Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02599 ATGTTTAACCTTGATCGGATGATGCATAGCATTTCCATCTGGGTGGTTTCTGTATTCTTGCTGTTGGTTTTGTCTTTCCTACTGCTTATTAAAACAAAGACACACAACAAGAAACTTCCTCCAGGCCCTCCAAAGCTTCCTCTGTTGGGTCACTTGCACCTTATTGGCTCCCTCCCTCATCGCTCATTGTGGAAACTTTCAAGAAAATATGGCCCCATCATGCTCCTAAGACTCGGTTCTGATCCAACCATCGTAATTTCCTCTGCTGCTGCCGCCAGAGAGGTGTTACAAGTGCATGATCTTGTTTGTTGTAGTCGACCTCTCTTAGCCGCTAGTGCAAGATTTTCATACAACTTCTTAGACATAGGTTTATCTCCATATACTGATCATTGGAGAGAAGTTCGTAAGATTTCTGTTCTTGAGCTCTTCAACGCTCGGCGAGTGCAGTCGTTTCACTTGATCAGAGAAGAAGTCAGTCTGCTGTTAAAGACAATCGCTCAAGCTTCATCTCTTGCAATTCCAGTTGATCTGAGTGAGGAATCATATACTCTCACTGCAAATATGATCACACGCATAGCTTTTGGGAAGAGGTTTGGAGGGGGTGAACTAGATAATGGAAATTTTCAGCAGCTTATCCGTAGAGCAATAGCAGCATTAGGAAGCTTCTCCATGACTGACTTCTTTCCTAGTGTGGGTTGGATTATTGATCGACTCAGTGGCGTTAACGGGAGGCTGGAGAAGAGCTTTGCTGAGCTGGATGCTTTTTTCCGACAAGTAGTCGAAGGGACTTCTCAGAATGAAGAAAATATTGTCGATGTTTTGTTGGAAATGGAGAGAGATCACTCTGAACTTGATGATGCCTTACAACTAACTAGAGATTGCATCAAGGCAATTATCATGGATATATTTATAGCTGGAGTGAACCCTGGAGCAGGCACCATTATTTGGGTAATGGCAGAGCTAGTTAAGAATCCAAAGGTAACGAAGAAGCTACAACATGAGATCAGAAGCTACATAAAAGAAGATCTGGTAAAGGAGAACGACCTTGAAAAACTTCAATATCTAAAAATGGTGGTGAAAGAGGTTCTAAGGTTACATCCGCCTGCCCCACTTCTACTCCCAAGAGAAACCATGACTCATTTTAAGCTCAAGGGTTACGATATTGATCCCAAAACTCATCTTCATATCAATGTATGGGCGATCGGGCGAGATCCAAATTATTGGACTTGTCCAGAAGAATTCTTACCCGAGAGATTTATGGGAAGCAATATTGATTACAAAGGGCAGAATTTCGAGTTATTACCATTTGGAGCTGGTCGAAGAATATGTCCTGGTATGAACATGGGGATTGTCACGATGGAGTTGGCTTTGGCTAATCTATTGCTACAATTTAACTGGAAATTGCCAGATGGGATGAAAGAAGAAGATATGGACATGGAAGAGGATGCTGGTCTAACCATTGCAAAGAAATCACCTCTTAAACTCATCCCAATTGCTTATAGACCTTAA 1509 42.15 MFNLDRMMHSISIWVVSVFLLLVLSFLLLIKTKTHNKKLPPGPPKLPLLGHLHLIGSLPHRSLWKLSRKYGPIMLLRLGSDPTIVISSAAAAREVLQVHDLVCCSRPLLAASARFSYNFLDIGLSPYTDHWREVRKISVLELFNARRVQSFHLIREEVSLLLKTIAQASSLAIPVDLSEESYTLTANMITRIAFGKRFGGGELDNGNFQQLIRRAIAALGSFSMTDFFPSVGWIIDRLSGVNGRLEKSFAELDAFFRQVVEGTSQNEENIVDVLLEMERDHSELDDALQLTRDCIKAIIMDIFIAGVNPGAGTIIWVMAELVKNPKVTKKLQHEIRSYIKEDLVKENDLEKLQYLKMVVKEVLRLHPPAPLLLPRETMTHFKLKGYDIDPKTHLHINVWAIGRDPNYWTCPEEFLPERFMGSNIDYKGQNFELLPFGAGRRICPGMNMGIVTMELALANLLLQFNWKLPDGMKEEDMDMEEDAGLTIAKKSPLKLIPIAYRP 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37236335 37240817 - ClCG05G025910.1 Cla05g02599 274089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02599 502 PANTHER CYTOCHROME P450 71B16-RELATED 10 499 - -
Cla05g02599 502 Gene3D Cytochrome P450 28 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 PANTHER CYTOCHROME P450 71B11-RELATED 10 499 - -
Cla05g02599 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cla05g02599 502 Pfam Cytochrome P450 40 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02599 502 SUPERFAMILY Cytochrome P450 40 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02599 Cla-Chr5:37236335 Cla05g02608 Cla-Chr5:37303566 0 dispersed
Cla05g02599 Cla-Chr5:37236335 Cla05g02601 Cla-Chr5:37242515 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02599 - K01773 csv:101216707 625.935