Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02527 ATGGATCTGGAAAGTGGAGTTGTTAGTGAAAAGAATGCGAAGAAGGATTCATGGAAGACGGTTTTGTTGATGGCTTATCAGAGTCTTGGGGTTGTTTATGGGGAGTTGGGCACTTCGCCTTTATATGTCTATAAGAACACTTTTGCAGAAGAAGATATCAATCACACCAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTGACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCTGATGATAATGGGGAGGGAGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCCCGAGTTAGCTCATTGCCCAATACCCAGTTGGCTGATTCTGAACTCACCGAGTACAAGATGAATGTCCTTGGTCCACCATCTCAACAAAGTTTTGGATTCAAACTCAAATCAGCACTAGAAAAGCGTCGTGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGACTTGTATGGTGATAGGGGATGGCATCTTAACACCGGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTCGAACATACCATGGCGAAAGAGCATCACCAATATACAGTAATCCCAATTGCATGCGTCGTACTGATATGCTTGTTTGCGCTTCAACACTACGGCACTCACAGGATCGGCTTCTTGTTTGCTCCCATAGTGATAGTCTGGCTAGTGTGTATTAGTGCCATTGGCCTGTACAATATTATTCACTGGAATCCGGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAGTTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGTTCAGAGGCGATGTTTGCTGACCTTGGGCATTTTTCTCAGTTGTCAATTAAGATTGCTTTCACTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTGTCCCAACATCATCCTCCAAATGATCATTCAATTGGGTTTTATGTATCTGTTCCTGATAAATTGAAGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTTAAAATTATTCATACGTCCTCAAAAGTTCACGGTCAGATCTATATCCCAGAGGTCAATTGGATTTTGATGCTCTTGTGCTTGGCTGTTACCTTAGGTTTCAGAGACACAAAGCGCCTGGGCCATGCTTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACCTGCTTGATGTCGCTTGTTATCGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGTTTCATCTTCTTTTTTGGCACCATTGAATCTCTCTACTTCTCAGCTTCTCTTATAAAATTTCTTGAAGGAGCTTGGGTTCCCATCGCAATTTCTCTTGTGTTCCTGATCGTTATGTATGTCTGGCACTATGGTACTCTGAAGAAGTTTGAATTCGACATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTTGGTCGCAACTTAGGCATTGTAAGAGTCCGTGGGATTGGCGTCATACAAACGGAGCTTGTTTCGGGTATCCCGGGTATCTTCACCCACTTTGTCACCAATATTCCCGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATATGTCCCAGTGCCACATGTTAGACCAGAGGAACGGTTTCTAATTGGTCGTATTGATACGAGTGAATACAGACTCTACCGGTGCATTGTGCGATATGGGTATCGAGATGTTCACAAAGACGATGTAGAGTTCGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGACTGCAGTGTCCGGTGATTCTAAACCGGACTTTGATAAAGATGGTGAAAAGATGTCAGTCGTCGGGACATCTTCTACCCATGAAGATAGGATGCAGATGGCTGAGACCGATAATGAAGAAGACTCTGAAGAACTGTACCAAGCTTCAGATACAAGGGAAATAAGGTCACCAGCTCCAGTTCAATTGAGAAAAAGAGTACGCTTCATTGTACCCGAGAGCCCGGAAATCAACACTAATGCAATGGAAGAATTACAAGAGCTAAGGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCGCACATGAAAGCAAAACAAGGATCGAGCATGCTGAAAAGGGTGTCGATCGACTTCATTTACGAGTTCTTAAGGAAGAACAGCAGAGAAGCCGACTTCCCAGTAGGTTTATCACATTCATCATCAACCCTTGAGGTGGGTATGATGTATCTTGTTTAA 2349 43.04 MDLESGVVSEKNAKKDSWKTVLLMAYQSLGVVYGELGTSPLYVYKNTFAEEDINHTKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSQQSFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYTVIPIACVVLICLFALQHYGTHRIGFLFAPIVIVWLVCISAIGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQHHPPNDHSIGFYVSVPDKLKWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISLVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSFGRNLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIDTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGTAVSGDSKPDFDKDGEKMSVVGTSSTHEDRMQMAETDNEEDSEELYQASDTREIRSPAPVQLRKRVRFIVPESPEINTNAMEELQELREAREGGVAYILGRSHMKAKQGSSMLKRVSIDFIYEFLRKNSREADFPVGLSHSSSTLEVGMMYLV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36651067 36656867 - ClCG05G025200.1 Cla05g02527 274017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02527 782 TIGRFAM kup: potassium uptake protein 24 780 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla05g02527 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 781 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla05g02527 782 PANTHER POTASSIUM TRANSPORTER 6 1 781 - -
Cla05g02527 782 MobiDBLite consensus disorder prediction 631 677 - -
Cla05g02527 782 Pfam K+ potassium transporter 26 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02527 Cla-Chr5:36651067 Cla07g00469 Cla-Chr7:6536596 0 dispersed
Cla07g01149 Cla-Chr7:28423171 Cla05g02527 Cla-Chr5:36651067 0 transposed
Cla09g00571 Cla-Chr9:5257188 Cla05g02527 Cla-Chr5:36651067 3.68E-49 transposed
Cla10g01372 Cla-Chr10:28768947 Cla05g02527 Cla-Chr5:36651067 0 wgd
Cla05g02527 Cla-Chr5:36651067 Cla09g01844 Cla-Chr9:36099892 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02527 K03549 - csv:101212925 1493.79