTAAAGGAATATATGATGTTGGGACTGCCAGTTGTGGGAGGTCTAAGCGCTGAATTCTCTAATGTAAAGAAAGCGGCAGCGATTGACTTCGAGAGCTTCGTCAAGGCTGGGTCATCTCTGACTAGCCGAACCGCAGAAATCCGGCAGCTCTTAACTCAAATTGGGAACAACGAAGGTGGTTTTGCTAAAGAAATGAGAGGGTTTCTTGAGGCAGCAGAGAATGAGCTGAAGGTGGTGAGAGAAGAACAGACAAAAGTGATGGAGTTAGTGATGAAGACAACAGAGTATTATCAGGCAGGAAGTTCAAAAGATAAAGAAGCAAATCGGCTTCAATTATTCATCATAGTAAAAGATTTCCTAGAAATGGTAGATCGGGTTTGTGTTGAAATTACTCGAGATCTCCAGAGGAGGAGATCATCGGGAGTAAATGTGGGTTCGGGTTCATCACCGGTGAGATCGAAGGCCATCTTCCATAACTTGCCGGAAAATTTTATGTCAGACAAGTCCAGAGGCAGTTCTAGTGATACAGATGATGAATTCTGA 2502 46.88 MDLLLHLQLQPWQLHLFLFFLSVSPVCYCQLSPPQNIETFYPSPFIPQPPSPISPSSSLDHPPSSTSTKTIATAVAVTAVGVALLSTLFFFLIQRYVIGRKRKTEEANSGTGPGLVSQPAAAQNEFSRVDGNLKGFIVDENGLDVIYWKRLERKKSKNSFDRSDGERNVKENRSKKSESVQEIPLLRGKSSTSHVKIAPEDEESSRNTSPPPPPPPQINNPPPFTGNSDQSVGKPSSSSNLSLTAPPQPAAIPVPPSQSLMAVPNNKSSVPPPPPPIPAKTNSSLPPPPPPIPAKTNSRPPPPPIQSKTNSAAPPPPPIPAKANPAAPAPPPPKAGGSKLPLRPAPQKEGNKSSREGSSSADNGQVKMKPLHWDKVNTANADHSMVWDKMSAGSFKFDGDLMEALFGYVATNRKSPRSEASSTANAVGRNSGPSQTFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETEILEKLTRIALTQEEISQILAYKGDPQQLADAESFLYHLLKSVPSAFARFNAMLFRLNFTSEILHLKESLETLESACKQLRTRGLFLKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKKCVLNKNKSLSRNSSHSSDNSFSSFENSTAKEDRVKEYMMLGLPVVGGLSAEFSNVKKAAAIDFESFVKAGSSLTSRTAEIRQLLTQIGNNEGGFAKEMRGFLEAAENELKVVREEQTKVMELVMKTTEYYQAGSSKDKEANRLQLFIIVKDFLEMVDRVCVEITRDLQRRRSSGVNVGSGSSPVRSKAIFHNLPENFMSDKSRGSSSDTDDEF 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36432735 36435317 - ClCG05G024940.1 Cla05g02507 273997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02507 833 PANTHER FORMIN-LIKE PROTEIN 4 12 309 - -
Cla05g02507 833 PANTHER FORMIN-LIKE PROTEIN 4 298 829 - -
Cla05g02507 833 PANTHER FORMIN-RELATED 298 829 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla05g02507 833 PANTHER FORMIN-RELATED 12 309 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla05g02507 833 Coils Coil 536 556 - -
Cla05g02507 833 MobiDBLite consensus disorder prediction 156 182 - -
Cla05g02507 833 Coils Coil 715 742 - -
Cla05g02507 833 MobiDBLite consensus disorder prediction 351 365 - -
Cla05g02507 833 MobiDBLite consensus disorder prediction 206 222 - -
Cla05g02507 833 Gene3D Formin, FH2 domain 378 794 IPR042201 -
Cla05g02507 833 MobiDBLite consensus disorder prediction 413 437 - -
Cla05g02507 833 MobiDBLite consensus disorder prediction 156 370 - -
Cla05g02507 833 SUPERFAMILY Formin homology 2 domain (FH2 domain) 434 789 - -
Cla05g02507 833 Pfam Formin Homology 2 Domain 361 777 IPR015425 -
Cla05g02507 833 MobiDBLite consensus disorder prediction 267 339 - -
Cla05g02507 833 MobiDBLite consensus disorder prediction 223 246 - -
Cla05g02507 833 MobiDBLite consensus disorder prediction 414 437 - -
Cla05g02507 833 ProSiteProfiles Formin homology-2 (FH2) domain profile. 358 802 IPR015425 -
Cla05g02507 833 SMART it6_source 358 791 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02507 Cla-Chr5:36432735 Cla08g00895 Cla-Chr8:21415552 5.28E-23 dispersed
Cla05g02507 Cla-Chr5:36432735 Cla02g01189 Cla-Chr2:25442545 1.73E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02507 - - csv:101208197 1188.33