Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02526 ATGGCATCAAGATCCCCCACAAACTTTTTGGACCTGGCTTCTGGAGATTTACTGGATGTCCCTCGTACACCCAGGTCCCTGCCACGGGTAATGACTGTTCCTGGAATTATTTCTGAATTGGATGATTATGGAAGTAATGATGGAGATTCGGAGTCTTCATCTGTGTACCGTGAGAGGAAAATCATAGTTGCGAATATGTTGCCCTTGCACGCTAAAAAAGATGGGGAATCTGGCAAATGGTGCTTCAGTTTAGATGAGGATTCAATTTTATTGCAGCTAAAGAATGGGTTTTCGCCTGAGATGGAGGTTATATACATTGGTTCCCTCAAGGTTGAAATCGACGCCAGCGAACAGGAAGAGGTTGCTCAGAAGCTGTTCGACAATTTTAATTTTGTACCTACATTTCTTCCTTCTGATCTCCAAAAAAACTTTTATCTTGGGTTTTGCAAACAGCAGCTTTGGCCCTTATTCCATTACATGCTACCCATGTGCCCAGAGCACGGTGATCGCTTCGATCGGCAGCTTTGGCAAGCCTATGTTTCTGCGAATAAAATGTTTGCCGACAAGGTGATGGAAATCATCAATCCTGAGGAAGATTCTATTTGGGTTCATGATTATCATTTAATGGTTCTTCCAACGTTCCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTTCTGCATAGCCCGTTTCCATCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGCCTGTTAAACTGTGATTTACTTGGTTTTCATACGTTTGATTATGCACGTCACTTCCTCTCATGCTGCAGCAGAATGTTGGGCTTGGACTATGAATCTAAGCGGGGACATATTGGACTGGATTATTATGGTCGCACGGTATATATCAAAATTCTGCCTGTAGGAATTCACATGGGTCGGCTGGAATCAGTGATGAATCTTCCATCTACATTTGCTAAAGTCAAAGAAATTCGAGATCAGTTCATGGGGAAGAAACTAATACTTGGTATTGATGACATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTCGCTGTGGAACAGCTTTTACGGCAACATCATGAGTTGCGGGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCAGGAAAAGATGTACATGAAGCTCAGAAGGAAACCTATTTGGCTGCTGAAAGGATCAATCAAGCTTACGGTTCAAATAACTACAAACCAGTAATTCTGATTGATCGCCCAGTTCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTCTGCAGGCAAGGAACTCCTCTTATGGATGAGGCTATGGGCTTACAAATTGGTTCTCCTCGGACGAGTATGCTTGTAGTGTCTGAGTTTATTGGTTGCTCGCCCTCTTTAAGTGGAGCAATCAGGGTTAACCCTTGGGACATTGATGCTGTTGCCGATGCCTTGGAACTAGCCATAACAATACCGGAGTCAGAGAAGCAGCTGCGGCATGAAAAACATTATCGATATGTCAGTTCCCACGATATAGGATATTGGTCTCGTAGTTTTATGCAAGATTTAGACAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGGATTGGCTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACTATTGATCACATTGTCTCAGCTTATAAAAGAACTCATAGAAGAGCGATATTTTTGGATTACGATGGCACTATCATTTCACAAAGCTCTATAATTAAGACACCAAGCCCTGAAGTTATCTCTGTCTTGACTACGCTTTGCAATGACCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTCAGTGGTTTGCGTCTTGTGAGATGTTGGGGATTGCAGCAGAACATGGGTACTTCATAAGGTGGGGTGGAACTTCAGAATGGGAAACCAGTCCATTGTCTTCTGATCTGGATTGGATTAAAATTGTGGAGCCAGTGATGAGATTATATACCGAAGCAACAGATGGCTCGTGCATAGAACCCAAAGAGAGTGCTTTAGTCTGGCATCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCCAAGGAATTGCTGGACCATCTAGAAAATGTACTTGCCAACGAACCGGCCGTTGTTAAAAGGGGCCAACATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCGAGAATGGTAGATAGTGGAAGACCACCTGATTTCGTTATGTGCATTGGAGATGATCGATCAGATGAAGATATGTTTGAGAGCATATTAAGCACTGTCTCCAGTCCCTCACTGCCTTCCGCTCCAGAAATTTTTGCCTGTACTGTTGGGCGAAAGCCAAGCAAGGCCAAGTTTTACCTTGATGATACTTCCGACGTCGTGAAATTGCTGCAATGCCTTGCCTCTTCGATTTGGTGGAAGCCATACAAGTTGAAGAAGGTAGTGAATGATCATTCTCTCAATCCACACTCATACTTTGCTTCTTTCAAAGGATCCTCTGTGAGAATTACGTTTGGAGTTTGCGGTAAATTACAGCTTCTTATCGTTGAAAGCCTTATGAGTTGTATTTATTGTGTGCGTAATGATATGTTTGTAACTTGGCTTGGAATGTTAGAAGGGGATTTTGATCACAACGTCGAAGAGCTAAGCGCATTCAACCGAAGTGGGAAGGAGGAATCCGACACAAGCTTGAACATATCTTCAGATCCAAACTCTCTGTACTCCCCATCCCAGATCTCTCCAAAAACTCAGCTTCCGCCGGGACTCAATCATGAATCCCTTCTCTTCAGGGACGCGTCTCAGGTCAGCTTCCAACCGCACTGTACTCATTTTCGCAGATCACTTTTCTACTATTTCTATTCTTATTGGTTCCGGTTGTTGTTTTTGCACCATTTTCCGCTTTCTTCTGGTTTTCAGAATGGAATTCTTGCGGACATGATTCGGGCCATTCGCGCTTGCAAAACGGCAGCTGAAGAACGTGCGGTAATTCGAAAAGAGTGTGCTGCTATTCGAGCTGCAATTGATGAGAATGATCATGACTATAGGCATCGAAACCTTGCGAAGCTCATGTTCATTCACATGCTTGGTTATCCCACACACTTTGGTCAAATGGAATGCTTGAAGTTGATTGCATCCGCTGGCTTCCCAGAAAAGAGAATTGGATATCTTGGCCTCATGTTACTTCTCGATGAAAGACAAGAAGTTCTGATGTTGGTCACCAACTCATTAAAACAAGATCTCAACCACTCAAACCAGTATATCGTAGGACTTGCTCTTTGTGCTTTAGGAAATATTTGTTCAGCTGAAATGGCTCGTGATCTTGCACCAGAAGTTGAAAGACTGTTACAGTTTCGAGATCCAAACATTAGGAAGAAAGCAGCATTGTGTTCAATTAGGATTATAAGGAAAGTACCAGACCTTGCAGAAAATTTTGTTAACCCTGCTGCCTCCTTACTGAAAGAAAAGCACCATGGGGTTATGATAACAGGAGTTCAACTGTGTACAGAGCTTTGCAAACACAGTCCAGAAGCCCTTGAATATTTTCGAAAGGTATTTTACCATGCCTCTATTGTTTTACATGTTTTTTGCTGCATGAATTGTTCATCTTGTCCTTCCGATCTTGAGGCCATAGTCAAGACACTAAAGGATTTGGTTAATAGTCCATATGCCCCTGAGTATGATATTGCTGGAATAACAGACCCATTTCTCCACATCCGGATGCTTAAATTTTTGCGTGTCTTGGGCCAGGGAGATGCAGATGCTAGCGACTGCATGAATGATATACTTGCACAGGTGGCAACAAAAACTGAATCAAACAAAAATGCAGGGAATGCTATTCTATACGAATGTGTTGAAACTATTATGAGTATAGAAGATAGTGGCGGCTTACGTGTACTTGCTATCAATATCTTGGGAAGATTCTTGTCTAATCGTGATAACAATATCAGATATGTAGCATTGAACATGCTTATGAAGGCTATCACAGTAGATGGTCAAGCAGTGCAGAGACATCGGACAACTATCTTGGAATGTGTAAAGGATTCAGATGCTTCAATCCGGAAAAGGGCTCTTGAACTTGTTTACCTTCTAGTGAATGAGAGCAACGTCAAGCCTCTGACCAAAGAGCTTATTGAATACCTGGAAGTTGCGGATCAAGAATTTAAGGGAGATCTTACTGCAAAAATTTGCTCAATTGTTGCAAAGTACTCCCCAGAGAAAATATGGTACATTGATCAGATGCTGAAGGTTCTCTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGCATGCCCTCATTGTCGTGATAAGCAATGCATCTGACCTCCATGGGTATACTGTAAGGGCCTTGTACAGAGCATTTCAGATATCAAGTGAGCAGGAAAGTCTTGTTCGAGTGGCAGTTTGGTGCATTGGTGAATATGGCGACATGTTGGTCAATAATATTGGAATGCTTGATATAGAGGATCCCATAGTTGTAACAGAATCTGATGCTGTGGATGTTGTGGAAACTGCTATCAAACGCCATGACTCAGATCTTACCACCAAATCAATGGCCATGATTGCTTTGCTGAAGCTCTCTTCTCGTTTCCCATCATGTTCAGAGAGAATCAACCATTTAATTGTTCAATATAAAGGAAGCCTCGTGCTTGAATTGCAGCAAAGATCCATCGAATTCAATTCCATCATTGCAAGTCATCAGAATATGAGGTATGTATTAGCGTGGTCTGTGTTGGTTGAAAGAATGCCAGTTTTGGATGAGGCAACATTCATTGGAAAAAGGGCTGGTACTATTCCAGCATCAGTATCGACTTCCAATGGGGCTGCAATTAACCTTCCAAATGGAGTTTCCAAATCTGCTGCTCCTCTTGTTGATTTACTTGACCTAAGTTCGGACGATGTTCCTGTGCCTAGCTCTTCTGGTAGTGATTTTATTCAGGATCTTCTTGGGCTTGATTTGTCCGCAGCTCCAGAGCAATCTGCAAGCAACAAGTATCAGTTCTCAAGAGTGAAGTCCGGAAGCAATCCAGCTCCAACAAGTGGAACTGATGTTCTATTGGATCTTTTGTCTATTGGAACGACACCACCTGTACAGAGTACTGCATCTGCAACTGACATATTATCCAATCAAGAAAAATCACCTACTTCTCAATTGGATGGACTCTCCTCTCTTTCATCTCTTTCAGCAAGCAAATCTCCTGCTGCTGTATCCAGTCCTACAATCGATTTGTTGGGTGGATTGGCCCCTAACGTGGCAAGTGCAGGTTGTAAACTTGTCATTGATGAGAATGGTTCAGTTTATCCATCTATAGTTGCATACGAGAGTGGATCACTGAGAATAACTTTTGACTTCTCGAAGACAGCTGGGAGCCCACAGACAACGTTTATCCTTGCCACATTTAAGAATCTATCTCCTAATGTCTATTCAAATTTTATTTTCCAGGCGGCAGTTCCAAAGGTAAAAAGTGATATCAACCACATATTGTCTTTGTTTATTTTAAAAAAAACAAAATCATCTGTAAGTGTTGGTTTTTGGAAGGCTGTGATTGTGAAGTCGCCTTATTTTATAGAATCTAGCCCCATATGCCTCTTGAACTATATTTATAGGTTTGGATGTCTAGGCTCAGGCTATGATATTTTGCCCCTTTATGTGGACTTGTCATATGCGCTTGTTGTTGTTGACTTATTGTACATCCACATGCATGAAATAGAATATTCAAATTAG 5838 42.12 MASRSPTNFLDLASGDLLDVPRTPRSLPRVMTVPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPLHAKKDGESGKWCFSLDEDSILLQLKNGFSPEMEVIYIGSLKVEIDASEQEEVAQKLFDNFNFVPTFLPSDLQKNFYLGFCKQQLWPLFHYMLPMCPEHGDRFDRQLWQAYVSANKMFADKVMEIINPEEDSIWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTFAKVKEIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQHHELRGKIVLVQIVNPARGSGKDVHEAQKETYLAAERINQAYGSNNYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPLMDEAMGLQIGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITIPESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLDRACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGQWFASCEMLGIAAEHGYFIRWGGTSEWETSPLSSDLDWIKIVEPVMRLYTEATDGSCIEPKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQCLASSIWWKPYKLKKVVNDHSLNPHSYFASFKGSSVRITFGVCGKLQLLIVESLMSCIYCVRNDMFVTWLGMLEGDFDHNVEELSAFNRSGKEESDTSLNISSDPNSLYSPSQISPKTQLPPGLNHESLLFRDASQVSFQPHCTHFRRSLFYYFYSYWFRLLFLHHFPLSSGFQNGILADMIRAIRACKTAAEERAVIRKECAAIRAAIDENDHDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIRKVPDLAENFVNPAASLLKEKHHGVMITGVQLCTELCKHSPEALEYFRKVFYHASIVLHVFCCMNCSSCPSDLEAIVKTLKDLVNSPYAPEYDIAGITDPFLHIRMLKFLRVLGQGDADASDCMNDILAQVATKTESNKNAGNAILYECVETIMSIEDSGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAITVDGQAVQRHRTTILECVKDSDASIRKRALELVYLLVNESNVKPLTKELIEYLEVADQEFKGDLTAKICSIVAKYSPEKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAFQISSEQESLVRVAVWCIGEYGDMLVNNIGMLDIEDPIVVTESDAVDVVETAIKRHDSDLTTKSMAMIALLKLSSRFPSCSERINHLIVQYKGSLVLELQQRSIEFNSIIASHQNMRYVLAWSVLVERMPVLDEATFIGKRAGTIPASVSTSNGAAINLPNGVSKSAAPLVDLLDLSSDDVPVPSSSGSDFIQDLLGLDLSAAPEQSASNKYQFSRVKSGSNPAPTSGTDVLLDLLSIGTTPPVQSTASATDILSNQEKSPTSQLDGLSSLSSLSASKSPAAVSSPTIDLLGGLAPNVASAGCKLVIDENGSVYPSIVAYESGSLRITFDFSKTAGSPQTTFILATFKNLSPNVYSNFIFQAAVPKVKSDINHILSLFILKKTKSSVSVGFWKAVIVKSPYFIESSPICLLNYIYRFGCLGSGYDILPLYVDLSYALVVVDLLYIHMHEIEYSN 1945
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36613469 36638579 - ClCG05G025180.2 Cla05g02526 274016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02526 1945 MobiDBLite consensus disorder prediction 1737 1758 - -
Cla05g02526 1945 SUPERFAMILY ARM repeat 1029 1623 IPR016024 -
Cla05g02526 1945 TIGRFAM T6PP: trehalose-phosphatase 589 839 IPR003337 GO:0003824|GO:0005992
Cla05g02526 1945 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Cla05g02526 1945 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 548 - -
Cla05g02526 1945 SMART alpha_adaptinc2 1800 1898 IPR008152 GO:0006886|GO:0016192
Cla05g02526 1945 Gene3D Glycogen Phosphorylase B; 52 311 - -
Cla05g02526 1945 CDD HAD_TPP 592 833 - -
Cla05g02526 1945 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 843 IPR001830 GO:0003824|GO:0005992
Cla05g02526 1945 Gene3D - 590 708 IPR023214 -
Cla05g02526 1945 Gene3D - 720 844 IPR023214 -
Cla05g02526 1945 Gene3D - 1802 1866 - -
Cla05g02526 1945 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 793 IPR006379 -
Cla05g02526 1945 Pfam Adaptin C-terminal domain 1806 1857 IPR008152 GO:0006886|GO:0016192
Cla05g02526 1945 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 1803 1927 IPR008153 -
Cla05g02526 1945 Pfam Adaptin N terminal region 1030 1603 IPR002553 GO:0006886|GO:0016192|GO:0030117
Cla05g02526 1945 SUPERFAMILY Clathrin adaptor appendage domain 1808 1858 IPR013041 -
Cla05g02526 1945 Gene3D Glycogen Phosphorylase B; 312 528 - -
Cla05g02526 1945 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824|GO:0005992
Cla05g02526 1945 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0003824|GO:0005992
Cla05g02526 1945 Gene3D - 1005 1624 IPR011989 -
Cla05g02526 1945 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 843 - -
Cla05g02526 1945 SUPERFAMILY HAD-like 591 839 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02336 Cla-Chr1:37151668 Cla05g02526 Cla-Chr5:36613469 0 dispersed
Cla05g02526 Cla-Chr5:36613469 Cla10g00141 Cla-Chr10:1490923 0 dispersed
Cla02g02121 Cla-Chr2:36255984 Cla05g02526 Cla-Chr5:36613469 3.41E-64 transposed
Cla04g01083 Cla-Chr4:26018509 Cla05g02526 Cla-Chr5:36613469 3.02E-28 transposed
Cla11g01569 Cla-Chr11:29388337 Cla05g02526 Cla-Chr5:36613469 1.68E-15 transposed
Cla05g02526 Cla-Chr5:36613469 Cla06g01651 Cla-Chr6:30009658 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02526 K16055 - csv:101212688 1669.44