Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02523 ATGGAAGTTAAGGGAGAAAGAATATTGGGAATAATGGTTCCATTTTTGGCGATGGTGAGCTTAGAAGGTTGCACTATTGCATTAACAATATTGGCTAAAACAGCCATTACTTATGGAATCTCCACTTTCGTTTTTGTTGTGTATACAAACGCCGTTGCTTCCATCATTCTTCTTCCTTATTCCTTCATCTTTCATTACAACCACAGAATGGAATATCAACAATCTTTGTTTTCATTCCCTCTTCTCCTCCGAGTCTTCCTCTTGGGTTTCACAGGGATATGTATATCTCAGAACTTAGCATTTTTGGGCCTAAGTTACAGCTCTCCAATTGTGGTATGCGCAATGGGTCTTATGCTTCCAGCCATTTCCTTCGTACTCTCAATCCTTCTCGGGAGGACAAAAATTGAGTGGAAAAACCCCAACTTTATTACAAAACTAGTTGGGACAGTTATATCAGTTATAGGAGCTACATGTGAAGAGCTTTACCTAGGCCCAGTTGTACGGCAACATCCATCATTTTCTACTACTACACATTTACAGTTCAAACAGAAGCTTTTGGTGTTTACTTCAACCACAGATCGTTGGATTTTGGGTGGCCTTTTATTAGTAGCTGCTACTTTATGTGTCTCAATATGGAACATTATTCAGTTGGGAGTTGTAAAACAGTACTCGCAAGTGATGAAAGTTGCCTCTTTTTATAGTATAGTGGGCACGTTACTCTCAACAATTGTGGGTTACTTTGTTGTCAATGATCCAAGTGCTTGGACAATCAACTCTAGCTTCGACCTCATTCTCATTATTGCAACGGGAACTTTTAGCGGTTTGATTCGAAACCGAGTGCAAATATGGTGCATGCAAAAGAAAGGGCCATATTACGTGCCCATGTTCAAGCCTTTTGGCATTCTTTTTGCCACCTTCTTTGGCGTCACTTTCTTTGGCGACACCTTTCATTACGGAAGTGTGATGGCAGCATTTATAGCTGGAATGGGGTATTTGACAGTAATGTGGGGGCAAATTAACGAAGATCGTGGAGTAGGAGAAGACAAAGATGGTGACAAGAATAATGATGATTTGTCTTCAGCTAAAGTTCCACTTCTTGATGAAGAATCACAAGTGTAA 1119 40.13 MEVKGERILGIMVPFLAMVSLEGCTIALTILAKTAITYGISTFVFVVYTNAVASIILLPYSFIFHYNHRMEYQQSLFSFPLLLRVFLLGFTGICISQNLAFLGLSYSSPIVVCAMGLMLPAISFVLSILLGRTKIEWKNPNFITKLVGTVISVIGATCEELYLGPVVRQHPSFSTTTHLQFKQKLLVFTSTTDRWILGGLLLVAATLCVSIWNIIQLGVVKQYSQVMKVASFYSIVGTLLSTIVGYFVVNDPSAWTINSSFDLILIIATGTFSGLIRNRVQIWCMQKKGPYYVPMFKPFGILFATFFGVTFFGDTFHYGSVMAAFIAGMGYLTVMWGQINEDRGVGEDKDGDKNNDDLSSAKVPLLDEESQV 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36570980 36573572 - ClCG05G025140.1 Cla05g02523 274013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02523 372 MobiDBLite consensus disorder prediction 345 372 - -
Cla05g02523 372 Pfam EamA-like transporter family 27 156 IPR000620 GO:0016020|GO:0016021
Cla05g02523 372 PANTHER WAT1-RELATED PROTEIN 10 369 - -
Cla05g02523 372 PANTHER WAT1-RELATED PROTEIN 10 369 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02523 Cla-Chr5:36570980 Cla09g01836 Cla-Chr9:36022560 5.35E-69 dispersed
Cla10g01375 Cla-Chr10:28801454 Cla05g02523 Cla-Chr5:36570980 6.46E-47 wgd
Cla05g02523 Cla-Chr5:36570980 Cla09g01831 Cla-Chr9:35966189 3.90E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02523 - - csv:101210157 643.654